RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.88
TRIM9-204ENST00000555170 ABCC9O60706 1549 aa19■□□□□ 0.63
TRIM9-204ENST00000555170 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
TRIM9-204ENST00000555170 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
TRIM9-204ENST00000555170 RB1CC1Q8TDY2 1594 aa17.71■□□□□ 0.43
TRIM9-204ENST00000555170 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRIM9-204ENST00000555170 NACADO15069 1562 aa17.44■□□□□ 0.38
TRIM9-204ENST00000555170 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
TRIM9-204ENST00000555170 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
TRIM9-204ENST00000555170 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
TRIM9-204ENST00000555170 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
TRIM9-204ENST00000555170 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
TRIM9-204ENST00000555170 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
TRIM9-204ENST00000555170 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
TRIM9-204ENST00000555170 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
TRIM9-204ENST00000555170 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
TRIM9-204ENST00000555170 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
TRIM9-204ENST00000555170 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
TRIM9-204ENST00000555170 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
TRIM9-204ENST00000555170 CUX2O14529 1486 aa16.54■□□□□ 0.24
TRIM9-204ENST00000555170 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
TRIM9-204ENST00000555170 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
TRIM9-204ENST00000555170 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
TRIM9-204ENST00000555170 NESP48681 1621 aa16.15■□□□□ 0.18
TRIM9-204ENST00000555170 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
TRIM9-204ENST00000555170 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
TRIM9-204ENST00000555170 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
TRIM9-204ENST00000555170 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
TRIM9-204ENST00000555170 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
TRIM9-204ENST00000555170 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
TRIM9-204ENST00000555170 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
TRIM9-204ENST00000555170 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
TRIM9-204ENST00000555170 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.13
TRIM9-204ENST00000555170 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.12
TRIM9-204ENST00000555170 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
TRIM9-204ENST00000555170 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
TRIM9-204ENST00000555170 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
TRIM9-204ENST00000555170 WIZO95785 1651 aa15.75■□□□□ 0.11
TRIM9-204ENST00000555170 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
TRIM9-204ENST00000555170 CADPSQ9ULU8 1353 aa15.66■□□□□ 0.1
TRIM9-204ENST00000555170 WDR62O43379 1518 aa15.66■□□□□ 0.1
TRIM9-204ENST00000555170 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
TRIM9-204ENST00000555170 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
TRIM9-204ENST00000555170 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
TRIM9-204ENST00000555170 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
TRIM9-204ENST00000555170 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
TRIM9-204ENST00000555170 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
TRIM9-204ENST00000555170 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
TRIM9-204ENST00000555170 CYB5RLQ6IPT4 315 aa15.51■□□□□ 0.07
TRIM9-204ENST00000555170 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
TRIM9-204ENST00000555170 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
TRIM9-204ENST00000555170 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
TRIM9-204ENST00000555170 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
TRIM9-204ENST00000555170 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
TRIM9-204ENST00000555170 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.04
TRIM9-204ENST00000555170 CFTRP13569 1480 aa15.32■□□□□ 0.04
TRIM9-204ENST00000555170 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
TRIM9-204ENST00000555170 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
TRIM9-204ENST00000555170 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
TRIM9-204ENST00000555170 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
TRIM9-204ENST00000555170 FBLN2P98095 1184 aa15.19■□□□□ 0.02
TRIM9-204ENST00000555170 CHD1O14646 1710 aa15.12■□□□□ 0.01
TRIM9-204ENST00000555170 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
TRIM9-204ENST00000555170 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRIM9-204ENST00000555170 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
TRIM9-204ENST00000555170 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
TRIM9-204ENST00000555170 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
TRIM9-204ENST00000555170 ILDR1Q86SU0 546 aaPredicted RBP14.98□□□□□ -0.01
TRIM9-204ENST00000555170 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
TRIM9-204ENST00000555170 CLASP1Q7Z460 1538 aa14.95□□□□□ -0.02
TRIM9-204ENST00000555170 TDRD9Q8NDG6 1382 aaKnown RBP14.95□□□□□ -0.02
TRIM9-204ENST00000555170 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
TRIM9-204ENST00000555170 POLA1P09884 1462 aaPredicted RBP14.9□□□□□ -0.02
TRIM9-204ENST00000555170 RAD54L2Q9Y4B4 1467 aa14.9□□□□□ -0.02
TRIM9-204ENST00000555170 CUX1P39880 1505 aa14.9□□□□□ -0.02
TRIM9-204ENST00000555170 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
TRIM9-204ENST00000555170 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
TRIM9-204ENST00000555170 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
TRIM9-204ENST00000555170 SOGA1O94964 1423 aa14.86□□□□□ -0.03
TRIM9-204ENST00000555170 FGD5Q6ZNL6 1462 aa14.83□□□□□ -0.03
TRIM9-204ENST00000555170 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
TRIM9-204ENST00000555170 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
TRIM9-204ENST00000555170 MAGI1Q96QZ7 1491 aaPredicted RBP14.79□□□□□ -0.04
TRIM9-204ENST00000555170 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
TRIM9-204ENST00000555170 SYNJ2O15056 1496 aa14.77□□□□□ -0.04
TRIM9-204ENST00000555170 KDM4FA0A1W2PPD8 638 aa14.77□□□□□ -0.05
TRIM9-204ENST00000555170 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
TRIM9-204ENST00000555170 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
TRIM9-204ENST00000555170 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
TRIM9-204ENST00000555170 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
TRIM9-204ENST00000555170 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
TRIM9-204ENST00000555170 KIF13AQ9H1H9 1805 aa14.67□□□□□ -0.06
TRIM9-204ENST00000555170 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
TRIM9-204ENST00000555170 FAM69CQ0P6D2 419 aa14.64□□□□□ -0.07
TRIM9-204ENST00000555170 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
TRIM9-204ENST00000555170 GRIN2AQ12879 1464 aa14.56□□□□□ -0.08
TRIM9-204ENST00000555170 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
TRIM9-204ENST00000555170 NUP160Q12769 1436 aa14.54□□□□□ -0.08
TRIM9-204ENST00000555170 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
TRIM9-204ENST00000555170 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms