RNA–Protein interactions for RNA: ENST00000554704.5

RALGAPA1-210, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 2

Gene RALGAPA1, Length 2,698 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-210ENST00000554704 NISCHQ9Y2I1 1504 aa15.59■□□□□ 0.09
RALGAPA1-210ENST00000554704 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
RALGAPA1-210ENST00000554704 ZCCHC6Q5VYS8 1495 aaKnown RBP13.14□□□□□ -0.31
RALGAPA1-210ENST00000554704 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
RALGAPA1-210ENST00000554704 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
RALGAPA1-210ENST00000554704 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
RALGAPA1-210ENST00000554704 ABCC9O60706 1549 aa12.62□□□□□ -0.39
RALGAPA1-210ENST00000554704 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
RALGAPA1-210ENST00000554704 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
RALGAPA1-210ENST00000554704 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
RALGAPA1-210ENST00000554704 NACADO15069 1562 aa12.46□□□□□ -0.41
RALGAPA1-210ENST00000554704 RB1CC1Q8TDY2 1594 aa12.33□□□□□ -0.44
RALGAPA1-210ENST00000554704 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
RALGAPA1-210ENST00000554704 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
RALGAPA1-210ENST00000554704 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
RALGAPA1-210ENST00000554704 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
RALGAPA1-210ENST00000554704 MROH2BQ7Z745 1585 aa12.1□□□□□ -0.47
RALGAPA1-210ENST00000554704 WIZO95785 1651 aa12.05□□□□□ -0.48
RALGAPA1-210ENST00000554704 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
RALGAPA1-210ENST00000554704 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
RALGAPA1-210ENST00000554704 SMARCA4P51532 1647 aa11.96□□□□□ -0.49
RALGAPA1-210ENST00000554704 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.5
RALGAPA1-210ENST00000554704 TOP2AP11388 1531 aaKnown RBP11.84□□□□□ -0.51
RALGAPA1-210ENST00000554704 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
RALGAPA1-210ENST00000554704 SMARCA2P51531 1590 aa11.78□□□□□ -0.52
RALGAPA1-210ENST00000554704 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
RALGAPA1-210ENST00000554704 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
RALGAPA1-210ENST00000554704 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
RALGAPA1-210ENST00000554704 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.53
RALGAPA1-210ENST00000554704 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
RALGAPA1-210ENST00000554704 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
RALGAPA1-210ENST00000554704 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
RALGAPA1-210ENST00000554704 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
RALGAPA1-210ENST00000554704 HMGXB3Q12766 1538 aa11.52□□□□□ -0.57
RALGAPA1-210ENST00000554704 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
RALGAPA1-210ENST00000554704 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
RALGAPA1-210ENST00000554704 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
RALGAPA1-210ENST00000554704 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
RALGAPA1-210ENST00000554704 SOGA1O94964 1423 aa11.43□□□□□ -0.58
RALGAPA1-210ENST00000554704 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
RALGAPA1-210ENST00000554704 RUSC2Q8N2Y8 1516 aa11.42□□□□□ -0.58
RALGAPA1-210ENST00000554704 PCGF6Q9BYE7 350 aa11.37□□□□□ -0.59
RALGAPA1-210ENST00000554704 PRDM2Q13029 1718 aa11.36□□□□□ -0.59
RALGAPA1-210ENST00000554704 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
RALGAPA1-210ENST00000554704 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
RALGAPA1-210ENST00000554704 CFTRP13569 1480 aa11.33□□□□□ -0.6
RALGAPA1-210ENST00000554704 EEA1Q15075 1411 aa11.32□□□□□ -0.6
RALGAPA1-210ENST00000554704 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
RALGAPA1-210ENST00000554704 CUX1P39880 1505 aa11.29□□□□□ -0.6
RALGAPA1-210ENST00000554704 KIF21BO75037 1637 aa11.24□□□□□ -0.61
RALGAPA1-210ENST00000554704 GOLGA3Q08378 1498 aa11.24□□□□□ -0.61
RALGAPA1-210ENST00000554704 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
RALGAPA1-210ENST00000554704 TRIM26Q12899 539 aaPredicted RBP11.23□□□□□ -0.61
RALGAPA1-210ENST00000554704 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
RALGAPA1-210ENST00000554704 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
RALGAPA1-210ENST00000554704 CEP164Q9UPV0 1460 aa11.21□□□□□ -0.62
RALGAPA1-210ENST00000554704 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
RALGAPA1-210ENST00000554704 NESP48681 1621 aa11.18□□□□□ -0.62
RALGAPA1-210ENST00000554704 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
RALGAPA1-210ENST00000554704 HRCP23327 699 aa11.18□□□□□ -0.62
RALGAPA1-210ENST00000554704 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
RALGAPA1-210ENST00000554704 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
RALGAPA1-210ENST00000554704 FANCD2Q9BXW9 1451 aa11.14□□□□□ -0.63
RALGAPA1-210ENST00000554704 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
RALGAPA1-210ENST00000554704 PRXQ9BXM0 1461 aa11.12□□□□□ -0.63
RALGAPA1-210ENST00000554704 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
RALGAPA1-210ENST00000554704 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
RALGAPA1-210ENST00000554704 LAMC3Q9Y6N6 1575 aa11.1□□□□□ -0.63
RALGAPA1-210ENST00000554704 DNMBPQ6XZF7 1577 aa11.08□□□□□ -0.64
RALGAPA1-210ENST00000554704 CLIP1P30622 1438 aa11.08□□□□□ -0.64
RALGAPA1-210ENST00000554704 CUX2O14529 1486 aa11.07□□□□□ -0.64
RALGAPA1-210ENST00000554704 KIF21AQ7Z4S6 1674 aa11.07□□□□□ -0.64
RALGAPA1-210ENST00000554704 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
RALGAPA1-210ENST00000554704 TTBK1Q5TCY1 1321 aaPredicted RBP11.05□□□□□ -0.64
RALGAPA1-210ENST00000554704 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
RALGAPA1-210ENST00000554704 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
RALGAPA1-210ENST00000554704 RAD54L2Q9Y4B4 1467 aa11.03□□□□□ -0.64
RALGAPA1-210ENST00000554704 URB2Q14146 1524 aaKnown RBP11.03□□□□□ -0.64
RALGAPA1-210ENST00000554704 IGF1RP08069 1367 aa11.02□□□□□ -0.65
RALGAPA1-210ENST00000554704 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
RALGAPA1-210ENST00000554704 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
RALGAPA1-210ENST00000554704 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
RALGAPA1-210ENST00000554704 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
RALGAPA1-210ENST00000554704 PDS5BQ9NTI5 1447 aa10.97□□□□□ -0.65
RALGAPA1-210ENST00000554704 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.66
RALGAPA1-210ENST00000554704 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
RALGAPA1-210ENST00000554704 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
RALGAPA1-210ENST00000554704 CUL7Q14999 1698 aa10.91□□□□□ -0.66
RALGAPA1-210ENST00000554704 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
RALGAPA1-210ENST00000554704 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
RALGAPA1-210ENST00000554704 TDRD9Q8NDG6 1382 aaKnown RBP10.88□□□□□ -0.67
RALGAPA1-210ENST00000554704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
RALGAPA1-210ENST00000554704 GAPVD1Q14C86 1478 aa10.86□□□□□ -0.67
RALGAPA1-210ENST00000554704 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
RALGAPA1-210ENST00000554704 PBRM1Q86U86 1689 aa10.85□□□□□ -0.67
RALGAPA1-210ENST00000554704 APLP2Q06481 763 aa10.85□□□□□ -0.67
RALGAPA1-210ENST00000554704 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
RALGAPA1-210ENST00000554704 ZEB1P37275 1124 aaPredicted RBP10.82□□□□□ -0.68
RALGAPA1-210ENST00000554704 WDR62O43379 1518 aa10.8□□□□□ -0.68
RALGAPA1-210ENST00000554704 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms