RNA–Protein interactions for RNA: ENST00000554652.5

RALGAPA1-209, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 2

Gene RALGAPA1, Length 4,487 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-209ENST00000554652 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
RALGAPA1-209ENST00000554652 CCDC180Q9P1Z9 1646 aa10.39□□□□□ -0.75
RALGAPA1-209ENST00000554652 ABCC9O60706 1549 aa9.78□□□□□ -0.84
RALGAPA1-209ENST00000554652 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
RALGAPA1-209ENST00000554652 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
RALGAPA1-209ENST00000554652 NACADO15069 1562 aa9.74□□□□□ -0.85
RALGAPA1-209ENST00000554652 ZCCHC6Q5VYS8 1495 aaKnown RBP9.72□□□□□ -0.85
RALGAPA1-209ENST00000554652 RB1CC1Q8TDY2 1594 aa9.71□□□□□ -0.85
RALGAPA1-209ENST00000554652 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
RALGAPA1-209ENST00000554652 SHROOM4Q9ULL8 1493 aa9.46□□□□□ -0.9
RALGAPA1-209ENST00000554652 SCRIBQ14160 1630 aa9.32□□□□□ -0.92
RALGAPA1-209ENST00000554652 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
RALGAPA1-209ENST00000554652 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
RALGAPA1-209ENST00000554652 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
RALGAPA1-209ENST00000554652 BICRAQ9NZM4 1560 aa9.08□□□□□ -0.96
RALGAPA1-209ENST00000554652 SMARCA2P51531 1590 aa9.05□□□□□ -0.96
RALGAPA1-209ENST00000554652 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
RALGAPA1-209ENST00000554652 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
RALGAPA1-209ENST00000554652 BAZ1BQ9UIG0 1483 aaKnown RBP8.93□□□□□ -0.98
RALGAPA1-209ENST00000554652 HMGXB3Q12766 1538 aa8.92□□□□□ -0.98
RALGAPA1-209ENST00000554652 PEG3Q9GZU2 1588 aa8.9□□□□□ -0.98
RALGAPA1-209ENST00000554652 NCAPD3P42695 1498 aa8.89□□□□□ -0.99
RALGAPA1-209ENST00000554652 RSF1Q96T23 1441 aaPredicted RBP8.87□□□□□ -0.99
RALGAPA1-209ENST00000554652 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
RALGAPA1-209ENST00000554652 ATAD2BQ9ULI0 1458 aa8.87□□□□□ -0.99
RALGAPA1-209ENST00000554652 TOP2AP11388 1531 aaKnown RBP8.86□□□□□ -0.99
RALGAPA1-209ENST00000554652 CC2D2AQ9P2K1 1620 aa8.86□□□□□ -0.99
RALGAPA1-209ENST00000554652 CECR2Q9BXF3 1484 aa8.85□□□□□ -0.99
RALGAPA1-209ENST00000554652 MROH2BQ7Z745 1585 aa8.84□□□□□ -0.99
RALGAPA1-209ENST00000554652 WIZO95785 1651 aa8.75□□□□□ -1.01
RALGAPA1-209ENST00000554652 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.01
RALGAPA1-209ENST00000554652 LAMC3Q9Y6N6 1575 aa8.7□□□□□ -1.02
RALGAPA1-209ENST00000554652 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
RALGAPA1-209ENST00000554652 CADPSQ9ULU8 1353 aa8.66□□□□□ -1.02
RALGAPA1-209ENST00000554652 CCDC88BA6NC98 1476 aa8.63□□□□□ -1.03
RALGAPA1-209ENST00000554652 ERCC6Q03468 1493 aa8.63□□□□□ -1.03
RALGAPA1-209ENST00000554652 PRDM2Q13029 1718 aa8.61□□□□□ -1.03
RALGAPA1-209ENST00000554652 CFTRP13569 1480 aa8.6□□□□□ -1.03
RALGAPA1-209ENST00000554652 CEP164Q9UPV0 1460 aa8.6□□□□□ -1.03
RALGAPA1-209ENST00000554652 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
RALGAPA1-209ENST00000554652 MRC2Q9UBG0 1479 aa8.53□□□□□ -1.04
RALGAPA1-209ENST00000554652 TRIM41Q8WV44 630 aa8.51□□□□□ -1.05
RALGAPA1-209ENST00000554652 WRNQ14191 1432 aaPredicted RBP eCLIP8.51□□□□□ -1.05
RALGAPA1-209ENST00000554652 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
RALGAPA1-209ENST00000554652 EEA1Q15075 1411 aa8.5□□□□□ -1.05
RALGAPA1-209ENST00000554652 DNAJC5BQ9UF47 199 aa8.5□□□□□ -1.05
RALGAPA1-209ENST00000554652 DNMBPQ6XZF7 1577 aa8.48□□□□□ -1.05
RALGAPA1-209ENST00000554652 WDR97A6NE52 1622 aa8.47□□□□□ -1.05
RALGAPA1-209ENST00000554652 CUX2O14529 1486 aa8.46□□□□□ -1.05
RALGAPA1-209ENST00000554652 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
RALGAPA1-209ENST00000554652 WDR62O43379 1518 aa8.41□□□□□ -1.06
RALGAPA1-209ENST00000554652 KIF27Q86VH2 1401 aa8.41□□□□□ -1.06
RALGAPA1-209ENST00000554652 TOP2BQ02880 1626 aa8.41□□□□□ -1.06
RALGAPA1-209ENST00000554652 NESP48681 1621 aa8.4□□□□□ -1.06
RALGAPA1-209ENST00000554652 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.06
RALGAPA1-209ENST00000554652 TOPBP1Q92547 1522 aa8.4□□□□□ -1.07
RALGAPA1-209ENST00000554652 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
RALGAPA1-209ENST00000554652 SOGA1O94964 1423 aa8.37□□□□□ -1.07
RALGAPA1-209ENST00000554652 FGD5Q6ZNL6 1462 aa8.35□□□□□ -1.07
RALGAPA1-209ENST00000554652 CHIC1Q5VXU3 224 aa8.35□□□□□ -1.07
RALGAPA1-209ENST00000554652 THOC2Q8NI27 1593 aaKnown RBP8.33□□□□□ -1.08
RALGAPA1-209ENST00000554652 CUX1P39880 1505 aa8.32□□□□□ -1.08
RALGAPA1-209ENST00000554652 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
RALGAPA1-209ENST00000554652 URB2Q14146 1524 aaKnown RBP8.32□□□□□ -1.08
RALGAPA1-209ENST00000554652 POLA1P09884 1462 aaPredicted RBP8.31□□□□□ -1.08
RALGAPA1-209ENST00000554652 GRIN2BQ13224 1484 aa8.3□□□□□ -1.08
RALGAPA1-209ENST00000554652 CUL7Q14999 1698 aa8.29□□□□□ -1.08
RALGAPA1-209ENST00000554652 SYNJ1O43426 1573 aa8.28□□□□□ -1.08
RALGAPA1-209ENST00000554652 ERICH3Q5RHP9 1530 aa8.28□□□□□ -1.08
RALGAPA1-209ENST00000554652 GAPVD1Q14C86 1478 aa8.28□□□□□ -1.08
RALGAPA1-209ENST00000554652 MAGI1Q96QZ7 1491 aaPredicted RBP8.28□□□□□ -1.08
RALGAPA1-209ENST00000554652 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
RALGAPA1-209ENST00000554652 FHAD1B1AJZ9 1412 aa8.25□□□□□ -1.09
RALGAPA1-209ENST00000554652 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
RALGAPA1-209ENST00000554652 CHMP7Q8WUX9 453 aaPredicted RBP8.24□□□□□ -1.09
RALGAPA1-209ENST00000554652 RAPGEF2Q9Y4G8 1499 aa8.22□□□□□ -1.09
RALGAPA1-209ENST00000554652 CARMIL1Q5VZK9 1371 aa8.21□□□□□ -1.09
RALGAPA1-209ENST00000554652 UBTFP17480 764 aaKnown RBP8.21□□□□□ -1.09
RALGAPA1-209ENST00000554652 TARBP1Q13395 1621 aaKnown RBP8.2□□□□□ -1.1
RALGAPA1-209ENST00000554652 SYNJ2O15056 1496 aa8.2□□□□□ -1.1
RALGAPA1-209ENST00000554652 KIF21BO75037 1637 aa8.2□□□□□ -1.1
RALGAPA1-209ENST00000554652 ABCA5Q8WWZ7 1642 aa8.2□□□□□ -1.1
RALGAPA1-209ENST00000554652 RAD54L2Q9Y4B4 1467 aa8.19□□□□□ -1.1
RALGAPA1-209ENST00000554652 EIF4G3O43432 1585 aaKnown RBP8.19□□□□□ -1.1
RALGAPA1-209ENST00000554652 PBRM1Q86U86 1689 aa8.19□□□□□ -1.1
RALGAPA1-209ENST00000554652 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
RALGAPA1-209ENST00000554652 APLP2Q06481 763 aa8.18□□□□□ -1.1
RALGAPA1-209ENST00000554652 CARMIL2Q6F5E8 1435 aa8.18□□□□□ -1.1
RALGAPA1-209ENST00000554652 FBLN2P98095 1184 aa8.17□□□□□ -1.1
RALGAPA1-209ENST00000554652 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
RALGAPA1-209ENST00000554652 ADAMTS12P58397 1594 aa8.16□□□□□ -1.1
RALGAPA1-209ENST00000554652 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.111e-6■■■□□ 18.8
RALGAPA1-209ENST00000554652 IGF1RP08069 1367 aa8.13□□□□□ -1.11
RALGAPA1-209ENST00000554652 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
RALGAPA1-209ENST00000554652 TNIKQ9UKE5 1360 aa8.13□□□□□ -1.11
RALGAPA1-209ENST00000554652 EFCAB5A4FU69 1503 aa8.12□□□□□ -1.11
RALGAPA1-209ENST00000554652 GRIN2AQ12879 1464 aa8.12□□□□□ -1.11
RALGAPA1-209ENST00000554652 PRXQ9BXM0 1461 aa8.12□□□□□ -1.11
RALGAPA1-209ENST00000554652 KIAA0586Q9BVV6 1533 aa8.11□□□□□ -1.11
RALGAPA1-209ENST00000554652 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms