RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
RPGRIP1-207ENST00000555322 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
RPGRIP1-207ENST00000555322 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
RPGRIP1-207ENST00000555322 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
RPGRIP1-207ENST00000555322 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
RPGRIP1-207ENST00000555322 NACADO15069 1562 aa16.71■□□□□ 0.27
RPGRIP1-207ENST00000555322 ABCC9O60706 1549 aa16.65■□□□□ 0.26
RPGRIP1-207ENST00000555322 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
RPGRIP1-207ENST00000555322 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
RPGRIP1-207ENST00000555322 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
RPGRIP1-207ENST00000555322 SCRIBQ14160 1630 aa16.4■□□□□ 0.22
RPGRIP1-207ENST00000555322 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
RPGRIP1-207ENST00000555322 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
RPGRIP1-207ENST00000555322 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
RPGRIP1-207ENST00000555322 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
RPGRIP1-207ENST00000555322 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
RPGRIP1-207ENST00000555322 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
RPGRIP1-207ENST00000555322 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
RPGRIP1-207ENST00000555322 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
RPGRIP1-207ENST00000555322 WIZO95785 1651 aa15.71■□□□□ 0.11
RPGRIP1-207ENST00000555322 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
RPGRIP1-207ENST00000555322 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
RPGRIP1-207ENST00000555322 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPGRIP1-207ENST00000555322 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
RPGRIP1-207ENST00000555322 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
RPGRIP1-207ENST00000555322 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
RPGRIP1-207ENST00000555322 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
RPGRIP1-207ENST00000555322 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
RPGRIP1-207ENST00000555322 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
RPGRIP1-207ENST00000555322 BAZ1BQ9UIG0 1483 aaKnown RBP15.41■□□□□ 0.06
RPGRIP1-207ENST00000555322 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
RPGRIP1-207ENST00000555322 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
RPGRIP1-207ENST00000555322 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
RPGRIP1-207ENST00000555322 ABCC8Q09428 1581 aa15.08■□□□□ 0
RPGRIP1-207ENST00000555322 PRDM2Q13029 1718 aa15.07■□□□□ 0
RPGRIP1-207ENST00000555322 CFTRP13569 1480 aa15.06■□□□□ 0
RPGRIP1-207ENST00000555322 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
RPGRIP1-207ENST00000555322 EEA1Q15075 1411 aa15.03■□□□□ -0
RPGRIP1-207ENST00000555322 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
RPGRIP1-207ENST00000555322 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
RPGRIP1-207ENST00000555322 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
RPGRIP1-207ENST00000555322 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
RPGRIP1-207ENST00000555322 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
RPGRIP1-207ENST00000555322 CUX1P39880 1505 aa14.83□□□□□ -0.03
RPGRIP1-207ENST00000555322 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.03
RPGRIP1-207ENST00000555322 SOGA1O94964 1423 aa14.82□□□□□ -0.04
RPGRIP1-207ENST00000555322 KIF21BO75037 1637 aa14.8□□□□□ -0.04
RPGRIP1-207ENST00000555322 FAM9AQ8IZU1 332 aaPredicted RBP14.77□□□□□ -0.04
RPGRIP1-207ENST00000555322 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
RPGRIP1-207ENST00000555322 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
RPGRIP1-207ENST00000555322 GOLGA3Q08378 1498 aa14.75□□□□□ -0.05
RPGRIP1-207ENST00000555322 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
RPGRIP1-207ENST00000555322 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
RPGRIP1-207ENST00000555322 RUSC2Q8N2Y8 1516 aa14.72□□□□□ -0.05
RPGRIP1-207ENST00000555322 TNIKQ9UKE5 1360 aa14.71□□□□□ -0.05
RPGRIP1-207ENST00000555322 PDS5BQ9NTI5 1447 aa14.69□□□□□ -0.06
RPGRIP1-207ENST00000555322 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
RPGRIP1-207ENST00000555322 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
RPGRIP1-207ENST00000555322 NESP48681 1621 aa14.65□□□□□ -0.06
RPGRIP1-207ENST00000555322 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
RPGRIP1-207ENST00000555322 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
RPGRIP1-207ENST00000555322 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
RPGRIP1-207ENST00000555322 CEP162Q5TB80 1403 aa14.6□□□□□ -0.07
RPGRIP1-207ENST00000555322 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
RPGRIP1-207ENST00000555322 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
RPGRIP1-207ENST00000555322 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
RPGRIP1-207ENST00000555322 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
RPGRIP1-207ENST00000555322 CUX2O14529 1486 aa14.56□□□□□ -0.08
RPGRIP1-207ENST00000555322 WDR97A6NE52 1622 aa14.56□□□□□ -0.08
RPGRIP1-207ENST00000555322 RAPGEF2Q9Y4G8 1499 aa14.55□□□□□ -0.08
RPGRIP1-207ENST00000555322 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
RPGRIP1-207ENST00000555322 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
RPGRIP1-207ENST00000555322 CUL7Q14999 1698 aa14.5□□□□□ -0.09
RPGRIP1-207ENST00000555322 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
RPGRIP1-207ENST00000555322 IGF1RP08069 1367 aa14.48□□□□□ -0.09
RPGRIP1-207ENST00000555322 ABCA5Q8WWZ7 1642 aa14.47□□□□□ -0.09
RPGRIP1-207ENST00000555322 CLIP1P30622 1438 aa14.46□□□□□ -0.09
RPGRIP1-207ENST00000555322 WDR62O43379 1518 aa14.46□□□□□ -0.1
RPGRIP1-207ENST00000555322 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
RPGRIP1-207ENST00000555322 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
RPGRIP1-207ENST00000555322 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
RPGRIP1-207ENST00000555322 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
RPGRIP1-207ENST00000555322 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
RPGRIP1-207ENST00000555322 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
RPGRIP1-207ENST00000555322 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
RPGRIP1-207ENST00000555322 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
RPGRIP1-207ENST00000555322 THOC2Q8NI27 1593 aaKnown RBP14.35□□□□□ -0.11
RPGRIP1-207ENST00000555322 PCGF6Q9BYE7 350 aa14.33□□□□□ -0.11
RPGRIP1-207ENST00000555322 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
RPGRIP1-207ENST00000555322 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
RPGRIP1-207ENST00000555322 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
RPGRIP1-207ENST00000555322 CTTNBP2Q8WZ74 1663 aa14.31□□□□□ -0.12
RPGRIP1-207ENST00000555322 EFCAB5A4FU69 1503 aa14.3□□□□□ -0.12
RPGRIP1-207ENST00000555322 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
RPGRIP1-207ENST00000555322 GRIN2BQ13224 1484 aa14.27□□□□□ -0.13
RPGRIP1-207ENST00000555322 ADAMTS12P58397 1594 aa14.27□□□□□ -0.13
RPGRIP1-207ENST00000555322 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
RPGRIP1-207ENST00000555322 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
RPGRIP1-207ENST00000555322 MAP3K1Q13233 1512 aa14.22□□□□□ -0.13
RPGRIP1-207ENST00000555322 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms