RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 NISCHQ9Y2I1 1504 aa42.76■■■■■ 4.44
PPP4R3A-203ENST00000554511 ABCC9O60706 1549 aa38.21■■■■□ 3.71
PPP4R3A-203ENST00000554511 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.7
PPP4R3A-203ENST00000554511 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
PPP4R3A-203ENST00000554511 NACADO15069 1562 aa36.13■■■■□ 3.37
PPP4R3A-203ENST00000554511 DCAF8L2P0C7V8 631 aa36.08■■■■□ 3.37
PPP4R3A-203ENST00000554511 DNAJC5BQ9UF47 199 aa35.81■■■■□ 3.32
PPP4R3A-203ENST00000554511 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
PPP4R3A-203ENST00000554511 MYO15BQ96JP2 1530 aa35.65■■■■□ 3.3
PPP4R3A-203ENST00000554511 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
PPP4R3A-203ENST00000554511 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
PPP4R3A-203ENST00000554511 DCAF1Q9Y4B6 1507 aa35.43■■■■□ 3.26
PPP4R3A-203ENST00000554511 BICRAQ9NZM4 1560 aa35.3■■■■□ 3.24
PPP4R3A-203ENST00000554511 SCRIBQ14160 1630 aa34.85■■■■□ 3.17
PPP4R3A-203ENST00000554511 SHROOM4Q9ULL8 1493 aa34.81■■■■□ 3.16
PPP4R3A-203ENST00000554511 CC2D2AQ9P2K1 1620 aa34.48■■■■□ 3.11
PPP4R3A-203ENST00000554511 EIF4G1Q04637 1599 aaKnown RBP34.44■■■■□ 3.1
PPP4R3A-203ENST00000554511 CECR2Q9BXF3 1484 aa34.4■■■■□ 3.1
PPP4R3A-203ENST00000554511 NCAPD3P42695 1498 aa33.38■■■□□ 2.93
PPP4R3A-203ENST00000554511 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
PPP4R3A-203ENST00000554511 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
PPP4R3A-203ENST00000554511 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
PPP4R3A-203ENST00000554511 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
PPP4R3A-203ENST00000554511 HMGXB3Q12766 1538 aa33.1■■■□□ 2.89
PPP4R3A-203ENST00000554511 ERCC6Q03468 1493 aa32.98■■■□□ 2.87
PPP4R3A-203ENST00000554511 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
PPP4R3A-203ENST00000554511 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
PPP4R3A-203ENST00000554511 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
PPP4R3A-203ENST00000554511 CUX2O14529 1486 aa32.86■■■□□ 2.85
PPP4R3A-203ENST00000554511 NESP48681 1621 aa32.84■■■□□ 2.85
PPP4R3A-203ENST00000554511 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
PPP4R3A-203ENST00000554511 DNAJC5Q9H3Z4 198 aa32.81■■■□□ 2.84
PPP4R3A-203ENST00000554511 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
PPP4R3A-203ENST00000554511 WIZO95785 1651 aa32.57■■■□□ 2.8
PPP4R3A-203ENST00000554511 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
PPP4R3A-203ENST00000554511 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.78
PPP4R3A-203ENST00000554511 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
PPP4R3A-203ENST00000554511 CADPSQ9ULU8 1353 aa32.39■■■□□ 2.78
PPP4R3A-203ENST00000554511 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
PPP4R3A-203ENST00000554511 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
PPP4R3A-203ENST00000554511 MRC2Q9UBG0 1479 aa32.13■■■□□ 2.73
PPP4R3A-203ENST00000554511 WDR62O43379 1518 aa32.04■■■□□ 2.72
PPP4R3A-203ENST00000554511 CFTRP13569 1480 aa32.02■■■□□ 2.72
PPP4R3A-203ENST00000554511 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
PPP4R3A-203ENST00000554511 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
PPP4R3A-203ENST00000554511 CCDC88BA6NC98 1476 aa31.96■■■□□ 2.71
PPP4R3A-203ENST00000554511 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
PPP4R3A-203ENST00000554511 PRDM2Q13029 1718 aa31.61■■■□□ 2.65
PPP4R3A-203ENST00000554511 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
PPP4R3A-203ENST00000554511 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
PPP4R3A-203ENST00000554511 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
PPP4R3A-203ENST00000554511 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
PPP4R3A-203ENST00000554511 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
PPP4R3A-203ENST00000554511 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
PPP4R3A-203ENST00000554511 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
PPP4R3A-203ENST00000554511 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
PPP4R3A-203ENST00000554511 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
PPP4R3A-203ENST00000554511 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.571e-14■■■■□ 21.8
PPP4R3A-203ENST00000554511 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
PPP4R3A-203ENST00000554511 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
PPP4R3A-203ENST00000554511 SOGA1O94964 1423 aa30.98■■■□□ 2.55
PPP4R3A-203ENST00000554511 WRNQ14191 1432 aaPredicted RBP eCLIP30.97■■■□□ 2.55
PPP4R3A-203ENST00000554511 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.55
PPP4R3A-203ENST00000554511 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.55
PPP4R3A-203ENST00000554511 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.55
PPP4R3A-203ENST00000554511 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
PPP4R3A-203ENST00000554511 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
PPP4R3A-203ENST00000554511 FBLN2P98095 1184 aa30.9■■■□□ 2.54
PPP4R3A-203ENST00000554511 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
PPP4R3A-203ENST00000554511 CUX1P39880 1505 aa30.88■■■□□ 2.53
PPP4R3A-203ENST00000554511 CHD1O14646 1710 aa30.87■■■□□ 2.53
PPP4R3A-203ENST00000554511 TOP2BQ02880 1626 aa30.77■■■□□ 2.52
PPP4R3A-203ENST00000554511 WDR97A6NE52 1622 aa30.76■■■□□ 2.51
PPP4R3A-203ENST00000554511 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
PPP4R3A-203ENST00000554511 SYNJ1O43426 1573 aa30.74■■■□□ 2.51
PPP4R3A-203ENST00000554511 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
PPP4R3A-203ENST00000554511 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
PPP4R3A-203ENST00000554511 CYB5RLQ6IPT4 315 aa30.71■■■□□ 2.51
PPP4R3A-203ENST00000554511 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
PPP4R3A-203ENST00000554511 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
PPP4R3A-203ENST00000554511 MAGI1Q96QZ7 1491 aaPredicted RBP30.65■■■□□ 2.5
PPP4R3A-203ENST00000554511 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
PPP4R3A-203ENST00000554511 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
PPP4R3A-203ENST00000554511 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
PPP4R3A-203ENST00000554511 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
PPP4R3A-203ENST00000554511 CLASP1Q7Z460 1538 aa30.54■■■□□ 2.48
PPP4R3A-203ENST00000554511 PBRM1Q86U86 1689 aa30.5■■■□□ 2.47
PPP4R3A-203ENST00000554511 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
PPP4R3A-203ENST00000554511 TRHP20396 242 aaPredicted RBP30.36■■■□□ 2.45
PPP4R3A-203ENST00000554511 KIF27Q86VH2 1401 aa30.32■■■□□ 2.44
PPP4R3A-203ENST00000554511 GRIN2AQ12879 1464 aa30.28■■■□□ 2.44
PPP4R3A-203ENST00000554511 ADAMTS12P58397 1594 aa30.24■■■□□ 2.43
PPP4R3A-203ENST00000554511 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
PPP4R3A-203ENST00000554511 EEA1Q15075 1411 aa30.19■■■□□ 2.42
PPP4R3A-203ENST00000554511 NUP160Q12769 1436 aa30.17■■■□□ 2.42
PPP4R3A-203ENST00000554511 ERICH3Q5RHP9 1530 aa30.16■■■□□ 2.42
PPP4R3A-203ENST00000554511 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
PPP4R3A-203ENST00000554511 ERCC6L2Q5T890 1561 aa30.09■■■□□ 2.41
PPP4R3A-203ENST00000554511 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
PPP4R3A-203ENST00000554511 IGF1RP08069 1367 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms