RNA–Protein interactions for RNA: ENST00000555144.5

MLH3-206, Transcript of mutL homolog 3, humanhuman

TSL 2

Gene MLH3, Length 1,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-206ENST00000555144 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
MLH3-206ENST00000555144 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
MLH3-206ENST00000555144 ABCC9O60706 1549 aa27.51■■■□□ 2
MLH3-206ENST00000555144 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
MLH3-206ENST00000555144 NACADO15069 1562 aa26.08■■□□□ 1.77
MLH3-206ENST00000555144 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
MLH3-206ENST00000555144 DCAF8L2P0C7V8 631 aa25.84■■□□□ 1.73
MLH3-206ENST00000555144 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
MLH3-206ENST00000555144 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
MLH3-206ENST00000555144 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
MLH3-206ENST00000555144 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
MLH3-206ENST00000555144 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
MLH3-206ENST00000555144 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
MLH3-206ENST00000555144 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
MLH3-206ENST00000555144 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
MLH3-206ENST00000555144 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
MLH3-206ENST00000555144 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
MLH3-206ENST00000555144 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.56
MLH3-206ENST00000555144 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
MLH3-206ENST00000555144 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
MLH3-206ENST00000555144 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
MLH3-206ENST00000555144 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
MLH3-206ENST00000555144 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
MLH3-206ENST00000555144 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
MLH3-206ENST00000555144 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
MLH3-206ENST00000555144 CUX2O14529 1486 aa23.78■■□□□ 1.4
MLH3-206ENST00000555144 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
MLH3-206ENST00000555144 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
MLH3-206ENST00000555144 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
MLH3-206ENST00000555144 NESP48681 1621 aa23.66■■□□□ 1.38
MLH3-206ENST00000555144 MROH2BQ7Z745 1585 aa23.66■■□□□ 1.38
MLH3-206ENST00000555144 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
MLH3-206ENST00000555144 THOC2Q8NI27 1593 aaKnown RBP23.43■■□□□ 1.34
MLH3-206ENST00000555144 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
MLH3-206ENST00000555144 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
MLH3-206ENST00000555144 WIZO95785 1651 aa23.35■■□□□ 1.33
MLH3-206ENST00000555144 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.33
MLH3-206ENST00000555144 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
MLH3-206ENST00000555144 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
MLH3-206ENST00000555144 WDR62O43379 1518 aa23.13■■□□□ 1.29
MLH3-206ENST00000555144 CFTRP13569 1480 aa23.1■■□□□ 1.29
MLH3-206ENST00000555144 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
MLH3-206ENST00000555144 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
MLH3-206ENST00000555144 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
MLH3-206ENST00000555144 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
MLH3-206ENST00000555144 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
MLH3-206ENST00000555144 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
MLH3-206ENST00000555144 OSCARQ8IYS5 282 aa22.7■■□□□ 1.22
MLH3-206ENST00000555144 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
MLH3-206ENST00000555144 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
MLH3-206ENST00000555144 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
MLH3-206ENST00000555144 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
MLH3-206ENST00000555144 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.21
MLH3-206ENST00000555144 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
MLH3-206ENST00000555144 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
MLH3-206ENST00000555144 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
MLH3-206ENST00000555144 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
MLH3-206ENST00000555144 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.17
MLH3-206ENST00000555144 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
MLH3-206ENST00000555144 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
MLH3-206ENST00000555144 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
MLH3-206ENST00000555144 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
MLH3-206ENST00000555144 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
MLH3-206ENST00000555144 SOGA1O94964 1423 aa22.29■■□□□ 1.16
MLH3-206ENST00000555144 CHD1O14646 1710 aa22.25■■□□□ 1.15
MLH3-206ENST00000555144 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
MLH3-206ENST00000555144 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
MLH3-206ENST00000555144 CUX1P39880 1505 aa22.22■■□□□ 1.15
MLH3-206ENST00000555144 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
MLH3-206ENST00000555144 FBLN2P98095 1184 aa22.17■■□□□ 1.14
MLH3-206ENST00000555144 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
MLH3-206ENST00000555144 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
MLH3-206ENST00000555144 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
MLH3-206ENST00000555144 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
MLH3-206ENST00000555144 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
MLH3-206ENST00000555144 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
MLH3-206ENST00000555144 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
MLH3-206ENST00000555144 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
MLH3-206ENST00000555144 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
MLH3-206ENST00000555144 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
MLH3-206ENST00000555144 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
MLH3-206ENST00000555144 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
MLH3-206ENST00000555144 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
MLH3-206ENST00000555144 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
MLH3-206ENST00000555144 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
MLH3-206ENST00000555144 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
MLH3-206ENST00000555144 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
MLH3-206ENST00000555144 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
MLH3-206ENST00000555144 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
MLH3-206ENST00000555144 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
MLH3-206ENST00000555144 NUP160Q12769 1436 aa21.77■■□□□ 1.08
MLH3-206ENST00000555144 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
MLH3-206ENST00000555144 ERICH3Q5RHP9 1530 aa21.73■■□□□ 1.07
MLH3-206ENST00000555144 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
MLH3-206ENST00000555144 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
MLH3-206ENST00000555144 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
MLH3-206ENST00000555144 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
MLH3-206ENST00000555144 PRG4Q92954 1404 aaPredicted RBP21.52■■□□□ 1.04
MLH3-206ENST00000555144 IGF1RP08069 1367 aa21.48■■□□□ 1.03
MLH3-206ENST00000555144 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms