RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
TRAPPC6B-205ENST00000555269 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
TRAPPC6B-205ENST00000555269 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
TRAPPC6B-205ENST00000555269 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
TRAPPC6B-205ENST00000555269 ABCC9O60706 1549 aa26.48■■□□□ 1.83
TRAPPC6B-205ENST00000555269 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
TRAPPC6B-205ENST00000555269 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
TRAPPC6B-205ENST00000555269 NACADO15069 1562 aa25.21■■□□□ 1.63
TRAPPC6B-205ENST00000555269 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
TRAPPC6B-205ENST00000555269 MYO15BQ96JP2 1530 aa24.99■■□□□ 1.59
TRAPPC6B-205ENST00000555269 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
TRAPPC6B-205ENST00000555269 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
TRAPPC6B-205ENST00000555269 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.54
TRAPPC6B-205ENST00000555269 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.53
TRAPPC6B-205ENST00000555269 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
TRAPPC6B-205ENST00000555269 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
TRAPPC6B-205ENST00000555269 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
TRAPPC6B-205ENST00000555269 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
TRAPPC6B-205ENST00000555269 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
TRAPPC6B-205ENST00000555269 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
TRAPPC6B-205ENST00000555269 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC6B-205ENST00000555269 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC6B-205ENST00000555269 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
TRAPPC6B-205ENST00000555269 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
TRAPPC6B-205ENST00000555269 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
TRAPPC6B-205ENST00000555269 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC6B-205ENST00000555269 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
TRAPPC6B-205ENST00000555269 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
TRAPPC6B-205ENST00000555269 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
TRAPPC6B-205ENST00000555269 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
TRAPPC6B-205ENST00000555269 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
TRAPPC6B-205ENST00000555269 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC6B-205ENST00000555269 WIZO95785 1651 aa23■■□□□ 1.27
TRAPPC6B-205ENST00000555269 NESP48681 1621 aa22.89■■□□□ 1.25
TRAPPC6B-205ENST00000555269 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
TRAPPC6B-205ENST00000555269 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
TRAPPC6B-205ENST00000555269 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
TRAPPC6B-205ENST00000555269 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
TRAPPC6B-205ENST00000555269 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
TRAPPC6B-205ENST00000555269 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
TRAPPC6B-205ENST00000555269 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
TRAPPC6B-205ENST00000555269 CUX2O14529 1486 aa22.5■■□□□ 1.19
TRAPPC6B-205ENST00000555269 CFTRP13569 1480 aa22.5■■□□□ 1.19
TRAPPC6B-205ENST00000555269 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
TRAPPC6B-205ENST00000555269 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
TRAPPC6B-205ENST00000555269 THOC2Q8NI27 1593 aaKnown RBP22.4■■□□□ 1.18
TRAPPC6B-205ENST00000555269 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
TRAPPC6B-205ENST00000555269 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
TRAPPC6B-205ENST00000555269 WDR62O43379 1518 aa22.23■■□□□ 1.15
TRAPPC6B-205ENST00000555269 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
TRAPPC6B-205ENST00000555269 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
TRAPPC6B-205ENST00000555269 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
TRAPPC6B-205ENST00000555269 FOXD1Q16676 465 aa22.09■■□□□ 1.13
TRAPPC6B-205ENST00000555269 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
TRAPPC6B-205ENST00000555269 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
TRAPPC6B-205ENST00000555269 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
TRAPPC6B-205ENST00000555269 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
TRAPPC6B-205ENST00000555269 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
TRAPPC6B-205ENST00000555269 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC6B-205ENST00000555269 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
TRAPPC6B-205ENST00000555269 CUX1P39880 1505 aa21.83■■□□□ 1.09
TRAPPC6B-205ENST00000555269 SOGA1O94964 1423 aa21.82■■□□□ 1.08
TRAPPC6B-205ENST00000555269 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
TRAPPC6B-205ENST00000555269 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
TRAPPC6B-205ENST00000555269 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
TRAPPC6B-205ENST00000555269 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
TRAPPC6B-205ENST00000555269 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
TRAPPC6B-205ENST00000555269 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
TRAPPC6B-205ENST00000555269 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
TRAPPC6B-205ENST00000555269 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
TRAPPC6B-205ENST00000555269 FBLN2P98095 1184 aa21.63■■□□□ 1.05
TRAPPC6B-205ENST00000555269 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
TRAPPC6B-205ENST00000555269 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
TRAPPC6B-205ENST00000555269 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
TRAPPC6B-205ENST00000555269 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.03
TRAPPC6B-205ENST00000555269 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC6B-205ENST00000555269 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
TRAPPC6B-205ENST00000555269 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
TRAPPC6B-205ENST00000555269 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
TRAPPC6B-205ENST00000555269 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
TRAPPC6B-205ENST00000555269 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
TRAPPC6B-205ENST00000555269 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC6B-205ENST00000555269 CHD1O14646 1710 aa21.39■■□□□ 1.01
TRAPPC6B-205ENST00000555269 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
TRAPPC6B-205ENST00000555269 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
TRAPPC6B-205ENST00000555269 PBRM1Q86U86 1689 aa21.32■■□□□ 1
TRAPPC6B-205ENST00000555269 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
TRAPPC6B-205ENST00000555269 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
TRAPPC6B-205ENST00000555269 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
TRAPPC6B-205ENST00000555269 IGF1RP08069 1367 aa21.24■□□□□ 0.99
TRAPPC6B-205ENST00000555269 RIMBP3CA6NJZ7 1639 aa21.24■□□□□ 0.99
TRAPPC6B-205ENST00000555269 RIMBP3BA6NNM3 1639 aa21.24■□□□□ 0.99
TRAPPC6B-205ENST00000555269 RIMBP3Q9UFD9 1639 aa21.24■□□□□ 0.99
TRAPPC6B-205ENST00000555269 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
TRAPPC6B-205ENST00000555269 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
TRAPPC6B-205ENST00000555269 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
TRAPPC6B-205ENST00000555269 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
TRAPPC6B-205ENST00000555269 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
TRAPPC6B-205ENST00000555269 NUP160Q12769 1436 aa21.12■□□□□ 0.97
TRAPPC6B-205ENST00000555269 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms