RNA–Protein interactions for RNA: ENST00000555264.6

TMEM199-205, Transcript of transmembrane protein 199, humanhuman

TSL 5

Gene TMEM199, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-205ENST00000555264 NISCHQ9Y2I1 1504 aa48.29■■■■■ 5.32
TMEM199-205ENST00000555264 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
TMEM199-205ENST00000555264 ABCC9O60706 1549 aa42.33■■■■■ 4.37
TMEM199-205ENST00000555264 RB1CC1Q8TDY2 1594 aa40.58■■■■■ 4.09
TMEM199-205ENST00000555264 DCAF8L2P0C7V8 631 aa40.5■■■■■ 4.07
TMEM199-205ENST00000555264 NACADO15069 1562 aa40.48■■■■■ 4.07
TMEM199-205ENST00000555264 ZCCHC6Q5VYS8 1495 aaKnown RBP40.18■■■■■ 4.02
TMEM199-205ENST00000555264 MYO15BQ96JP2 1530 aa40.17■■■■■ 4.02
TMEM199-205ENST00000555264 DCAF1Q9Y4B6 1507 aa39.92■■■■□ 3.98
TMEM199-205ENST00000555264 UNC13AQ9UPW8 1703 aa39.62■■■■□ 3.93
TMEM199-205ENST00000555264 PABPN1Q86U42 306 aaKnown RBP eCLIP39.56■■■■□ 3.92
TMEM199-205ENST00000555264 BICRAQ9NZM4 1560 aa39.37■■■■□ 3.89
TMEM199-205ENST00000555264 SCRIBQ14160 1630 aa39.25■■■■□ 3.87
TMEM199-205ENST00000555264 DNAJC5BQ9UF47 199 aa39.06■■■■□ 3.84
TMEM199-205ENST00000555264 SHROOM4Q9ULL8 1493 aa38.92■■■■□ 3.82
TMEM199-205ENST00000555264 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
TMEM199-205ENST00000555264 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
TMEM199-205ENST00000555264 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
TMEM199-205ENST00000555264 SMARCA4P51532 1647 aa37.5■■■■□ 3.59
TMEM199-205ENST00000555264 BAZ1AQ9NRL2 1556 aaPredicted RBP37.43■■■■□ 3.58
TMEM199-205ENST00000555264 NCAPD3P42695 1498 aa37.38■■■■□ 3.57
TMEM199-205ENST00000555264 ATAD2BQ9ULI0 1458 aa37.38■■■■□ 3.57
TMEM199-205ENST00000555264 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
TMEM199-205ENST00000555264 MROH2BQ7Z745 1585 aa37.22■■■■□ 3.55
TMEM199-205ENST00000555264 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
TMEM199-205ENST00000555264 PEG3Q9GZU2 1588 aa37.13■■■■□ 3.53
TMEM199-205ENST00000555264 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.52
TMEM199-205ENST00000555264 WIZO95785 1651 aa36.8■■■■□ 3.48
TMEM199-205ENST00000555264 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
TMEM199-205ENST00000555264 NESP48681 1621 aa36.56■■■■□ 3.44
TMEM199-205ENST00000555264 ERCC6Q03468 1493 aa36.5■■■■□ 3.43
TMEM199-205ENST00000555264 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
TMEM199-205ENST00000555264 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
TMEM199-205ENST00000555264 CADPSQ9ULU8 1353 aa36.3■■■■□ 3.4
TMEM199-205ENST00000555264 PDS5BQ9NTI5 1447 aa36.21■■■■□ 3.39
TMEM199-205ENST00000555264 CUX2O14529 1486 aa36.17■■■■□ 3.38
TMEM199-205ENST00000555264 KIF21AQ7Z4S6 1674 aa36.08■■■■□ 3.37
TMEM199-205ENST00000555264 CFTRP13569 1480 aa36.03■■■■□ 3.36
TMEM199-205ENST00000555264 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
TMEM199-205ENST00000555264 CCDC88BA6NC98 1476 aa35.99■■■■□ 3.35
TMEM199-205ENST00000555264 FANCD2Q9BXW9 1451 aa35.87■■■■□ 3.33
TMEM199-205ENST00000555264 MRC2Q9UBG0 1479 aa35.84■■■■□ 3.33
TMEM199-205ENST00000555264 CEP164Q9UPV0 1460 aa35.84■■■■□ 3.33
TMEM199-205ENST00000555264 WDR62O43379 1518 aa35.72■■■■□ 3.31
TMEM199-205ENST00000555264 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
TMEM199-205ENST00000555264 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
TMEM199-205ENST00000555264 URB2Q14146 1524 aaKnown RBP35.52■■■■□ 3.28
TMEM199-205ENST00000555264 DNAJC5Q9H3Z4 198 aa35.33■■■■□ 3.25
TMEM199-205ENST00000555264 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
TMEM199-205ENST00000555264 ABCC8Q09428 1581 aa35.24■■■■□ 3.23
TMEM199-205ENST00000555264 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
TMEM199-205ENST00000555264 IFT140Q96RY7 1462 aa35.1■■■■□ 3.21
TMEM199-205ENST00000555264 ZNF608Q9ULD9 1512 aaPredicted RBP34.98■■■■□ 3.19
TMEM199-205ENST00000555264 POLA1P09884 1462 aaPredicted RBP34.97■■■■□ 3.19
TMEM199-205ENST00000555264 CUX1P39880 1505 aa34.93■■■■□ 3.18
TMEM199-205ENST00000555264 TARBP1Q13395 1621 aaKnown RBP34.88■■■■□ 3.17
TMEM199-205ENST00000555264 FGD5Q6ZNL6 1462 aa34.85■■■■□ 3.17
TMEM199-205ENST00000555264 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
TMEM199-205ENST00000555264 SOGA1O94964 1423 aa34.83■■■■□ 3.17
TMEM199-205ENST00000555264 EIF4G3O43432 1585 aaKnown RBP34.8■■■■□ 3.16
TMEM199-205ENST00000555264 AQRO60306 1485 aaKnown RBP eCLIP34.77■■■■□ 3.162e-6■■■■□ 25.7
TMEM199-205ENST00000555264 TDRD9Q8NDG6 1382 aaKnown RBP34.67■■■■□ 3.14
TMEM199-205ENST00000555264 OSCARQ8IYS5 282 aa34.67■■■■□ 3.14
TMEM199-205ENST00000555264 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
TMEM199-205ENST00000555264 WDR97A6NE52 1622 aa34.58■■■■□ 3.13
TMEM199-205ENST00000555264 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
TMEM199-205ENST00000555264 SYNJ1O43426 1573 aa34.55■■■■□ 3.12
TMEM199-205ENST00000555264 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
TMEM199-205ENST00000555264 ABCA10Q8WWZ4 1543 aa34.5■■■■□ 3.11
TMEM199-205ENST00000555264 GRIN2BQ13224 1484 aa34.44■■■■□ 3.1
TMEM199-205ENST00000555264 SNAPC4Q5SXM2 1469 aa34.43■■■■□ 3.1
TMEM199-205ENST00000555264 FBLN2P98095 1184 aa34.42■■■■□ 3.1
TMEM199-205ENST00000555264 GAPVD1Q14C86 1478 aa34.41■■■■□ 3.1
TMEM199-205ENST00000555264 CHD1O14646 1710 aa34.38■■■■□ 3.09
TMEM199-205ENST00000555264 MAGI1Q96QZ7 1491 aaPredicted RBP34.36■■■■□ 3.09
TMEM199-205ENST00000555264 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
TMEM199-205ENST00000555264 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
TMEM199-205ENST00000555264 CHMP7Q8WUX9 453 aaPredicted RBP34.28■■■■□ 3.08
TMEM199-205ENST00000555264 SYNJ2O15056 1496 aa34.24■■■■□ 3.07
TMEM199-205ENST00000555264 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
TMEM199-205ENST00000555264 RIMBP3CA6NJZ7 1639 aa34.09■■■■□ 3.05
TMEM199-205ENST00000555264 RIMBP3BA6NNM3 1639 aa34.09■■■■□ 3.05
TMEM199-205ENST00000555264 RIMBP3Q9UFD9 1639 aa34.09■■■■□ 3.05
TMEM199-205ENST00000555264 ARHGEF11O15085 1522 aa34.08■■■■□ 3.05
TMEM199-205ENST00000555264 ERICH3Q5RHP9 1530 aa34.07■■■■□ 3.04
TMEM199-205ENST00000555264 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
TMEM199-205ENST00000555264 CLASP1Q7Z460 1538 aa34.03■■■■□ 3.04
TMEM199-205ENST00000555264 FHAD1B1AJZ9 1412 aa34.01■■■■□ 3.03
TMEM199-205ENST00000555264 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
TMEM199-205ENST00000555264 KIF27Q86VH2 1401 aa33.94■■■■□ 3.02
TMEM199-205ENST00000555264 NUP160Q12769 1436 aa33.85■■■■□ 3.01
TMEM199-205ENST00000555264 IGF1RP08069 1367 aa33.84■■■■□ 3.01
TMEM199-205ENST00000555264 CEP170Q5SW79 1584 aa33.82■■■■□ 3
TMEM199-205ENST00000555264 CYB5RLQ6IPT4 315 aa33.82■■■■□ 3
TMEM199-205ENST00000555264 ARAP1Q96P48 1450 aa33.8■■■■□ 3
TMEM199-205ENST00000555264 CUL7Q14999 1698 aa33.71■■■□□ 2.99
TMEM199-205ENST00000555264 CARMIL1Q5VZK9 1371 aa33.63■■■□□ 2.97
TMEM199-205ENST00000555264 SHROOM2Q13796 1616 aa33.58■■■□□ 2.97
TMEM199-205ENST00000555264 RUSC2Q8N2Y8 1516 aa33.58■■■□□ 2.97
TMEM199-205ENST00000555264 ERCC6L2Q5T890 1561 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms