RNA–Protein interactions for RNA: ENST00000554625.5

APOPT1-212, Transcript of apoptogenic 1, mitochondrial, humanhuman

TSL 3

Gene APOPT1, Length 447 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOPT1-212ENST00000554625 NISCHQ9Y2I1 1504 aa46.81■■■■■ 5.08
APOPT1-212ENST00000554625 ABCC9O60706 1549 aa42■■■■■ 4.31
APOPT1-212ENST00000554625 CCDC180Q9P1Z9 1646 aa41.9■■■■■ 4.3
APOPT1-212ENST00000554625 RB1CC1Q8TDY2 1594 aa39.86■■■■□ 3.97
APOPT1-212ENST00000554625 DCAF8L2P0C7V8 631 aa39.7■■■■□ 3.95
APOPT1-212ENST00000554625 NACADO15069 1562 aa39.56■■■■□ 3.92
APOPT1-212ENST00000554625 DNAJC5BQ9UF47 199 aa39.28■■■■□ 3.88
APOPT1-212ENST00000554625 PABPN1Q86U42 306 aaKnown RBP eCLIP39.16■■■■□ 3.86
APOPT1-212ENST00000554625 UNC13AQ9UPW8 1703 aa39.08■■■■□ 3.85
APOPT1-212ENST00000554625 MYO15BQ96JP2 1530 aa38.93■■■■□ 3.82
APOPT1-212ENST00000554625 ZCCHC6Q5VYS8 1495 aaKnown RBP38.82■■■■□ 3.81
APOPT1-212ENST00000554625 BICRAQ9NZM4 1560 aa38.75■■■■□ 3.79
APOPT1-212ENST00000554625 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
APOPT1-212ENST00000554625 SCRIBQ14160 1630 aa38.4■■■■□ 3.74
APOPT1-212ENST00000554625 SHROOM4Q9ULL8 1493 aa38■■■■□ 3.67
APOPT1-212ENST00000554625 CC2D2AQ9P2K1 1620 aa37.87■■■■□ 3.65
APOPT1-212ENST00000554625 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
APOPT1-212ENST00000554625 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
APOPT1-212ENST00000554625 SMARCA4P51532 1647 aa36.53■■■■□ 3.44
APOPT1-212ENST00000554625 NCAPD3P42695 1498 aa36.52■■■■□ 3.44
APOPT1-212ENST00000554625 ATAD2BQ9ULI0 1458 aa36.5■■■■□ 3.43
APOPT1-212ENST00000554625 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
APOPT1-212ENST00000554625 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
APOPT1-212ENST00000554625 HMGXB3Q12766 1538 aa36.27■■■■□ 3.4
APOPT1-212ENST00000554625 ERCC6Q03468 1493 aa36.2■■■■□ 3.39
APOPT1-212ENST00000554625 BAZ1BQ9UIG0 1483 aaKnown RBP36.19■■■■□ 3.38
APOPT1-212ENST00000554625 MROH2BQ7Z745 1585 aa36.16■■■■□ 3.38
APOPT1-212ENST00000554625 NESP48681 1621 aa36.12■■■■□ 3.37
APOPT1-212ENST00000554625 PEG3Q9GZU2 1588 aa36.05■■■■□ 3.36
APOPT1-212ENST00000554625 CUX2O14529 1486 aa35.94■■■■□ 3.34
APOPT1-212ENST00000554625 DNAJC5Q9H3Z4 198 aa35.84■■■■□ 3.33
APOPT1-212ENST00000554625 WIZO95785 1651 aa35.78■■■■□ 3.32
APOPT1-212ENST00000554625 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
APOPT1-212ENST00000554625 KIF21AQ7Z4S6 1674 aa35.64■■■■□ 3.3
APOPT1-212ENST00000554625 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
APOPT1-212ENST00000554625 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
APOPT1-212ENST00000554625 CADPSQ9ULU8 1353 aa35.47■■■■□ 3.27
APOPT1-212ENST00000554625 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
APOPT1-212ENST00000554625 MRC2Q9UBG0 1479 aa35.24■■■■□ 3.23
APOPT1-212ENST00000554625 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
APOPT1-212ENST00000554625 CEP164Q9UPV0 1460 aa35.14■■■■□ 3.22
APOPT1-212ENST00000554625 FANCD2Q9BXW9 1451 aa35.13■■■■□ 3.21
APOPT1-212ENST00000554625 WDR62O43379 1518 aa35.12■■■■□ 3.21
APOPT1-212ENST00000554625 CFTRP13569 1480 aa35.07■■■■□ 3.2
APOPT1-212ENST00000554625 CCDC88BA6NC98 1476 aa34.87■■■■□ 3.17
APOPT1-212ENST00000554625 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
APOPT1-212ENST00000554625 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
APOPT1-212ENST00000554625 TRIM41Q8WV44 630 aa34.55■■■■□ 3.12
APOPT1-212ENST00000554625 TOPBP1Q92547 1522 aa34.47■■■■□ 3.11
APOPT1-212ENST00000554625 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
APOPT1-212ENST00000554625 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
APOPT1-212ENST00000554625 OSCARQ8IYS5 282 aa34.38■■■■□ 3.09
APOPT1-212ENST00000554625 DNMBPQ6XZF7 1577 aa34.33■■■■□ 3.09
APOPT1-212ENST00000554625 ABCC8Q09428 1581 aa34.26■■■■□ 3.07
APOPT1-212ENST00000554625 EIF4G3O43432 1585 aaKnown RBP34.23■■■■□ 3.07
APOPT1-212ENST00000554625 TARBP1Q13395 1621 aaKnown RBP34.15■■■■□ 3.06
APOPT1-212ENST00000554625 AQRO60306 1485 aaKnown RBP eCLIP34.14■■■■□ 3.06
APOPT1-212ENST00000554625 SUPT5HO00267 1087 aaKnown RBP34.13■■■■□ 3.05
APOPT1-212ENST00000554625 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
APOPT1-212ENST00000554625 RAD54L2Q9Y4B4 1467 aa34.09■■■■□ 3.05
APOPT1-212ENST00000554625 RIMBP3CA6NJZ7 1639 aa34.01■■■■□ 3.04
APOPT1-212ENST00000554625 RIMBP3BA6NNM3 1639 aa34.01■■■■□ 3.04
APOPT1-212ENST00000554625 RIMBP3Q9UFD9 1639 aa34.01■■■■□ 3.04
APOPT1-212ENST00000554625 CHD1O14646 1710 aa34■■■■□ 3.03
APOPT1-212ENST00000554625 SOGA1O94964 1423 aa33.97■■■■□ 3.03
APOPT1-212ENST00000554625 FGD5Q6ZNL6 1462 aa33.97■■■■□ 3.03
APOPT1-212ENST00000554625 FBLN2P98095 1184 aa33.97■■■■□ 3.03
APOPT1-212ENST00000554625 TDRD9Q8NDG6 1382 aaKnown RBP33.97■■■■□ 3.03
APOPT1-212ENST00000554625 CUX1P39880 1505 aa33.96■■■■□ 3.03
APOPT1-212ENST00000554625 ARHGEF11O15085 1522 aa33.89■■■■□ 3.02
APOPT1-212ENST00000554625 SNAPC4Q5SXM2 1469 aa33.79■■■■□ 3
APOPT1-212ENST00000554625 CYB5RLQ6IPT4 315 aa33.69■■■□□ 2.98
APOPT1-212ENST00000554625 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
APOPT1-212ENST00000554625 GRIN2BQ13224 1484 aa33.63■■■□□ 2.97
APOPT1-212ENST00000554625 CHMP7Q8WUX9 453 aaPredicted RBP33.63■■■□□ 2.97
APOPT1-212ENST00000554625 PBRM1Q86U86 1689 aa33.59■■■□□ 2.97
APOPT1-212ENST00000554625 ARAP1Q96P48 1450 aa33.58■■■□□ 2.97
APOPT1-212ENST00000554625 MAGI1Q96QZ7 1491 aaPredicted RBP33.58■■■□□ 2.97
APOPT1-212ENST00000554625 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
APOPT1-212ENST00000554625 CLASP1Q7Z460 1538 aa33.51■■■□□ 2.95
APOPT1-212ENST00000554625 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
APOPT1-212ENST00000554625 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
APOPT1-212ENST00000554625 SYNJ1O43426 1573 aa33.49■■■□□ 2.95
APOPT1-212ENST00000554625 ABCA5Q8WWZ7 1642 aa33.48■■■□□ 2.95
APOPT1-212ENST00000554625 WRNQ14191 1432 aaPredicted RBP eCLIP33.4■■■□□ 2.94
APOPT1-212ENST00000554625 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
APOPT1-212ENST00000554625 TOP2BQ02880 1626 aa33.39■■■□□ 2.93
APOPT1-212ENST00000554625 TRHP20396 242 aaPredicted RBP33.32■■■□□ 2.92
APOPT1-212ENST00000554625 ADAMTS12P58397 1594 aa33.25■■■□□ 2.91
APOPT1-212ENST00000554625 GRIN2AQ12879 1464 aa33.23■■■□□ 2.91
APOPT1-212ENST00000554625 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
APOPT1-212ENST00000554625 ERCC6L2Q5T890 1561 aa33.13■■■□□ 2.89
APOPT1-212ENST00000554625 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
APOPT1-212ENST00000554625 NUP160Q12769 1436 aa33.06■■■□□ 2.88
APOPT1-212ENST00000554625 ERICH3Q5RHP9 1530 aa33.06■■■□□ 2.88
APOPT1-212ENST00000554625 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
APOPT1-212ENST00000554625 PRG4Q92954 1404 aaPredicted RBP32.82■■■□□ 2.84
APOPT1-212ENST00000554625 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
APOPT1-212ENST00000554625 JPH4Q96JJ6 628 aa32.76■■■□□ 2.83
APOPT1-212ENST00000554625 KIF27Q86VH2 1401 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms