RNA–Protein interactions for RNA: ENST00000554420.1

TSSK4-205, Transcript of testis specific serine kinase 4, humanhuman

TSL 2

Gene TSSK4, Length 1,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSK4-205ENST00000554420 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
TSSK4-205ENST00000554420 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
TSSK4-205ENST00000554420 ABCC9O60706 1549 aa30.24■■■□□ 2.43
TSSK4-205ENST00000554420 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
TSSK4-205ENST00000554420 NACADO15069 1562 aa28.93■■■□□ 2.22
TSSK4-205ENST00000554420 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
TSSK4-205ENST00000554420 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
TSSK4-205ENST00000554420 MYO15BQ96JP2 1530 aa28.75■■■□□ 2.19
TSSK4-205ENST00000554420 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
TSSK4-205ENST00000554420 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
TSSK4-205ENST00000554420 PABPN1Q86U42 306 aaKnown RBP eCLIP28.27■■■□□ 2.12
TSSK4-205ENST00000554420 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
TSSK4-205ENST00000554420 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
TSSK4-205ENST00000554420 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
TSSK4-205ENST00000554420 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
TSSK4-205ENST00000554420 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
TSSK4-205ENST00000554420 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
TSSK4-205ENST00000554420 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
TSSK4-205ENST00000554420 SMARCA4P51532 1647 aa26.88■■□□□ 1.89
TSSK4-205ENST00000554420 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
TSSK4-205ENST00000554420 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
TSSK4-205ENST00000554420 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
TSSK4-205ENST00000554420 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
TSSK4-205ENST00000554420 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
TSSK4-205ENST00000554420 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
TSSK4-205ENST00000554420 HMGXB3Q12766 1538 aa26.58■■□□□ 1.84
TSSK4-205ENST00000554420 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
TSSK4-205ENST00000554420 WIZO95785 1651 aa26.42■■□□□ 1.82
TSSK4-205ENST00000554420 RSF1Q96T23 1441 aaPredicted RBP26.41■■□□□ 1.82
TSSK4-205ENST00000554420 NESP48681 1621 aa26.19■■□□□ 1.78
TSSK4-205ENST00000554420 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
TSSK4-205ENST00000554420 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
TSSK4-205ENST00000554420 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
TSSK4-205ENST00000554420 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
TSSK4-205ENST00000554420 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
TSSK4-205ENST00000554420 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
TSSK4-205ENST00000554420 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
TSSK4-205ENST00000554420 CFTRP13569 1480 aa25.81■■□□□ 1.72
TSSK4-205ENST00000554420 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
TSSK4-205ENST00000554420 CUX2O14529 1486 aa25.74■■□□□ 1.71
TSSK4-205ENST00000554420 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
TSSK4-205ENST00000554420 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.69
TSSK4-205ENST00000554420 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
TSSK4-205ENST00000554420 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
TSSK4-205ENST00000554420 WDR62O43379 1518 aa25.53■■□□□ 1.68
TSSK4-205ENST00000554420 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
TSSK4-205ENST00000554420 URB2Q14146 1524 aaKnown RBP25.46■■□□□ 1.67
TSSK4-205ENST00000554420 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
TSSK4-205ENST00000554420 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
TSSK4-205ENST00000554420 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
TSSK4-205ENST00000554420 DNAJC5Q9H3Z4 198 aa25.09■■□□□ 1.61
TSSK4-205ENST00000554420 CUX1P39880 1505 aa25.07■■□□□ 1.6
TSSK4-205ENST00000554420 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
TSSK4-205ENST00000554420 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
TSSK4-205ENST00000554420 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
TSSK4-205ENST00000554420 TARBP1Q13395 1621 aaKnown RBP25■■□□□ 1.59
TSSK4-205ENST00000554420 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
TSSK4-205ENST00000554420 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
TSSK4-205ENST00000554420 SOGA1O94964 1423 aa24.91■■□□□ 1.58
TSSK4-205ENST00000554420 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
TSSK4-205ENST00000554420 AQRO60306 1485 aaKnown RBP eCLIP24.88■■□□□ 1.57
TSSK4-205ENST00000554420 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
TSSK4-205ENST00000554420 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
TSSK4-205ENST00000554420 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
TSSK4-205ENST00000554420 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
TSSK4-205ENST00000554420 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
TSSK4-205ENST00000554420 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
TSSK4-205ENST00000554420 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
TSSK4-205ENST00000554420 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
TSSK4-205ENST00000554420 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
TSSK4-205ENST00000554420 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
TSSK4-205ENST00000554420 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
TSSK4-205ENST00000554420 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
TSSK4-205ENST00000554420 CHD1O14646 1710 aa24.57■■□□□ 1.52
TSSK4-205ENST00000554420 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
TSSK4-205ENST00000554420 MAGI1Q96QZ7 1491 aaPredicted RBP24.54■■□□□ 1.52
TSSK4-205ENST00000554420 FBLN2P98095 1184 aa24.52■■□□□ 1.52
TSSK4-205ENST00000554420 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
TSSK4-205ENST00000554420 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
TSSK4-205ENST00000554420 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
TSSK4-205ENST00000554420 ADAMTS12P58397 1594 aa24.38■■□□□ 1.49
TSSK4-205ENST00000554420 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
TSSK4-205ENST00000554420 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.48
TSSK4-205ENST00000554420 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
TSSK4-205ENST00000554420 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
TSSK4-205ENST00000554420 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
TSSK4-205ENST00000554420 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
TSSK4-205ENST00000554420 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
TSSK4-205ENST00000554420 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
TSSK4-205ENST00000554420 IGF1RP08069 1367 aa24.28■■□□□ 1.48
TSSK4-205ENST00000554420 NUP160Q12769 1436 aa24.23■■□□□ 1.47
TSSK4-205ENST00000554420 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
TSSK4-205ENST00000554420 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
TSSK4-205ENST00000554420 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
TSSK4-205ENST00000554420 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
TSSK4-205ENST00000554420 CUL7Q14999 1698 aa24.1■■□□□ 1.45
TSSK4-205ENST00000554420 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
TSSK4-205ENST00000554420 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
TSSK4-205ENST00000554420 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
TSSK4-205ENST00000554420 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms