RNA–Protein interactions for RNA: ENST00000554724.5

ITGA7-211, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-211ENST00000554724 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
ITGA7-211ENST00000554724 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
ITGA7-211ENST00000554724 ABCC9O60706 1549 aa28.95■■■□□ 2.23
ITGA7-211ENST00000554724 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
ITGA7-211ENST00000554724 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
ITGA7-211ENST00000554724 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
ITGA7-211ENST00000554724 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
ITGA7-211ENST00000554724 NACADO15069 1562 aa28.16■■■□□ 2.1
ITGA7-211ENST00000554724 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
ITGA7-211ENST00000554724 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
ITGA7-211ENST00000554724 SCRIBQ14160 1630 aa27.56■■■□□ 2
ITGA7-211ENST00000554724 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
ITGA7-211ENST00000554724 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
ITGA7-211ENST00000554724 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
ITGA7-211ENST00000554724 EIF4G1Q04637 1599 aaKnown RBP26.46■■□□□ 1.83
ITGA7-211ENST00000554724 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
ITGA7-211ENST00000554724 BAZ1AQ9NRL2 1556 aaPredicted RBP26.39■■□□□ 1.82
ITGA7-211ENST00000554724 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
ITGA7-211ENST00000554724 CC2D2AQ9P2K1 1620 aa26.26■■□□□ 1.79
ITGA7-211ENST00000554724 MROH2BQ7Z745 1585 aa26.23■■□□□ 1.79
ITGA7-211ENST00000554724 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
ITGA7-211ENST00000554724 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
ITGA7-211ENST00000554724 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
ITGA7-211ENST00000554724 WIZO95785 1651 aa26.07■■□□□ 1.76
ITGA7-211ENST00000554724 ATAD2BQ9ULI0 1458 aa26.02■■□□□ 1.76
ITGA7-211ENST00000554724 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
ITGA7-211ENST00000554724 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
ITGA7-211ENST00000554724 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
ITGA7-211ENST00000554724 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
ITGA7-211ENST00000554724 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
ITGA7-211ENST00000554724 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
ITGA7-211ENST00000554724 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
ITGA7-211ENST00000554724 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
ITGA7-211ENST00000554724 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
ITGA7-211ENST00000554724 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
ITGA7-211ENST00000554724 CFTRP13569 1480 aa25.18■■□□□ 1.62
ITGA7-211ENST00000554724 NESP48681 1621 aa25.18■■□□□ 1.62
ITGA7-211ENST00000554724 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
ITGA7-211ENST00000554724 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
ITGA7-211ENST00000554724 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
ITGA7-211ENST00000554724 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
ITGA7-211ENST00000554724 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
ITGA7-211ENST00000554724 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
ITGA7-211ENST00000554724 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
ITGA7-211ENST00000554724 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
ITGA7-211ENST00000554724 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
ITGA7-211ENST00000554724 WDR62O43379 1518 aa24.65■■□□□ 1.54
ITGA7-211ENST00000554724 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
ITGA7-211ENST00000554724 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
ITGA7-211ENST00000554724 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
ITGA7-211ENST00000554724 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
ITGA7-211ENST00000554724 CUX1P39880 1505 aa24.59■■□□□ 1.53
ITGA7-211ENST00000554724 SYNJ1O43426 1573 aa24.58■■□□□ 1.52
ITGA7-211ENST00000554724 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
ITGA7-211ENST00000554724 CUX2O14529 1486 aa24.47■■□□□ 1.51
ITGA7-211ENST00000554724 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.5
ITGA7-211ENST00000554724 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
ITGA7-211ENST00000554724 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
ITGA7-211ENST00000554724 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
ITGA7-211ENST00000554724 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
ITGA7-211ENST00000554724 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
ITGA7-211ENST00000554724 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
ITGA7-211ENST00000554724 SOGA1O94964 1423 aa24.3■■□□□ 1.48
ITGA7-211ENST00000554724 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
ITGA7-211ENST00000554724 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
ITGA7-211ENST00000554724 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.47
ITGA7-211ENST00000554724 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
ITGA7-211ENST00000554724 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
ITGA7-211ENST00000554724 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
ITGA7-211ENST00000554724 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
ITGA7-211ENST00000554724 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
ITGA7-211ENST00000554724 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
ITGA7-211ENST00000554724 AQRO60306 1485 aaKnown RBP eCLIP24.05■■□□□ 1.44
ITGA7-211ENST00000554724 EEA1Q15075 1411 aa24.04■■□□□ 1.44
ITGA7-211ENST00000554724 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
ITGA7-211ENST00000554724 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
ITGA7-211ENST00000554724 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.43
ITGA7-211ENST00000554724 CUL7Q14999 1698 aa23.95■■□□□ 1.42
ITGA7-211ENST00000554724 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
ITGA7-211ENST00000554724 IGF1RP08069 1367 aa23.91■■□□□ 1.42
ITGA7-211ENST00000554724 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
ITGA7-211ENST00000554724 CHD1O14646 1710 aa23.89■■□□□ 1.41
ITGA7-211ENST00000554724 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
ITGA7-211ENST00000554724 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
ITGA7-211ENST00000554724 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
ITGA7-211ENST00000554724 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
ITGA7-211ENST00000554724 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
ITGA7-211ENST00000554724 SYNJ2O15056 1496 aa23.77■■□□□ 1.4
ITGA7-211ENST00000554724 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
ITGA7-211ENST00000554724 KIF21BO75037 1637 aa23.73■■□□□ 1.39
ITGA7-211ENST00000554724 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
ITGA7-211ENST00000554724 FBLN2P98095 1184 aa23.7■■□□□ 1.38
ITGA7-211ENST00000554724 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
ITGA7-211ENST00000554724 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
ITGA7-211ENST00000554724 CTTNBP2Q8WZ74 1663 aa23.66■■□□□ 1.38
ITGA7-211ENST00000554724 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
ITGA7-211ENST00000554724 CEP170Q5SW79 1584 aa23.59■■□□□ 1.37
ITGA7-211ENST00000554724 NUP160Q12769 1436 aa23.55■■□□□ 1.36
ITGA7-211ENST00000554724 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
ITGA7-211ENST00000554724 CLASP1Q7Z460 1538 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms