RNA–Protein interactions for RNA: ENST00000554548.1

AL139317.1-201, humanhuman

TSL 3 BASIC

Gene AL139317.1, Length 196 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139317.1-201ENST00000554548 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
AL139317.1-201ENST00000554548 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
AL139317.1-201ENST00000554548 ABCC9O60706 1549 aa25.04■■□□□ 1.6
AL139317.1-201ENST00000554548 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
AL139317.1-201ENST00000554548 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
AL139317.1-201ENST00000554548 NACADO15069 1562 aa23.85■■□□□ 1.41
AL139317.1-201ENST00000554548 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
AL139317.1-201ENST00000554548 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
AL139317.1-201ENST00000554548 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
AL139317.1-201ENST00000554548 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
AL139317.1-201ENST00000554548 UNC13AQ9UPW8 1703 aa23.37■■□□□ 1.33
AL139317.1-201ENST00000554548 BICRAQ9NZM4 1560 aa23.19■■□□□ 1.3
AL139317.1-201ENST00000554548 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
AL139317.1-201ENST00000554548 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
AL139317.1-201ENST00000554548 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
AL139317.1-201ENST00000554548 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
AL139317.1-201ENST00000554548 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
AL139317.1-201ENST00000554548 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
AL139317.1-201ENST00000554548 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
AL139317.1-201ENST00000554548 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
AL139317.1-201ENST00000554548 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
AL139317.1-201ENST00000554548 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
AL139317.1-201ENST00000554548 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
AL139317.1-201ENST00000554548 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
AL139317.1-201ENST00000554548 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
AL139317.1-201ENST00000554548 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
AL139317.1-201ENST00000554548 PEG3Q9GZU2 1588 aa21.79■■□□□ 1.08
AL139317.1-201ENST00000554548 WIZO95785 1651 aa21.69■■□□□ 1.06
AL139317.1-201ENST00000554548 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
AL139317.1-201ENST00000554548 NESP48681 1621 aa21.6■■□□□ 1.05
AL139317.1-201ENST00000554548 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
AL139317.1-201ENST00000554548 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
AL139317.1-201ENST00000554548 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
AL139317.1-201ENST00000554548 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
AL139317.1-201ENST00000554548 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
AL139317.1-201ENST00000554548 CUX2O14529 1486 aa21.35■■□□□ 1.01
AL139317.1-201ENST00000554548 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
AL139317.1-201ENST00000554548 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
AL139317.1-201ENST00000554548 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
AL139317.1-201ENST00000554548 CFTRP13569 1480 aa21.2■□□□□ 0.98
AL139317.1-201ENST00000554548 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
AL139317.1-201ENST00000554548 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
AL139317.1-201ENST00000554548 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
AL139317.1-201ENST00000554548 SUPT5HO00267 1087 aaKnown RBP21.08■□□□□ 0.97
AL139317.1-201ENST00000554548 WDR62O43379 1518 aa21.03■□□□□ 0.96
AL139317.1-201ENST00000554548 DNAJC5Q9H3Z4 198 aa21■□□□□ 0.95
AL139317.1-201ENST00000554548 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
AL139317.1-201ENST00000554548 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
AL139317.1-201ENST00000554548 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
AL139317.1-201ENST00000554548 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
AL139317.1-201ENST00000554548 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
AL139317.1-201ENST00000554548 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
AL139317.1-201ENST00000554548 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.9
AL139317.1-201ENST00000554548 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.89
AL139317.1-201ENST00000554548 SOGA1O94964 1423 aa20.57■□□□□ 0.88
AL139317.1-201ENST00000554548 CUX1P39880 1505 aa20.56■□□□□ 0.88
AL139317.1-201ENST00000554548 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
AL139317.1-201ENST00000554548 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
AL139317.1-201ENST00000554548 TARBP1Q13395 1621 aaKnown RBP20.54■□□□□ 0.88
AL139317.1-201ENST00000554548 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88
AL139317.1-201ENST00000554548 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
AL139317.1-201ENST00000554548 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
AL139317.1-201ENST00000554548 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
AL139317.1-201ENST00000554548 FBLN2P98095 1184 aa20.44■□□□□ 0.86
AL139317.1-201ENST00000554548 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
AL139317.1-201ENST00000554548 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
AL139317.1-201ENST00000554548 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
AL139317.1-201ENST00000554548 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
AL139317.1-201ENST00000554548 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
AL139317.1-201ENST00000554548 CHD1O14646 1710 aa20.31■□□□□ 0.84
AL139317.1-201ENST00000554548 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
AL139317.1-201ENST00000554548 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
AL139317.1-201ENST00000554548 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
AL139317.1-201ENST00000554548 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
AL139317.1-201ENST00000554548 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
AL139317.1-201ENST00000554548 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
AL139317.1-201ENST00000554548 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
AL139317.1-201ENST00000554548 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
AL139317.1-201ENST00000554548 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
AL139317.1-201ENST00000554548 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
AL139317.1-201ENST00000554548 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
AL139317.1-201ENST00000554548 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
AL139317.1-201ENST00000554548 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
AL139317.1-201ENST00000554548 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
AL139317.1-201ENST00000554548 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
AL139317.1-201ENST00000554548 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
AL139317.1-201ENST00000554548 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
AL139317.1-201ENST00000554548 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
AL139317.1-201ENST00000554548 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
AL139317.1-201ENST00000554548 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
AL139317.1-201ENST00000554548 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
AL139317.1-201ENST00000554548 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
AL139317.1-201ENST00000554548 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
AL139317.1-201ENST00000554548 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
AL139317.1-201ENST00000554548 IGF1RP08069 1367 aa19.93■□□□□ 0.78
AL139317.1-201ENST00000554548 NUP160Q12769 1436 aa19.91■□□□□ 0.78
AL139317.1-201ENST00000554548 CUL7Q14999 1698 aa19.84■□□□□ 0.77
AL139317.1-201ENST00000554548 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
AL139317.1-201ENST00000554548 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
AL139317.1-201ENST00000554548 ERCC6L2Q5T890 1561 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms