RNA–Protein interactions for RNA: ENST00000554869.5

LRR1-204, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,886 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-204ENST00000554869 NISCHQ9Y2I1 1504 aa43.29■■■■■ 4.52
LRR1-204ENST00000554869 CCDC180Q9P1Z9 1646 aa38.53■■■■□ 3.76
LRR1-204ENST00000554869 ABCC9O60706 1549 aa37.83■■■■□ 3.65
LRR1-204ENST00000554869 RB1CC1Q8TDY2 1594 aa36.34■■■■□ 3.41
LRR1-204ENST00000554869 DCAF8L2P0C7V8 631 aa36.28■■■■□ 3.4
LRR1-204ENST00000554869 NACADO15069 1562 aa36.27■■■■□ 3.4
LRR1-204ENST00000554869 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
LRR1-204ENST00000554869 MYO15BQ96JP2 1530 aa36.01■■■■□ 3.36
LRR1-204ENST00000554869 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
LRR1-204ENST00000554869 UNC13AQ9UPW8 1703 aa35.51■■■■□ 3.27
LRR1-204ENST00000554869 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
LRR1-204ENST00000554869 BICRAQ9NZM4 1560 aa35.23■■■■□ 3.23
LRR1-204ENST00000554869 SCRIBQ14160 1630 aa35.14■■■■□ 3.22
LRR1-204ENST00000554869 SHROOM4Q9ULL8 1493 aa34.85■■■■□ 3.17
LRR1-204ENST00000554869 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
LRR1-204ENST00000554869 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
LRR1-204ENST00000554869 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
LRR1-204ENST00000554869 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.03
LRR1-204ENST00000554869 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
LRR1-204ENST00000554869 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
LRR1-204ENST00000554869 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
LRR1-204ENST00000554869 ATAD2BQ9ULI0 1458 aa33.47■■■□□ 2.95
LRR1-204ENST00000554869 SMARCA2P51531 1590 aa33.42■■■□□ 2.94
LRR1-204ENST00000554869 MROH2BQ7Z745 1585 aa33.35■■■□□ 2.93
LRR1-204ENST00000554869 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
LRR1-204ENST00000554869 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
LRR1-204ENST00000554869 BAZ1BQ9UIG0 1483 aaKnown RBP33.19■■■□□ 2.9
LRR1-204ENST00000554869 WIZO95785 1651 aa33■■■□□ 2.87
LRR1-204ENST00000554869 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
LRR1-204ENST00000554869 NESP48681 1621 aa32.7■■■□□ 2.82
LRR1-204ENST00000554869 ERCC6Q03468 1493 aa32.63■■■□□ 2.81
LRR1-204ENST00000554869 TOP2AP11388 1531 aaKnown RBP32.63■■■□□ 2.81
LRR1-204ENST00000554869 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
LRR1-204ENST00000554869 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
LRR1-204ENST00000554869 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
LRR1-204ENST00000554869 CUX2O14529 1486 aa32.32■■■□□ 2.76
LRR1-204ENST00000554869 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
LRR1-204ENST00000554869 CCDC88BA6NC98 1476 aa32.27■■■□□ 2.76
LRR1-204ENST00000554869 CFTRP13569 1480 aa32.27■■■□□ 2.76
LRR1-204ENST00000554869 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
LRR1-204ENST00000554869 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
LRR1-204ENST00000554869 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
LRR1-204ENST00000554869 MRC2Q9UBG0 1479 aa32.06■■■□□ 2.72
LRR1-204ENST00000554869 SUPT5HO00267 1087 aaKnown RBP32.05■■■□□ 2.72
LRR1-204ENST00000554869 PRDM2Q13029 1718 aa32.01■■■□□ 2.71
LRR1-204ENST00000554869 WDR62O43379 1518 aa31.95■■■□□ 2.71
LRR1-204ENST00000554869 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
LRR1-204ENST00000554869 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
LRR1-204ENST00000554869 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
LRR1-204ENST00000554869 DNMBPQ6XZF7 1577 aa31.54■■■□□ 2.64
LRR1-204ENST00000554869 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
LRR1-204ENST00000554869 IFT140Q96RY7 1462 aa31.42■■■□□ 2.62
LRR1-204ENST00000554869 POLA1P09884 1462 aaPredicted RBP31.31■■■□□ 2.6
LRR1-204ENST00000554869 CUX1P39880 1505 aa31.3■■■□□ 2.6
LRR1-204ENST00000554869 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
LRR1-204ENST00000554869 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
LRR1-204ENST00000554869 FGD5Q6ZNL6 1462 aa31.22■■■□□ 2.59
LRR1-204ENST00000554869 SOGA1O94964 1423 aa31.21■■■□□ 2.59
LRR1-204ENST00000554869 RAD54L2Q9Y4B4 1467 aa31.18■■■□□ 2.58
LRR1-204ENST00000554869 EIF4G3O43432 1585 aaKnown RBP31.14■■■□□ 2.58
LRR1-204ENST00000554869 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.574e-6■■■□□ 17.6
LRR1-204ENST00000554869 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.56
LRR1-204ENST00000554869 TDRD9Q8NDG6 1382 aaKnown RBP31.04■■■□□ 2.56
LRR1-204ENST00000554869 TOP2BQ02880 1626 aa31■■■□□ 2.55
LRR1-204ENST00000554869 OSCARQ8IYS5 282 aa31■■■□□ 2.55
LRR1-204ENST00000554869 WDR97A6NE52 1622 aa31■■■□□ 2.55
LRR1-204ENST00000554869 BIVM-ERCC5R4GMW8 1640 aa30.99■■■□□ 2.55
LRR1-204ENST00000554869 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
LRR1-204ENST00000554869 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
LRR1-204ENST00000554869 GRIN2BQ13224 1484 aa30.84■■■□□ 2.53
LRR1-204ENST00000554869 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
LRR1-204ENST00000554869 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
LRR1-204ENST00000554869 FBLN2P98095 1184 aa30.79■■■□□ 2.52
LRR1-204ENST00000554869 ABCA5Q8WWZ7 1642 aa30.79■■■□□ 2.52
LRR1-204ENST00000554869 CHD1O14646 1710 aa30.78■■■□□ 2.52
LRR1-204ENST00000554869 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
LRR1-204ENST00000554869 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
LRR1-204ENST00000554869 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
LRR1-204ENST00000554869 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
LRR1-204ENST00000554869 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
LRR1-204ENST00000554869 ADAMTS12P58397 1594 aa30.5■■■□□ 2.47
LRR1-204ENST00000554869 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
LRR1-204ENST00000554869 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
LRR1-204ENST00000554869 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
LRR1-204ENST00000554869 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
LRR1-204ENST00000554869 ARHGEF11O15085 1522 aa30.45■■■□□ 2.47
LRR1-204ENST00000554869 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
LRR1-204ENST00000554869 KIF27Q86VH2 1401 aa30.44■■■□□ 2.46
LRR1-204ENST00000554869 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
LRR1-204ENST00000554869 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
LRR1-204ENST00000554869 IGF1RP08069 1367 aa30.34■■■□□ 2.45
LRR1-204ENST00000554869 NUP160Q12769 1436 aa30.31■■■□□ 2.44
LRR1-204ENST00000554869 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
LRR1-204ENST00000554869 CUL7Q14999 1698 aa30.24■■■□□ 2.43
LRR1-204ENST00000554869 CYB5RLQ6IPT4 315 aa30.22■■■□□ 2.43
LRR1-204ENST00000554869 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
LRR1-204ENST00000554869 CARMIL1Q5VZK9 1371 aa30.16■■■□□ 2.42
LRR1-204ENST00000554869 RUSC2Q8N2Y8 1516 aa30.11■■■□□ 2.41
LRR1-204ENST00000554869 SHROOM2Q13796 1616 aa30.08■■■□□ 2.41
LRR1-204ENST00000554869 JPH4Q96JJ6 628 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms