RNA–Protein interactions for RNA: ENST00000555279.5

LRFN5-205, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

TSL 4

Gene LRFN5, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-205ENST00000555279 NISCHQ9Y2I1 1504 aa54.84■■■■■ 6.37
LRFN5-205ENST00000555279 CCDC180Q9P1Z9 1646 aa48.89■■■■■ 5.42
LRFN5-205ENST00000555279 ABCC9O60706 1549 aa47.69■■■■■ 5.22
LRFN5-205ENST00000555279 RB1CC1Q8TDY2 1594 aa45.95■■■■■ 4.95
LRFN5-205ENST00000555279 NACADO15069 1562 aa45.88■■■■■ 4.93
LRFN5-205ENST00000555279 ZCCHC6Q5VYS8 1495 aaKnown RBP45.72■■■■■ 4.91
LRFN5-205ENST00000555279 DCAF8L2P0C7V8 631 aa45.67■■■■■ 4.9
LRFN5-205ENST00000555279 MYO15BQ96JP2 1530 aa45.59■■■■■ 4.89
LRFN5-205ENST00000555279 DCAF1Q9Y4B6 1507 aa45.4■■■■■ 4.86
LRFN5-205ENST00000555279 UNC13AQ9UPW8 1703 aa45.03■■■■■ 4.8
LRFN5-205ENST00000555279 BICRAQ9NZM4 1560 aa44.56■■■■■ 4.72
LRFN5-205ENST00000555279 SCRIBQ14160 1630 aa44.55■■■■■ 4.72
LRFN5-205ENST00000555279 PABPN1Q86U42 306 aaKnown RBP eCLIP44.47■■■■■ 4.71
LRFN5-205ENST00000555279 SHROOM4Q9ULL8 1493 aa44.09■■■■■ 4.65
LRFN5-205ENST00000555279 DNAJC5BQ9UF47 199 aa43.66■■■■■ 4.58
LRFN5-205ENST00000555279 EIF4G1Q04637 1599 aaKnown RBP43.37■■■■■ 4.53
LRFN5-205ENST00000555279 CC2D2AQ9P2K1 1620 aa43.21■■■■■ 4.51
LRFN5-205ENST00000555279 CECR2Q9BXF3 1484 aa42.85■■■■■ 4.45
LRFN5-205ENST00000555279 SMARCA4P51532 1647 aa42.62■■■■■ 4.41
LRFN5-205ENST00000555279 BAZ1AQ9NRL2 1556 aaPredicted RBP42.54■■■■■ 4.4
LRFN5-205ENST00000555279 SMARCA2P51531 1590 aa42.31■■■■■ 4.36
LRFN5-205ENST00000555279 ATAD2BQ9ULI0 1458 aa42.3■■■■■ 4.36
LRFN5-205ENST00000555279 MROH2BQ7Z745 1585 aa42.27■■■■■ 4.36
LRFN5-205ENST00000555279 NCAPD3P42695 1498 aa42.26■■■■■ 4.36
LRFN5-205ENST00000555279 PEG3Q9GZU2 1588 aa42.18■■■■■ 4.34
LRFN5-205ENST00000555279 HMGXB3Q12766 1538 aa42.15■■■■■ 4.34
LRFN5-205ENST00000555279 BAZ1BQ9UIG0 1483 aaKnown RBP41.99■■■■■ 4.31
LRFN5-205ENST00000555279 WIZO95785 1651 aa41.87■■■■■ 4.29
LRFN5-205ENST00000555279 RSF1Q96T23 1441 aaPredicted RBP41.74■■■■■ 4.27
LRFN5-205ENST00000555279 TOP2AP11388 1531 aaKnown RBP41.41■■■■■ 4.22
LRFN5-205ENST00000555279 NESP48681 1621 aa41.28■■■■■ 4.2
LRFN5-205ENST00000555279 LAMC3Q9Y6N6 1575 aa41.24■■■■■ 4.19
LRFN5-205ENST00000555279 ERCC6Q03468 1493 aa41.13■■■■■ 4.17
LRFN5-205ENST00000555279 CADPSQ9ULU8 1353 aa41.01■■■■■ 4.16
LRFN5-205ENST00000555279 KIF21AQ7Z4S6 1674 aa40.91■■■■■ 4.14
LRFN5-205ENST00000555279 PDS5BQ9NTI5 1447 aa40.87■■■■■ 4.13
LRFN5-205ENST00000555279 CCDC88BA6NC98 1476 aa40.84■■■■■ 4.13
LRFN5-205ENST00000555279 CFTRP13569 1480 aa40.81■■■■■ 4.12
LRFN5-205ENST00000555279 THOC2Q8NI27 1593 aaKnown RBP40.75■■■■■ 4.11
LRFN5-205ENST00000555279 PRDM2Q13029 1718 aa40.72■■■■■ 4.11
LRFN5-205ENST00000555279 CUX2O14529 1486 aa40.7■■■■■ 4.11
LRFN5-205ENST00000555279 SUPT5HO00267 1087 aaKnown RBP40.61■■■■■ 4.09
LRFN5-205ENST00000555279 FANCD2Q9BXW9 1451 aa40.59■■■■■ 4.09
LRFN5-205ENST00000555279 CEP164Q9UPV0 1460 aa40.58■■■■■ 4.09
LRFN5-205ENST00000555279 MRC2Q9UBG0 1479 aa40.51■■■■■ 4.07
LRFN5-205ENST00000555279 WDR62O43379 1518 aa40.41■■■■■ 4.06
LRFN5-205ENST00000555279 URB2Q14146 1524 aaKnown RBP40.2■■■■■ 4.03
LRFN5-205ENST00000555279 DNMBPQ6XZF7 1577 aa39.96■■■■□ 3.99
LRFN5-205ENST00000555279 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
LRFN5-205ENST00000555279 ABCC8Q09428 1581 aa39.94■■■■□ 3.98
LRFN5-205ENST00000555279 IFT140Q96RY7 1462 aa39.69■■■■□ 3.94
LRFN5-205ENST00000555279 CUX1P39880 1505 aa39.67■■■■□ 3.94
LRFN5-205ENST00000555279 POLA1P09884 1462 aaPredicted RBP39.62■■■■□ 3.93
LRFN5-205ENST00000555279 TARBP1Q13395 1621 aaKnown RBP39.57■■■■□ 3.92
LRFN5-205ENST00000555279 FGD5Q6ZNL6 1462 aa39.53■■■■□ 3.92
LRFN5-205ENST00000555279 ZNF608Q9ULD9 1512 aaPredicted RBP39.5■■■■□ 3.91
LRFN5-205ENST00000555279 EIF4G3O43432 1585 aaKnown RBP39.46■■■■□ 3.91
LRFN5-205ENST00000555279 RAD54L2Q9Y4B4 1467 aa39.41■■■■□ 3.9
LRFN5-205ENST00000555279 BIVM-ERCC5R4GMW8 1640 aa39.4■■■■□ 3.9
LRFN5-205ENST00000555279 SOGA1O94964 1423 aa39.4■■■■□ 3.9
LRFN5-205ENST00000555279 WRNQ14191 1432 aaPredicted RBP eCLIP39.38■■■■□ 3.89
LRFN5-205ENST00000555279 TOP2BQ02880 1626 aa39.36■■■■□ 3.89
LRFN5-205ENST00000555279 SYNJ1O43426 1573 aa39.35■■■■□ 3.89
LRFN5-205ENST00000555279 DNAJC5Q9H3Z4 198 aa39.33■■■■□ 3.89
LRFN5-205ENST00000555279 WDR97A6NE52 1622 aa39.32■■■■□ 3.89
LRFN5-205ENST00000555279 AQRO60306 1485 aaKnown RBP eCLIP39.25■■■■□ 3.87
LRFN5-205ENST00000555279 TDRD9Q8NDG6 1382 aaKnown RBP39.16■■■■□ 3.86
LRFN5-205ENST00000555279 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
LRFN5-205ENST00000555279 ABCA5Q8WWZ7 1642 aa39.06■■■■□ 3.84
LRFN5-205ENST00000555279 PBRM1Q86U86 1689 aa39.05■■■■□ 3.84
LRFN5-205ENST00000555279 CHD1O14646 1710 aa39■■■■□ 3.83
LRFN5-205ENST00000555279 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
LRFN5-205ENST00000555279 GRIN2BQ13224 1484 aa38.98■■■■□ 3.83
LRFN5-205ENST00000555279 SNAPC4Q5SXM2 1469 aa38.95■■■■□ 3.83
LRFN5-205ENST00000555279 MAGI1Q96QZ7 1491 aaPredicted RBP38.91■■■■□ 3.82
LRFN5-205ENST00000555279 OSCARQ8IYS5 282 aa38.9■■■■□ 3.82
LRFN5-205ENST00000555279 SYNJ2O15056 1496 aa38.74■■■■□ 3.79
LRFN5-205ENST00000555279 FBLN2P98095 1184 aa38.73■■■■□ 3.79
LRFN5-205ENST00000555279 ERICH3Q5RHP9 1530 aa38.69■■■■□ 3.78
LRFN5-205ENST00000555279 ADAMTS12P58397 1594 aa38.69■■■■□ 3.78
LRFN5-205ENST00000555279 CHMP7Q8WUX9 453 aaPredicted RBP38.63■■■■□ 3.77
LRFN5-205ENST00000555279 KIF27Q86VH2 1401 aa38.55■■■■□ 3.76
LRFN5-205ENST00000555279 FHAD1B1AJZ9 1412 aa38.52■■■■□ 3.76
LRFN5-205ENST00000555279 CLASP1Q7Z460 1538 aa38.5■■■■□ 3.75
LRFN5-205ENST00000555279 GRIN2AQ12879 1464 aa38.5■■■■□ 3.75
LRFN5-205ENST00000555279 RIMBP3CA6NJZ7 1639 aa38.44■■■■□ 3.74
LRFN5-205ENST00000555279 RIMBP3BA6NNM3 1639 aa38.44■■■■□ 3.74
LRFN5-205ENST00000555279 RIMBP3Q9UFD9 1639 aa38.44■■■■□ 3.74
LRFN5-205ENST00000555279 CUL7Q14999 1698 aa38.41■■■■□ 3.74
LRFN5-205ENST00000555279 ARHGEF11O15085 1522 aa38.4■■■■□ 3.74
LRFN5-205ENST00000555279 TRIM41Q8WV44 630 aa38.35■■■■□ 3.73
LRFN5-205ENST00000555279 CEP170Q5SW79 1584 aa38.34■■■■□ 3.73
LRFN5-205ENST00000555279 IGF1RP08069 1367 aa38.32■■■■□ 3.73
LRFN5-205ENST00000555279 NUP160Q12769 1436 aa38.31■■■■□ 3.72
LRFN5-205ENST00000555279 RUSC2Q8N2Y8 1516 aa38.18■■■■□ 3.7
LRFN5-205ENST00000555279 CARMIL1Q5VZK9 1371 aa38.12■■■■□ 3.69
LRFN5-205ENST00000555279 SHROOM2Q13796 1616 aa38.1■■■■□ 3.69
LRFN5-205ENST00000555279 ARAP1Q96P48 1450 aa38.08■■■■□ 3.69
LRFN5-205ENST00000555279 RAPGEF2Q9Y4G8 1499 aa37.95■■■■□ 3.67
LRFN5-205ENST00000555279 ERCC6L2Q5T890 1561 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms