RNA–Protein interactions for RNA: ENST00000554520.1

ESR2-207, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best)

Gene ESR2, Length 1,215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-207ENST00000554520 NISCHQ9Y2I1 1504 aa44.68■■■■■ 4.74
ESR2-207ENST00000554520 CCDC180Q9P1Z9 1646 aa40.09■■■■■ 4.01
ESR2-207ENST00000554520 ABCC9O60706 1549 aa39.83■■■■□ 3.97
ESR2-207ENST00000554520 RB1CC1Q8TDY2 1594 aa38.04■■■■□ 3.68
ESR2-207ENST00000554520 NACADO15069 1562 aa37.81■■■■□ 3.64
ESR2-207ENST00000554520 DCAF8L2P0C7V8 631 aa37.58■■■■□ 3.61
ESR2-207ENST00000554520 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
ESR2-207ENST00000554520 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
ESR2-207ENST00000554520 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
ESR2-207ENST00000554520 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.53
ESR2-207ENST00000554520 PABPN1Q86U42 306 aaKnown RBP eCLIP37.07■■■■□ 3.52
ESR2-207ENST00000554520 DCAF1Q9Y4B6 1507 aa36.94■■■■□ 3.5
ESR2-207ENST00000554520 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
ESR2-207ENST00000554520 SCRIBQ14160 1630 aa36.49■■■■□ 3.43
ESR2-207ENST00000554520 SHROOM4Q9ULL8 1493 aa36.45■■■■□ 3.43
ESR2-207ENST00000554520 CC2D2AQ9P2K1 1620 aa36.02■■■■□ 3.36
ESR2-207ENST00000554520 EIF4G1Q04637 1599 aaKnown RBP35.99■■■■□ 3.35
ESR2-207ENST00000554520 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
ESR2-207ENST00000554520 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
ESR2-207ENST00000554520 SMARCA4P51532 1647 aa34.84■■■■□ 3.17
ESR2-207ENST00000554520 ATAD2BQ9ULI0 1458 aa34.79■■■■□ 3.16
ESR2-207ENST00000554520 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
ESR2-207ENST00000554520 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
ESR2-207ENST00000554520 HMGXB3Q12766 1538 aa34.66■■■■□ 3.14
ESR2-207ENST00000554520 PEG3Q9GZU2 1588 aa34.5■■■■□ 3.11
ESR2-207ENST00000554520 BAZ1BQ9UIG0 1483 aaKnown RBP34.48■■■■□ 3.11
ESR2-207ENST00000554520 MROH2BQ7Z745 1585 aa34.42■■■■□ 3.1
ESR2-207ENST00000554520 ERCC6Q03468 1493 aa34.39■■■■□ 3.1
ESR2-207ENST00000554520 CUX2O14529 1486 aa34.27■■■■□ 3.08
ESR2-207ENST00000554520 NESP48681 1621 aa34.26■■■■□ 3.08
ESR2-207ENST00000554520 LAMC3Q9Y6N6 1575 aa34.11■■■■□ 3.05
ESR2-207ENST00000554520 WIZO95785 1651 aa34.05■■■■□ 3.04
ESR2-207ENST00000554520 DNAJC5Q9H3Z4 198 aa34.01■■■■□ 3.03
ESR2-207ENST00000554520 THOC2Q8NI27 1593 aaKnown RBP33.93■■■■□ 3.02
ESR2-207ENST00000554520 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
ESR2-207ENST00000554520 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
ESR2-207ENST00000554520 CADPSQ9ULU8 1353 aa33.81■■■■□ 3
ESR2-207ENST00000554520 RSF1Q96T23 1441 aaPredicted RBP33.75■■■□□ 2.99
ESR2-207ENST00000554520 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
ESR2-207ENST00000554520 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.97
ESR2-207ENST00000554520 WDR62O43379 1518 aa33.49■■■□□ 2.95
ESR2-207ENST00000554520 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
ESR2-207ENST00000554520 CFTRP13569 1480 aa33.48■■■□□ 2.95
ESR2-207ENST00000554520 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
ESR2-207ENST00000554520 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
ESR2-207ENST00000554520 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
ESR2-207ENST00000554520 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
ESR2-207ENST00000554520 TOPBP1Q92547 1522 aa32.84■■■□□ 2.85
ESR2-207ENST00000554520 ABCC8Q09428 1581 aa32.8■■■□□ 2.84
ESR2-207ENST00000554520 IFT140Q96RY7 1462 aa32.8■■■□□ 2.84
ESR2-207ENST00000554520 DNMBPQ6XZF7 1577 aa32.76■■■□□ 2.84
ESR2-207ENST00000554520 OSCARQ8IYS5 282 aa32.71■■■□□ 2.83
ESR2-207ENST00000554520 ZNF608Q9ULD9 1512 aaPredicted RBP32.71■■■□□ 2.83
ESR2-207ENST00000554520 EIF4G3O43432 1585 aaKnown RBP32.59■■■□□ 2.81
ESR2-207ENST00000554520 TRIM41Q8WV44 630 aa32.59■■■□□ 2.81
ESR2-207ENST00000554520 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
ESR2-207ENST00000554520 POLA1P09884 1462 aaPredicted RBP32.51■■■□□ 2.79
ESR2-207ENST00000554520 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.78
ESR2-207ENST00000554520 SUPT5HO00267 1087 aaKnown RBP32.38■■■□□ 2.77
ESR2-207ENST00000554520 RAD54L2Q9Y4B4 1467 aa32.36■■■□□ 2.77
ESR2-207ENST00000554520 CHD1O14646 1710 aa32.35■■■□□ 2.77
ESR2-207ENST00000554520 SOGA1O94964 1423 aa32.34■■■□□ 2.77
ESR2-207ENST00000554520 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
ESR2-207ENST00000554520 CUX1P39880 1505 aa32.33■■■□□ 2.77
ESR2-207ENST00000554520 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
ESR2-207ENST00000554520 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
ESR2-207ENST00000554520 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
ESR2-207ENST00000554520 WDR97A6NE52 1622 aa32.26■■■□□ 2.76
ESR2-207ENST00000554520 TDRD9Q8NDG6 1382 aaKnown RBP32.25■■■□□ 2.75
ESR2-207ENST00000554520 ARHGEF11O15085 1522 aa32.21■■■□□ 2.75
ESR2-207ENST00000554520 FBLN2P98095 1184 aa32.17■■■□□ 2.74
ESR2-207ENST00000554520 SNAPC4Q5SXM2 1469 aa32.12■■■□□ 2.73
ESR2-207ENST00000554520 GRIN2BQ13224 1484 aa32.07■■■□□ 2.72
ESR2-207ENST00000554520 MAGI1Q96QZ7 1491 aaPredicted RBP32.06■■■□□ 2.72
ESR2-207ENST00000554520 PBRM1Q86U86 1689 aa32.02■■■□□ 2.72
ESR2-207ENST00000554520 ABCA10Q8WWZ4 1543 aa31.99■■■□□ 2.71
ESR2-207ENST00000554520 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
ESR2-207ENST00000554520 CHMP7Q8WUX9 453 aaPredicted RBP31.97■■■□□ 2.71
ESR2-207ENST00000554520 SYNJ1O43426 1573 aa31.95■■■□□ 2.71
ESR2-207ENST00000554520 ABCA5Q8WWZ7 1642 aa31.95■■■□□ 2.71
ESR2-207ENST00000554520 SYNJ2O15056 1496 aa31.95■■■□□ 2.7
ESR2-207ENST00000554520 CLASP1Q7Z460 1538 aa31.93■■■□□ 2.7
ESR2-207ENST00000554520 CYB5RLQ6IPT4 315 aa31.92■■■□□ 2.7
ESR2-207ENST00000554520 BIVM-ERCC5R4GMW8 1640 aa31.92■■■□□ 2.7
ESR2-207ENST00000554520 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
ESR2-207ENST00000554520 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
ESR2-207ENST00000554520 WRNQ14191 1432 aaPredicted RBP eCLIP31.87■■■□□ 2.69
ESR2-207ENST00000554520 ADAMTS12P58397 1594 aa31.68■■■□□ 2.66
ESR2-207ENST00000554520 GRIN2AQ12879 1464 aa31.65■■■□□ 2.66
ESR2-207ENST00000554520 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
ESR2-207ENST00000554520 FHAD1B1AJZ9 1412 aa31.58■■■□□ 2.65
ESR2-207ENST00000554520 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
ESR2-207ENST00000554520 NUP160Q12769 1436 aa31.54■■■□□ 2.64
ESR2-207ENST00000554520 TRHP20396 242 aaPredicted RBP31.52■■■□□ 2.64
ESR2-207ENST00000554520 ERCC6L2Q5T890 1561 aa31.43■■■□□ 2.62
ESR2-207ENST00000554520 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
ESR2-207ENST00000554520 KIF27Q86VH2 1401 aa31.24■■■□□ 2.59
ESR2-207ENST00000554520 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
ESR2-207ENST00000554520 CUL7Q14999 1698 aa31.21■■■□□ 2.59
ESR2-207ENST00000554520 PRG4Q92954 1404 aaPredicted RBP31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms