RNA–Protein interactions for RNA: ENST00000555193.1

TGFB3-203, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-203ENST00000555193 NISCHQ9Y2I1 1504 aa37.84■■■■□ 3.65
TGFB3-203ENST00000555193 ABCC9O60706 1549 aa35.65■■■■□ 3.3
TGFB3-203ENST00000555193 CCDC180Q9P1Z9 1646 aa34.49■■■■□ 3.11
TGFB3-203ENST00000555193 DNAJC5BQ9UF47 199 aa34.42■■■■□ 3.1
TGFB3-203ENST00000555193 RB1CC1Q8TDY2 1594 aa33.36■■■□□ 2.93
TGFB3-203ENST00000555193 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
TGFB3-203ENST00000555193 NACADO15069 1562 aa32.81■■■□□ 2.84
TGFB3-203ENST00000555193 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
TGFB3-203ENST00000555193 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
TGFB3-203ENST00000555193 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
TGFB3-203ENST00000555193 DNAJC5Q9H3Z4 198 aa32.36■■■□□ 2.77
TGFB3-203ENST00000555193 CECR2Q9BXF3 1484 aa32.18■■■□□ 2.74
TGFB3-203ENST00000555193 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
TGFB3-203ENST00000555193 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
TGFB3-203ENST00000555193 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
TGFB3-203ENST00000555193 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.67
TGFB3-203ENST00000555193 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
TGFB3-203ENST00000555193 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
TGFB3-203ENST00000555193 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
TGFB3-203ENST00000555193 CUX2O14529 1486 aa31.08■■■□□ 2.57
TGFB3-203ENST00000555193 ERCC6Q03468 1493 aa30.83■■■□□ 2.53
TGFB3-203ENST00000555193 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
TGFB3-203ENST00000555193 NESP48681 1621 aa30.33■■■□□ 2.45
TGFB3-203ENST00000555193 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
TGFB3-203ENST00000555193 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
TGFB3-203ENST00000555193 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
TGFB3-203ENST00000555193 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
TGFB3-203ENST00000555193 HMGXB3Q12766 1538 aa29.99■■■□□ 2.39
TGFB3-203ENST00000555193 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
TGFB3-203ENST00000555193 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
TGFB3-203ENST00000555193 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
TGFB3-203ENST00000555193 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
TGFB3-203ENST00000555193 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
TGFB3-203ENST00000555193 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
TGFB3-203ENST00000555193 MRC2Q9UBG0 1479 aa29.52■■■□□ 2.32
TGFB3-203ENST00000555193 WDR62O43379 1518 aa29.5■■■□□ 2.31
TGFB3-203ENST00000555193 OSCARQ8IYS5 282 aa29.46■■■□□ 2.31
TGFB3-203ENST00000555193 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
TGFB3-203ENST00000555193 RIMBP3CA6NJZ7 1639 aa29.35■■■□□ 2.29
TGFB3-203ENST00000555193 RIMBP3BA6NNM3 1639 aa29.35■■■□□ 2.29
TGFB3-203ENST00000555193 RIMBP3Q9UFD9 1639 aa29.35■■■□□ 2.29
TGFB3-203ENST00000555193 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
TGFB3-203ENST00000555193 MROH2BQ7Z745 1585 aa29.2■■■□□ 2.26
TGFB3-203ENST00000555193 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
TGFB3-203ENST00000555193 ARHGEF11O15085 1522 aa29.09■■■□□ 2.25
TGFB3-203ENST00000555193 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
TGFB3-203ENST00000555193 TRHP20396 242 aaPredicted RBP28.99■■■□□ 2.23
TGFB3-203ENST00000555193 AEBP2Q6ZN18 517 aaPredicted RBP28.97■■■□□ 2.23
TGFB3-203ENST00000555193 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
TGFB3-203ENST00000555193 URB2Q14146 1524 aaKnown RBP28.91■■■□□ 2.22
TGFB3-203ENST00000555193 WIZO95785 1651 aa28.86■■■□□ 2.21
TGFB3-203ENST00000555193 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
TGFB3-203ENST00000555193 CFTRP13569 1480 aa28.75■■■□□ 2.19
TGFB3-203ENST00000555193 ARAP1Q96P48 1450 aa28.72■■■□□ 2.19
TGFB3-203ENST00000555193 CHD1O14646 1710 aa28.65■■■□□ 2.18
TGFB3-203ENST00000555193 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
TGFB3-203ENST00000555193 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
TGFB3-203ENST00000555193 PRDM2Q13029 1718 aa28.54■■■□□ 2.16
TGFB3-203ENST00000555193 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
TGFB3-203ENST00000555193 FBLN2P98095 1184 aa28.39■■■□□ 2.14
TGFB3-203ENST00000555193 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
TGFB3-203ENST00000555193 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
TGFB3-203ENST00000555193 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
TGFB3-203ENST00000555193 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
TGFB3-203ENST00000555193 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
TGFB3-203ENST00000555193 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
TGFB3-203ENST00000555193 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
TGFB3-203ENST00000555193 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
TGFB3-203ENST00000555193 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
TGFB3-203ENST00000555193 CCDC88BA6NC98 1476 aa28.01■■■□□ 2.07
TGFB3-203ENST00000555193 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
TGFB3-203ENST00000555193 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
TGFB3-203ENST00000555193 TDRD9Q8NDG6 1382 aaKnown RBP27.97■■■□□ 2.07
TGFB3-203ENST00000555193 GAPVD1Q14C86 1478 aa27.94■■■□□ 2.06
TGFB3-203ENST00000555193 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
TGFB3-203ENST00000555193 ILDR1Q86SU0 546 aaPredicted RBP27.9■■■□□ 2.06
TGFB3-203ENST00000555193 SOGA1O94964 1423 aa27.83■■■□□ 2.05
TGFB3-203ENST00000555193 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.04
TGFB3-203ENST00000555193 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
TGFB3-203ENST00000555193 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
TGFB3-203ENST00000555193 KIF13AQ9H1H9 1805 aa27.76■■■□□ 2.04
TGFB3-203ENST00000555193 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
TGFB3-203ENST00000555193 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
TGFB3-203ENST00000555193 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
TGFB3-203ENST00000555193 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
TGFB3-203ENST00000555193 KDM4FA0A1W2PPD8 638 aa27.54■■■□□ 2
TGFB3-203ENST00000555193 CEP170Q5SW79 1584 aa27.52■■■□□ 2
TGFB3-203ENST00000555193 CUX1P39880 1505 aa27.5■■□□□ 1.99
TGFB3-203ENST00000555193 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
TGFB3-203ENST00000555193 ABCA5Q8WWZ7 1642 aa27.39■■□□□ 1.98
TGFB3-203ENST00000555193 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
TGFB3-203ENST00000555193 KDM6BO15054 1643 aa27.36■■□□□ 1.97
TGFB3-203ENST00000555193 FAM69CQ0P6D2 419 aa27.35■■□□□ 1.97
TGFB3-203ENST00000555193 ABCC10Q5T3U5 1492 aa27.31■■□□□ 1.96
TGFB3-203ENST00000555193 NUP160Q12769 1436 aa27.3■■□□□ 1.96
TGFB3-203ENST00000555193 TSPOAP1O95153 1857 aa27.3■■□□□ 1.96
TGFB3-203ENST00000555193 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
TGFB3-203ENST00000555193 DIP2BQ9P265 1576 aa27.27■■□□□ 1.96
TGFB3-203ENST00000555193 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.95
TGFB3-203ENST00000555193 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms