RNA–Protein interactions for RNA: ENST00000555029.5

PPP4R3A-207, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-207ENST00000555029 NISCHQ9Y2I1 1504 aa35.44■■■■□ 3.26
PPP4R3A-207ENST00000555029 ABCC9O60706 1549 aa32.04■■■□□ 2.72
PPP4R3A-207ENST00000555029 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
PPP4R3A-207ENST00000555029 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
PPP4R3A-207ENST00000555029 NACADO15069 1562 aa30.21■■■□□ 2.43
PPP4R3A-207ENST00000555029 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
PPP4R3A-207ENST00000555029 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
PPP4R3A-207ENST00000555029 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
PPP4R3A-207ENST00000555029 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
PPP4R3A-207ENST00000555029 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
PPP4R3A-207ENST00000555029 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
PPP4R3A-207ENST00000555029 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
PPP4R3A-207ENST00000555029 DCAF1Q9Y4B6 1507 aa29.29■■■□□ 2.28
PPP4R3A-207ENST00000555029 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
PPP4R3A-207ENST00000555029 SCRIBQ14160 1630 aa29.05■■■□□ 2.24
PPP4R3A-207ENST00000555029 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
PPP4R3A-207ENST00000555029 CECR2Q9BXF3 1484 aa28.89■■■□□ 2.22
PPP4R3A-207ENST00000555029 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
PPP4R3A-207ENST00000555029 NCAPD3P42695 1498 aa27.86■■■□□ 2.05
PPP4R3A-207ENST00000555029 DNAJC5Q9H3Z4 198 aa27.85■■■□□ 2.05
PPP4R3A-207ENST00000555029 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
PPP4R3A-207ENST00000555029 SMARCA4P51532 1647 aa27.7■■■□□ 2.03
PPP4R3A-207ENST00000555029 CUX2O14529 1486 aa27.7■■■□□ 2.03
PPP4R3A-207ENST00000555029 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
PPP4R3A-207ENST00000555029 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
PPP4R3A-207ENST00000555029 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
PPP4R3A-207ENST00000555029 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
PPP4R3A-207ENST00000555029 BAZ1BQ9UIG0 1483 aaKnown RBP27.5■■□□□ 1.99
PPP4R3A-207ENST00000555029 NESP48681 1621 aa27.46■■□□□ 1.99
PPP4R3A-207ENST00000555029 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
PPP4R3A-207ENST00000555029 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
PPP4R3A-207ENST00000555029 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
PPP4R3A-207ENST00000555029 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
PPP4R3A-207ENST00000555029 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
PPP4R3A-207ENST00000555029 PDS5BQ9NTI5 1447 aa27.13■■□□□ 1.93
PPP4R3A-207ENST00000555029 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
PPP4R3A-207ENST00000555029 WIZO95785 1651 aa26.98■■□□□ 1.91
PPP4R3A-207ENST00000555029 MRC2Q9UBG0 1479 aa26.9■■□□□ 1.9
PPP4R3A-207ENST00000555029 WDR62O43379 1518 aa26.84■■□□□ 1.89
PPP4R3A-207ENST00000555029 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
PPP4R3A-207ENST00000555029 FANCD2Q9BXW9 1451 aa26.71■■□□□ 1.87
PPP4R3A-207ENST00000555029 CFTRP13569 1480 aa26.67■■□□□ 1.86
PPP4R3A-207ENST00000555029 RSF1Q96T23 1441 aaPredicted RBP26.66■■□□□ 1.86
PPP4R3A-207ENST00000555029 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
PPP4R3A-207ENST00000555029 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
PPP4R3A-207ENST00000555029 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
PPP4R3A-207ENST00000555029 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
PPP4R3A-207ENST00000555029 OSCARQ8IYS5 282 aa26.4■■□□□ 1.82
PPP4R3A-207ENST00000555029 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
PPP4R3A-207ENST00000555029 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
PPP4R3A-207ENST00000555029 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
PPP4R3A-207ENST00000555029 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
PPP4R3A-207ENST00000555029 ABCC8Q09428 1581 aa26.15■■□□□ 1.78
PPP4R3A-207ENST00000555029 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
PPP4R3A-207ENST00000555029 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
PPP4R3A-207ENST00000555029 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
PPP4R3A-207ENST00000555029 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
PPP4R3A-207ENST00000555029 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
PPP4R3A-207ENST00000555029 ARHGEF11O15085 1522 aa25.98■■□□□ 1.75
PPP4R3A-207ENST00000555029 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
PPP4R3A-207ENST00000555029 CHD1O14646 1710 aa25.92■■□□□ 1.74
PPP4R3A-207ENST00000555029 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.746e-8■■■■□ 19.4
PPP4R3A-207ENST00000555029 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
PPP4R3A-207ENST00000555029 FBLN2P98095 1184 aa25.8■■□□□ 1.72
PPP4R3A-207ENST00000555029 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
PPP4R3A-207ENST00000555029 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
PPP4R3A-207ENST00000555029 SOGA1O94964 1423 aa25.78■■□□□ 1.72
PPP4R3A-207ENST00000555029 TDRD9Q8NDG6 1382 aaKnown RBP25.73■■□□□ 1.71
PPP4R3A-207ENST00000555029 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
PPP4R3A-207ENST00000555029 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
PPP4R3A-207ENST00000555029 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
PPP4R3A-207ENST00000555029 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
PPP4R3A-207ENST00000555029 CUX1P39880 1505 aa25.66■■□□□ 1.7
PPP4R3A-207ENST00000555029 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
PPP4R3A-207ENST00000555029 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
PPP4R3A-207ENST00000555029 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
PPP4R3A-207ENST00000555029 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
PPP4R3A-207ENST00000555029 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
PPP4R3A-207ENST00000555029 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
PPP4R3A-207ENST00000555029 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
PPP4R3A-207ENST00000555029 PBRM1Q86U86 1689 aa25.51■■□□□ 1.67
PPP4R3A-207ENST00000555029 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
PPP4R3A-207ENST00000555029 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
PPP4R3A-207ENST00000555029 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
PPP4R3A-207ENST00000555029 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
PPP4R3A-207ENST00000555029 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
PPP4R3A-207ENST00000555029 GRIN2AQ12879 1464 aa25.26■■□□□ 1.63
PPP4R3A-207ENST00000555029 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
PPP4R3A-207ENST00000555029 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
PPP4R3A-207ENST00000555029 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
PPP4R3A-207ENST00000555029 NUP160Q12769 1436 aa25.17■■□□□ 1.62
PPP4R3A-207ENST00000555029 CEP170Q5SW79 1584 aa25.17■■□□□ 1.62
PPP4R3A-207ENST00000555029 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
PPP4R3A-207ENST00000555029 FHAD1B1AJZ9 1412 aa25.14■■□□□ 1.62
PPP4R3A-207ENST00000555029 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
PPP4R3A-207ENST00000555029 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
PPP4R3A-207ENST00000555029 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
PPP4R3A-207ENST00000555029 PRG4Q92954 1404 aaPredicted RBP24.94■■□□□ 1.58
PPP4R3A-207ENST00000555029 JPH4Q96JJ6 628 aa24.9■■□□□ 1.58
PPP4R3A-207ENST00000555029 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms