RNA–Protein interactions for RNA: ENST00000554545.1

CDK2-205, Transcript of cyclin dependent kinase 2, humanhuman

TSL 2

Gene CDK2, Length 445 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-205ENST00000554545 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.57
CDK2-205ENST00000554545 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
CDK2-205ENST00000554545 ABCC9O60706 1549 aa27.33■■□□□ 1.97
CDK2-205ENST00000554545 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
CDK2-205ENST00000554545 NACADO15069 1562 aa26.23■■□□□ 1.79
CDK2-205ENST00000554545 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
CDK2-205ENST00000554545 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
CDK2-205ENST00000554545 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
CDK2-205ENST00000554545 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
CDK2-205ENST00000554545 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
CDK2-205ENST00000554545 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
CDK2-205ENST00000554545 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
CDK2-205ENST00000554545 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
CDK2-205ENST00000554545 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
CDK2-205ENST00000554545 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
CDK2-205ENST00000554545 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
CDK2-205ENST00000554545 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
CDK2-205ENST00000554545 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
CDK2-205ENST00000554545 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
CDK2-205ENST00000554545 BAZ1AQ9NRL2 1556 aaPredicted RBP24.18■■□□□ 1.46
CDK2-205ENST00000554545 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
CDK2-205ENST00000554545 SMARCA2P51531 1590 aa24.13■■□□□ 1.45
CDK2-205ENST00000554545 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
CDK2-205ENST00000554545 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
CDK2-205ENST00000554545 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
CDK2-205ENST00000554545 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
CDK2-205ENST00000554545 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
CDK2-205ENST00000554545 WIZO95785 1651 aa23.74■■□□□ 1.39
CDK2-205ENST00000554545 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
CDK2-205ENST00000554545 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
CDK2-205ENST00000554545 NESP48681 1621 aa23.59■■□□□ 1.37
CDK2-205ENST00000554545 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.36
CDK2-205ENST00000554545 CUX2O14529 1486 aa23.49■■□□□ 1.35
CDK2-205ENST00000554545 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
CDK2-205ENST00000554545 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
CDK2-205ENST00000554545 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
CDK2-205ENST00000554545 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
CDK2-205ENST00000554545 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
CDK2-205ENST00000554545 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
CDK2-205ENST00000554545 CFTRP13569 1480 aa23.24■■□□□ 1.31
CDK2-205ENST00000554545 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
CDK2-205ENST00000554545 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
CDK2-205ENST00000554545 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
CDK2-205ENST00000554545 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
CDK2-205ENST00000554545 WDR62O43379 1518 aa23.13■■□□□ 1.29
CDK2-205ENST00000554545 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
CDK2-205ENST00000554545 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
CDK2-205ENST00000554545 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
CDK2-205ENST00000554545 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
CDK2-205ENST00000554545 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
CDK2-205ENST00000554545 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
CDK2-205ENST00000554545 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
CDK2-205ENST00000554545 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
CDK2-205ENST00000554545 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
CDK2-205ENST00000554545 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
CDK2-205ENST00000554545 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
CDK2-205ENST00000554545 CUX1P39880 1505 aa22.49■■□□□ 1.19
CDK2-205ENST00000554545 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
CDK2-205ENST00000554545 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
CDK2-205ENST00000554545 SOGA1O94964 1423 aa22.43■■□□□ 1.18
CDK2-205ENST00000554545 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
CDK2-205ENST00000554545 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
CDK2-205ENST00000554545 AQRO60306 1485 aaKnown RBP eCLIP22.39■■□□□ 1.17
CDK2-205ENST00000554545 CHD1O14646 1710 aa22.36■■□□□ 1.17
CDK2-205ENST00000554545 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
CDK2-205ENST00000554545 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
CDK2-205ENST00000554545 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
CDK2-205ENST00000554545 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
CDK2-205ENST00000554545 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
CDK2-205ENST00000554545 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
CDK2-205ENST00000554545 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
CDK2-205ENST00000554545 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
CDK2-205ENST00000554545 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
CDK2-205ENST00000554545 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
CDK2-205ENST00000554545 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
CDK2-205ENST00000554545 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
CDK2-205ENST00000554545 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
CDK2-205ENST00000554545 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
CDK2-205ENST00000554545 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
CDK2-205ENST00000554545 FBLN2P98095 1184 aa22.12■■□□□ 1.13
CDK2-205ENST00000554545 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
CDK2-205ENST00000554545 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
CDK2-205ENST00000554545 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
CDK2-205ENST00000554545 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
CDK2-205ENST00000554545 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
CDK2-205ENST00000554545 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
CDK2-205ENST00000554545 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
CDK2-205ENST00000554545 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
CDK2-205ENST00000554545 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
CDK2-205ENST00000554545 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
CDK2-205ENST00000554545 NUP160Q12769 1436 aa21.85■■□□□ 1.09
CDK2-205ENST00000554545 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
CDK2-205ENST00000554545 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
CDK2-205ENST00000554545 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
CDK2-205ENST00000554545 CUL7Q14999 1698 aa21.82■■□□□ 1.08
CDK2-205ENST00000554545 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
CDK2-205ENST00000554545 IGF1RP08069 1367 aa21.73■■□□□ 1.07
CDK2-205ENST00000554545 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
CDK2-205ENST00000554545 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
CDK2-205ENST00000554545 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms