RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
GABRB3-207ENST00000554722 ABCC9O60706 1549 aa34.85■■■■□ 3.17
GABRB3-207ENST00000554722 CCDC180Q9P1Z9 1646 aa34.81■■■■□ 3.16
GABRB3-207ENST00000554722 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
GABRB3-207ENST00000554722 NACADO15069 1562 aa32.95■■■□□ 2.86
GABRB3-207ENST00000554722 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
GABRB3-207ENST00000554722 DNAJC5BQ9UF47 199 aa32.67■■■□□ 2.82
GABRB3-207ENST00000554722 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.8
GABRB3-207ENST00000554722 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
GABRB3-207ENST00000554722 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
GABRB3-207ENST00000554722 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
GABRB3-207ENST00000554722 BICRAQ9NZM4 1560 aa32.16■■■□□ 2.74
GABRB3-207ENST00000554722 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
GABRB3-207ENST00000554722 SHROOM4Q9ULL8 1493 aa31.82■■■□□ 2.68
GABRB3-207ENST00000554722 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
GABRB3-207ENST00000554722 CC2D2AQ9P2K1 1620 aa31.45■■■□□ 2.62
GABRB3-207ENST00000554722 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
GABRB3-207ENST00000554722 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
GABRB3-207ENST00000554722 NCAPD3P42695 1498 aa30.43■■■□□ 2.46
GABRB3-207ENST00000554722 SMARCA4P51532 1647 aa30.35■■■□□ 2.45
GABRB3-207ENST00000554722 ATAD2BQ9ULI0 1458 aa30.32■■■□□ 2.44
GABRB3-207ENST00000554722 SMARCA2P51531 1590 aa30.26■■■□□ 2.43
GABRB3-207ENST00000554722 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
GABRB3-207ENST00000554722 BAZ1AQ9NRL2 1556 aaPredicted RBP30.19■■■□□ 2.42
GABRB3-207ENST00000554722 ERCC6Q03468 1493 aa30.13■■■□□ 2.41
GABRB3-207ENST00000554722 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
GABRB3-207ENST00000554722 CUX2O14529 1486 aa30.06■■■□□ 2.4
GABRB3-207ENST00000554722 DNAJC5Q9H3Z4 198 aa30.06■■■□□ 2.4
GABRB3-207ENST00000554722 BAZ1BQ9UIG0 1483 aaKnown RBP30.05■■■□□ 2.4
GABRB3-207ENST00000554722 PEG3Q9GZU2 1588 aa30.02■■■□□ 2.4
GABRB3-207ENST00000554722 NESP48681 1621 aa29.91■■■□□ 2.38
GABRB3-207ENST00000554722 WIZO95785 1651 aa29.79■■■□□ 2.36
GABRB3-207ENST00000554722 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
GABRB3-207ENST00000554722 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
GABRB3-207ENST00000554722 THOC2Q8NI27 1593 aaKnown RBP29.59■■■□□ 2.33
GABRB3-207ENST00000554722 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
GABRB3-207ENST00000554722 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
GABRB3-207ENST00000554722 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
GABRB3-207ENST00000554722 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
GABRB3-207ENST00000554722 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
GABRB3-207ENST00000554722 WDR62O43379 1518 aa29.22■■■□□ 2.27
GABRB3-207ENST00000554722 CEP164Q9UPV0 1460 aa29.21■■■□□ 2.27
GABRB3-207ENST00000554722 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
GABRB3-207ENST00000554722 CFTRP13569 1480 aa29.17■■■□□ 2.26
GABRB3-207ENST00000554722 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
GABRB3-207ENST00000554722 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
GABRB3-207ENST00000554722 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
GABRB3-207ENST00000554722 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
GABRB3-207ENST00000554722 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
GABRB3-207ENST00000554722 IFT140Q96RY7 1462 aa28.64■■■□□ 2.17
GABRB3-207ENST00000554722 TOPBP1Q92547 1522 aa28.6■■■□□ 2.17
GABRB3-207ENST00000554722 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
GABRB3-207ENST00000554722 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
GABRB3-207ENST00000554722 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
GABRB3-207ENST00000554722 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
GABRB3-207ENST00000554722 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
GABRB3-207ENST00000554722 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
GABRB3-207ENST00000554722 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.12
GABRB3-207ENST00000554722 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
GABRB3-207ENST00000554722 RIMBP3CA6NJZ7 1639 aa28.26■■■□□ 2.11
GABRB3-207ENST00000554722 RIMBP3BA6NNM3 1639 aa28.26■■■□□ 2.11
GABRB3-207ENST00000554722 RIMBP3Q9UFD9 1639 aa28.26■■■□□ 2.11
GABRB3-207ENST00000554722 CUX1P39880 1505 aa28.23■■■□□ 2.11
GABRB3-207ENST00000554722 SOGA1O94964 1423 aa28.21■■■□□ 2.11
GABRB3-207ENST00000554722 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
GABRB3-207ENST00000554722 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
GABRB3-207ENST00000554722 FBLN2P98095 1184 aa28.17■■■□□ 2.1
GABRB3-207ENST00000554722 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
GABRB3-207ENST00000554722 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
GABRB3-207ENST00000554722 CHD1O14646 1710 aa28.13■■■□□ 2.09
GABRB3-207ENST00000554722 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
GABRB3-207ENST00000554722 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
GABRB3-207ENST00000554722 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
GABRB3-207ENST00000554722 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
GABRB3-207ENST00000554722 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
GABRB3-207ENST00000554722 MAGI1Q96QZ7 1491 aaPredicted RBP27.96■■■□□ 2.07
GABRB3-207ENST00000554722 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
GABRB3-207ENST00000554722 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.05
GABRB3-207ENST00000554722 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
GABRB3-207ENST00000554722 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
GABRB3-207ENST00000554722 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
GABRB3-207ENST00000554722 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
GABRB3-207ENST00000554722 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
GABRB3-207ENST00000554722 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
GABRB3-207ENST00000554722 ABCA10Q8WWZ4 1543 aa27.84■■■□□ 2.05
GABRB3-207ENST00000554722 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.05
GABRB3-207ENST00000554722 ABCA5Q8WWZ7 1642 aa27.81■■■□□ 2.04
GABRB3-207ENST00000554722 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
GABRB3-207ENST00000554722 GRIN2AQ12879 1464 aa27.59■■■□□ 2.01
GABRB3-207ENST00000554722 ADAMTS12P58397 1594 aa27.56■■■□□ 2
GABRB3-207ENST00000554722 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
GABRB3-207ENST00000554722 NUP160Q12769 1436 aa27.5■■□□□ 1.99
GABRB3-207ENST00000554722 ERICH3Q5RHP9 1530 aa27.48■■□□□ 1.99
GABRB3-207ENST00000554722 CEP170Q5SW79 1584 aa27.45■■□□□ 1.99
GABRB3-207ENST00000554722 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.98
GABRB3-207ENST00000554722 SHROOM2Q13796 1616 aa27.34■■□□□ 1.97
GABRB3-207ENST00000554722 PRG4Q92954 1404 aaPredicted RBP27.25■■□□□ 1.95
GABRB3-207ENST00000554722 JPH4Q96JJ6 628 aa27.25■■□□□ 1.95
GABRB3-207ENST00000554722 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
GABRB3-207ENST00000554722 IGF1RP08069 1367 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms