RNA–Protein interactions for RNA: ENST00000554497.1

TMEM30B-201, Transcript of transmembrane protein 30B, humanhuman

TSL 4

Gene TMEM30B, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-201ENST00000554497 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
TMEM30B-201ENST00000554497 ABCC9O60706 1549 aa29.79■■■□□ 2.36
TMEM30B-201ENST00000554497 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
TMEM30B-201ENST00000554497 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
TMEM30B-201ENST00000554497 RB1CC1Q8TDY2 1594 aa27.97■■■□□ 2.07
TMEM30B-201ENST00000554497 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
TMEM30B-201ENST00000554497 NACADO15069 1562 aa27.58■■■□□ 2.01
TMEM30B-201ENST00000554497 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
TMEM30B-201ENST00000554497 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
TMEM30B-201ENST00000554497 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
TMEM30B-201ENST00000554497 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
TMEM30B-201ENST00000554497 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
TMEM30B-201ENST00000554497 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
TMEM30B-201ENST00000554497 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
TMEM30B-201ENST00000554497 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
TMEM30B-201ENST00000554497 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
TMEM30B-201ENST00000554497 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
TMEM30B-201ENST00000554497 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
TMEM30B-201ENST00000554497 DCAF1Q9Y4B6 1507 aa26.3■■□□□ 1.8
TMEM30B-201ENST00000554497 CUX2O14529 1486 aa25.97■■□□□ 1.75
TMEM30B-201ENST00000554497 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
TMEM30B-201ENST00000554497 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
TMEM30B-201ENST00000554497 NESP48681 1621 aa25.38■■□□□ 1.65
TMEM30B-201ENST00000554497 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
TMEM30B-201ENST00000554497 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
TMEM30B-201ENST00000554497 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
TMEM30B-201ENST00000554497 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
TMEM30B-201ENST00000554497 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
TMEM30B-201ENST00000554497 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
TMEM30B-201ENST00000554497 LAMC3Q9Y6N6 1575 aa25.03■■□□□ 1.6
TMEM30B-201ENST00000554497 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
TMEM30B-201ENST00000554497 BAZ1BQ9UIG0 1483 aaKnown RBP25.01■■□□□ 1.59
TMEM30B-201ENST00000554497 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
TMEM30B-201ENST00000554497 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
TMEM30B-201ENST00000554497 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
TMEM30B-201ENST00000554497 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
TMEM30B-201ENST00000554497 WDR62O43379 1518 aa24.74■■□□□ 1.55
TMEM30B-201ENST00000554497 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
TMEM30B-201ENST00000554497 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
TMEM30B-201ENST00000554497 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TMEM30B-201ENST00000554497 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
TMEM30B-201ENST00000554497 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
TMEM30B-201ENST00000554497 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
TMEM30B-201ENST00000554497 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
TMEM30B-201ENST00000554497 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
TMEM30B-201ENST00000554497 WIZO95785 1651 aa24.29■■□□□ 1.48
TMEM30B-201ENST00000554497 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
TMEM30B-201ENST00000554497 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
TMEM30B-201ENST00000554497 CFTRP13569 1480 aa24.23■■□□□ 1.47
TMEM30B-201ENST00000554497 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
TMEM30B-201ENST00000554497 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
TMEM30B-201ENST00000554497 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
TMEM30B-201ENST00000554497 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
TMEM30B-201ENST00000554497 ARAP1Q96P48 1450 aa24■■□□□ 1.43
TMEM30B-201ENST00000554497 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
TMEM30B-201ENST00000554497 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
TMEM30B-201ENST00000554497 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
TMEM30B-201ENST00000554497 CHD1O14646 1710 aa23.92■■□□□ 1.42
TMEM30B-201ENST00000554497 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
TMEM30B-201ENST00000554497 TOPBP1Q92547 1522 aa23.86■■□□□ 1.41
TMEM30B-201ENST00000554497 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
TMEM30B-201ENST00000554497 AQRO60306 1485 aaKnown RBP eCLIP23.77■■□□□ 1.4
TMEM30B-201ENST00000554497 FBLN2P98095 1184 aa23.74■■□□□ 1.39
TMEM30B-201ENST00000554497 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
TMEM30B-201ENST00000554497 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
TMEM30B-201ENST00000554497 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
TMEM30B-201ENST00000554497 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
TMEM30B-201ENST00000554497 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
TMEM30B-201ENST00000554497 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
TMEM30B-201ENST00000554497 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
TMEM30B-201ENST00000554497 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
TMEM30B-201ENST00000554497 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
TMEM30B-201ENST00000554497 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
TMEM30B-201ENST00000554497 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
TMEM30B-201ENST00000554497 SOGA1O94964 1423 aa23.42■■□□□ 1.34
TMEM30B-201ENST00000554497 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
TMEM30B-201ENST00000554497 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
TMEM30B-201ENST00000554497 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
TMEM30B-201ENST00000554497 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
TMEM30B-201ENST00000554497 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
TMEM30B-201ENST00000554497 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
TMEM30B-201ENST00000554497 ERCC6L2Q5T890 1561 aa23.22■■□□□ 1.31
TMEM30B-201ENST00000554497 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
TMEM30B-201ENST00000554497 CUX1P39880 1505 aa23.18■■□□□ 1.3
TMEM30B-201ENST00000554497 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
TMEM30B-201ENST00000554497 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
TMEM30B-201ENST00000554497 ILDR1Q86SU0 546 aaPredicted RBP23.07■■□□□ 1.28
TMEM30B-201ENST00000554497 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
TMEM30B-201ENST00000554497 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
TMEM30B-201ENST00000554497 NUP160Q12769 1436 aa22.99■■□□□ 1.27
TMEM30B-201ENST00000554497 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
TMEM30B-201ENST00000554497 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
TMEM30B-201ENST00000554497 KDM4FA0A1W2PPD8 638 aa22.95■■□□□ 1.26
TMEM30B-201ENST00000554497 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
TMEM30B-201ENST00000554497 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
TMEM30B-201ENST00000554497 FAM69CQ0P6D2 419 aa22.88■■□□□ 1.25
TMEM30B-201ENST00000554497 KDM6BO15054 1643 aa22.82■■□□□ 1.24
TMEM30B-201ENST00000554497 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
TMEM30B-201ENST00000554497 DIP2BQ9P265 1576 aa22.81■■□□□ 1.24
TMEM30B-201ENST00000554497 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms