RNA–Protein interactions for RNA: ENST00000554352.1

PAX8-212, Transcript of paired box 8, humanhuman

TSL 3

Gene PAX8, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-212ENST00000554352 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
PAX8-212ENST00000554352 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
PAX8-212ENST00000554352 ABCC9O60706 1549 aa26.95■■□□□ 1.9
PAX8-212ENST00000554352 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
PAX8-212ENST00000554352 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
PAX8-212ENST00000554352 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
PAX8-212ENST00000554352 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
PAX8-212ENST00000554352 NACADO15069 1562 aa26.34■■□□□ 1.81
PAX8-212ENST00000554352 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
PAX8-212ENST00000554352 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
PAX8-212ENST00000554352 UNC13AQ9UPW8 1703 aa25.58■■□□□ 1.69
PAX8-212ENST00000554352 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
PAX8-212ENST00000554352 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
PAX8-212ENST00000554352 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
PAX8-212ENST00000554352 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
PAX8-212ENST00000554352 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
PAX8-212ENST00000554352 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
PAX8-212ENST00000554352 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
PAX8-212ENST00000554352 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
PAX8-212ENST00000554352 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
PAX8-212ENST00000554352 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
PAX8-212ENST00000554352 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
PAX8-212ENST00000554352 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
PAX8-212ENST00000554352 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
PAX8-212ENST00000554352 WIZO95785 1651 aa24.36■■□□□ 1.49
PAX8-212ENST00000554352 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
PAX8-212ENST00000554352 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
PAX8-212ENST00000554352 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
PAX8-212ENST00000554352 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
PAX8-212ENST00000554352 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
PAX8-212ENST00000554352 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
PAX8-212ENST00000554352 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
PAX8-212ENST00000554352 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
PAX8-212ENST00000554352 CFTRP13569 1480 aa23.58■■□□□ 1.37
PAX8-212ENST00000554352 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
PAX8-212ENST00000554352 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
PAX8-212ENST00000554352 NESP48681 1621 aa23.47■■□□□ 1.35
PAX8-212ENST00000554352 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
PAX8-212ENST00000554352 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
PAX8-212ENST00000554352 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
PAX8-212ENST00000554352 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
PAX8-212ENST00000554352 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
PAX8-212ENST00000554352 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
PAX8-212ENST00000554352 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.29
PAX8-212ENST00000554352 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
PAX8-212ENST00000554352 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
PAX8-212ENST00000554352 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
PAX8-212ENST00000554352 CUX1P39880 1505 aa23.04■■□□□ 1.28
PAX8-212ENST00000554352 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
PAX8-212ENST00000554352 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
PAX8-212ENST00000554352 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
PAX8-212ENST00000554352 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
PAX8-212ENST00000554352 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
PAX8-212ENST00000554352 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
PAX8-212ENST00000554352 WDR62O43379 1518 aa23■■□□□ 1.27
PAX8-212ENST00000554352 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
PAX8-212ENST00000554352 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
PAX8-212ENST00000554352 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
PAX8-212ENST00000554352 SOGA1O94964 1423 aa22.78■■□□□ 1.24
PAX8-212ENST00000554352 CUX2O14529 1486 aa22.78■■□□□ 1.24
PAX8-212ENST00000554352 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
PAX8-212ENST00000554352 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
PAX8-212ENST00000554352 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
PAX8-212ENST00000554352 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
PAX8-212ENST00000554352 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
PAX8-212ENST00000554352 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
PAX8-212ENST00000554352 EEA1Q15075 1411 aa22.61■■□□□ 1.21
PAX8-212ENST00000554352 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
PAX8-212ENST00000554352 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
PAX8-212ENST00000554352 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
PAX8-212ENST00000554352 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
PAX8-212ENST00000554352 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
PAX8-212ENST00000554352 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.19
PAX8-212ENST00000554352 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
PAX8-212ENST00000554352 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
PAX8-212ENST00000554352 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
PAX8-212ENST00000554352 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
PAX8-212ENST00000554352 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
PAX8-212ENST00000554352 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
PAX8-212ENST00000554352 IGF1RP08069 1367 aa22.42■■□□□ 1.18
PAX8-212ENST00000554352 CUL7Q14999 1698 aa22.39■■□□□ 1.17
PAX8-212ENST00000554352 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
PAX8-212ENST00000554352 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
PAX8-212ENST00000554352 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
PAX8-212ENST00000554352 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
PAX8-212ENST00000554352 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
PAX8-212ENST00000554352 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
PAX8-212ENST00000554352 KIF21BO75037 1637 aa22.3■■□□□ 1.16
PAX8-212ENST00000554352 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
PAX8-212ENST00000554352 SYNJ2O15056 1496 aa22.25■■□□□ 1.15
PAX8-212ENST00000554352 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
PAX8-212ENST00000554352 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
PAX8-212ENST00000554352 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
PAX8-212ENST00000554352 FBLN2P98095 1184 aa22.14■■□□□ 1.13
PAX8-212ENST00000554352 CHD1O14646 1710 aa22.11■■□□□ 1.13
PAX8-212ENST00000554352 EHMT2Q96KQ7 1210 aa22.1■■□□□ 1.13
PAX8-212ENST00000554352 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
PAX8-212ENST00000554352 LOC105371045A0A1W2PR82 267 aa22.08■■□□□ 1.13
PAX8-212ENST00000554352 NUP160Q12769 1436 aa22.04■■□□□ 1.12
PAX8-212ENST00000554352 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms