RNA–Protein interactions for RNA: ENST00000555113.5

UBR7-205, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-205ENST00000555113 NISCHQ9Y2I1 1504 aa52.54■■■■■ 6
UBR7-205ENST00000555113 ABCC9O60706 1549 aa47.55■■■■■ 5.2
UBR7-205ENST00000555113 CCDC180Q9P1Z9 1646 aa47.43■■■■■ 5.18
UBR7-205ENST00000555113 RB1CC1Q8TDY2 1594 aa45.23■■■■■ 4.83
UBR7-205ENST00000555113 NACADO15069 1562 aa44.83■■■■■ 4.77
UBR7-205ENST00000555113 DNAJC5BQ9UF47 199 aa44.73■■■■■ 4.75
UBR7-205ENST00000555113 DCAF8L2P0C7V8 631 aa44.35■■■■■ 4.69
UBR7-205ENST00000555113 UNC13AQ9UPW8 1703 aa44.29■■■■■ 4.68
UBR7-205ENST00000555113 PABPN1Q86U42 306 aaKnown RBP eCLIP44.12■■■■■ 4.65
UBR7-205ENST00000555113 MYO15BQ96JP2 1530 aa44.1■■■■■ 4.65
UBR7-205ENST00000555113 BICRAQ9NZM4 1560 aa43.87■■■■■ 4.61
UBR7-205ENST00000555113 ZCCHC6Q5VYS8 1495 aaKnown RBP43.5■■■■■ 4.55
UBR7-205ENST00000555113 DCAF1Q9Y4B6 1507 aa43.43■■■■■ 4.54
UBR7-205ENST00000555113 SHROOM4Q9ULL8 1493 aa43.33■■■■■ 4.53
UBR7-205ENST00000555113 SCRIBQ14160 1630 aa43.11■■■■■ 4.49
UBR7-205ENST00000555113 CC2D2AQ9P2K1 1620 aa43■■■■■ 4.47
UBR7-205ENST00000555113 CECR2Q9BXF3 1484 aa42.88■■■■■ 4.46
UBR7-205ENST00000555113 EIF4G1Q04637 1599 aaKnown RBP42.85■■■■■ 4.45
UBR7-205ENST00000555113 DNAJC5Q9H3Z4 198 aa41.37■■■■■ 4.21
UBR7-205ENST00000555113 NCAPD3P42695 1498 aa41.31■■■■■ 4.2
UBR7-205ENST00000555113 CUX2O14529 1486 aa41.18■■■■■ 4.18
UBR7-205ENST00000555113 ATAD2BQ9ULI0 1458 aa41.15■■■■■ 4.18
UBR7-205ENST00000555113 ERCC6Q03468 1493 aa41.14■■■■■ 4.18
UBR7-205ENST00000555113 SMARCA4P51532 1647 aa41.11■■■■■ 4.17
UBR7-205ENST00000555113 SMARCA2P51531 1590 aa41.1■■■■■ 4.17
UBR7-205ENST00000555113 HMGXB3Q12766 1538 aa41.08■■■■■ 4.17
UBR7-205ENST00000555113 BAZ1AQ9NRL2 1556 aaPredicted RBP40.86■■■■■ 4.13
UBR7-205ENST00000555113 BAZ1BQ9UIG0 1483 aaKnown RBP40.78■■■■■ 4.12
UBR7-205ENST00000555113 NESP48681 1621 aa40.75■■■■■ 4.11
UBR7-205ENST00000555113 PEG3Q9GZU2 1588 aa40.71■■■■■ 4.11
UBR7-205ENST00000555113 LAMC3Q9Y6N6 1575 aa40.53■■■■■ 4.08
UBR7-205ENST00000555113 THOC2Q8NI27 1593 aaKnown RBP40.51■■■■■ 4.08
UBR7-205ENST00000555113 MROH2BQ7Z745 1585 aa40.45■■■■■ 4.07
UBR7-205ENST00000555113 KIF21AQ7Z4S6 1674 aa40.36■■■■■ 4.05
UBR7-205ENST00000555113 PDS5BQ9NTI5 1447 aa40.24■■■■■ 4.03
UBR7-205ENST00000555113 CADPSQ9ULU8 1353 aa40.02■■■■■ 4
UBR7-205ENST00000555113 WIZO95785 1651 aa40.01■■■■■ 4
UBR7-205ENST00000555113 MRC2Q9UBG0 1479 aa39.93■■■■□ 3.98
UBR7-205ENST00000555113 WDR62O43379 1518 aa39.86■■■■□ 3.97
UBR7-205ENST00000555113 CEP164Q9UPV0 1460 aa39.72■■■■□ 3.95
UBR7-205ENST00000555113 FANCD2Q9BXW9 1451 aa39.62■■■■□ 3.93
UBR7-205ENST00000555113 CFTRP13569 1480 aa39.54■■■■□ 3.92
UBR7-205ENST00000555113 TOP2AP11388 1531 aaKnown RBP39.5■■■■□ 3.91
UBR7-205ENST00000555113 RSF1Q96T23 1441 aaPredicted RBP39.48■■■■□ 3.91
UBR7-205ENST00000555113 TRIM41Q8WV44 630 aa39.44■■■■□ 3.9
UBR7-205ENST00000555113 PRDM2Q13029 1718 aa39.34■■■■□ 3.89
UBR7-205ENST00000555113 URB2Q14146 1524 aaKnown RBP39.3■■■■□ 3.88
UBR7-205ENST00000555113 OSCARQ8IYS5 282 aa39.14■■■■□ 3.86
UBR7-205ENST00000555113 CCDC88BA6NC98 1476 aa38.97■■■■□ 3.83
UBR7-205ENST00000555113 IFT140Q96RY7 1462 aa38.92■■■■□ 3.82
UBR7-205ENST00000555113 TOPBP1Q92547 1522 aa38.84■■■■□ 3.81
UBR7-205ENST00000555113 ZNF608Q9ULD9 1512 aaPredicted RBP38.84■■■■□ 3.81
UBR7-205ENST00000555113 RIMBP3CA6NJZ7 1639 aa38.78■■■■□ 3.8
UBR7-205ENST00000555113 RIMBP3BA6NNM3 1639 aa38.78■■■■□ 3.8
UBR7-205ENST00000555113 RIMBP3Q9UFD9 1639 aa38.78■■■■□ 3.8
UBR7-205ENST00000555113 ABCC8Q09428 1581 aa38.77■■■■□ 3.8
UBR7-205ENST00000555113 EIF4G3O43432 1585 aaKnown RBP38.72■■■■□ 3.79
UBR7-205ENST00000555113 DNMBPQ6XZF7 1577 aa38.72■■■■□ 3.79
UBR7-205ENST00000555113 ARHGEF11O15085 1522 aa38.6■■■■□ 3.77
UBR7-205ENST00000555113 TARBP1Q13395 1621 aaKnown RBP38.55■■■■□ 3.76
UBR7-205ENST00000555113 CHD1O14646 1710 aa38.54■■■■□ 3.76
UBR7-205ENST00000555113 AQRO60306 1485 aaKnown RBP eCLIP38.42■■■■□ 3.74
UBR7-205ENST00000555113 POLA1P09884 1462 aaPredicted RBP38.41■■■■□ 3.74
UBR7-205ENST00000555113 RAD54L2Q9Y4B4 1467 aa38.23■■■■□ 3.71
UBR7-205ENST00000555113 FBLN2P98095 1184 aa38.22■■■■□ 3.71
UBR7-205ENST00000555113 CYB5RLQ6IPT4 315 aa38.22■■■■□ 3.71
UBR7-205ENST00000555113 WDR97A6NE52 1622 aa38.22■■■■□ 3.71
UBR7-205ENST00000555113 SOGA1O94964 1423 aa38.19■■■■□ 3.7
UBR7-205ENST00000555113 ARAP1Q96P48 1450 aa38.18■■■■□ 3.7
UBR7-205ENST00000555113 FGD5Q6ZNL6 1462 aa38.14■■■■□ 3.7
UBR7-205ENST00000555113 TDRD9Q8NDG6 1382 aaKnown RBP38.13■■■■□ 3.69
UBR7-205ENST00000555113 SNAPC4Q5SXM2 1469 aa38.09■■■■□ 3.69
UBR7-205ENST00000555113 CUX1P39880 1505 aa38.05■■■■□ 3.68
UBR7-205ENST00000555113 MAGI1Q96QZ7 1491 aaPredicted RBP38.01■■■■□ 3.67
UBR7-205ENST00000555113 CLASP1Q7Z460 1538 aa38.01■■■■□ 3.67
UBR7-205ENST00000555113 SYNJ1O43426 1573 aa38■■■■□ 3.67
UBR7-205ENST00000555113 GRIN2BQ13224 1484 aa37.95■■■■□ 3.67
UBR7-205ENST00000555113 TRHP20396 242 aaPredicted RBP37.93■■■■□ 3.66
UBR7-205ENST00000555113 PBRM1Q86U86 1689 aa37.91■■■■□ 3.66
UBR7-205ENST00000555113 CHMP7Q8WUX9 453 aaPredicted RBP37.9■■■■□ 3.66
UBR7-205ENST00000555113 SYNJ2O15056 1496 aa37.87■■■■□ 3.65
UBR7-205ENST00000555113 GAPVD1Q14C86 1478 aa37.77■■■■□ 3.64
UBR7-205ENST00000555113 ABCA5Q8WWZ7 1642 aa37.72■■■■□ 3.63
UBR7-205ENST00000555113 ABCA10Q8WWZ4 1543 aa37.69■■■■□ 3.62
UBR7-205ENST00000555113 ADAMTS12P58397 1594 aa37.46■■■■□ 3.59
UBR7-205ENST00000555113 GRIN2AQ12879 1464 aa37.46■■■■□ 3.59
UBR7-205ENST00000555113 WRNQ14191 1432 aaPredicted RBP eCLIP37.46■■■■□ 3.59
UBR7-205ENST00000555113 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
UBR7-205ENST00000555113 SUPT5HO00267 1087 aaKnown RBP37.43■■■■□ 3.58
UBR7-205ENST00000555113 TOP2BQ02880 1626 aa37.41■■■■□ 3.58
UBR7-205ENST00000555113 CEP170Q5SW79 1584 aa37.36■■■■□ 3.57
UBR7-205ENST00000555113 NUP160Q12769 1436 aa37.34■■■■□ 3.57
UBR7-205ENST00000555113 ERCC6L2Q5T890 1561 aa37.34■■■■□ 3.57
UBR7-205ENST00000555113 SHROOM2Q13796 1616 aa37.28■■■■□ 3.56
UBR7-205ENST00000555113 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
UBR7-205ENST00000555113 ERICH3Q5RHP9 1530 aa37.25■■■■□ 3.55
UBR7-205ENST00000555113 AEBP2Q6ZN18 517 aaPredicted RBP37.07■■■■□ 3.52
UBR7-205ENST00000555113 KIF13AQ9H1H9 1805 aa36.99■■■■□ 3.51
UBR7-205ENST00000555113 PRG4Q92954 1404 aaPredicted RBP36.97■■■■□ 3.51
UBR7-205ENST00000555113 RUSC2Q8N2Y8 1516 aa36.95■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms