RNA–Protein interactions for RNA: ENST00000554343.1

LCN9-203, Transcript of lipocalin 9, humanhuman

TSL 3

Gene LCN9, Length 798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN9-203ENST00000554343 NISCHQ9Y2I1 1504 aa39.84■■■■□ 3.97
LCN9-203ENST00000554343 CCDC180Q9P1Z9 1646 aa35.39■■■■□ 3.26
LCN9-203ENST00000554343 ABCC9O60706 1549 aa34.51■■■■□ 3.12
LCN9-203ENST00000554343 NACADO15069 1562 aa33.3■■■□□ 2.92
LCN9-203ENST00000554343 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
LCN9-203ENST00000554343 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
LCN9-203ENST00000554343 ZCCHC6Q5VYS8 1495 aaKnown RBP33.18■■■□□ 2.9
LCN9-203ENST00000554343 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
LCN9-203ENST00000554343 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
LCN9-203ENST00000554343 UNC13AQ9UPW8 1703 aa32.46■■■□□ 2.79
LCN9-203ENST00000554343 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
LCN9-203ENST00000554343 BICRAQ9NZM4 1560 aa32.25■■■□□ 2.75
LCN9-203ENST00000554343 SCRIBQ14160 1630 aa32.21■■■□□ 2.75
LCN9-203ENST00000554343 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
LCN9-203ENST00000554343 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
LCN9-203ENST00000554343 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
LCN9-203ENST00000554343 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
LCN9-203ENST00000554343 CECR2Q9BXF3 1484 aa31.04■■■□□ 2.56
LCN9-203ENST00000554343 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
LCN9-203ENST00000554343 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
LCN9-203ENST00000554343 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
LCN9-203ENST00000554343 ATAD2BQ9ULI0 1458 aa30.72■■■□□ 2.51
LCN9-203ENST00000554343 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
LCN9-203ENST00000554343 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
LCN9-203ENST00000554343 PEG3Q9GZU2 1588 aa30.63■■■□□ 2.49
LCN9-203ENST00000554343 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
LCN9-203ENST00000554343 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
LCN9-203ENST00000554343 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
LCN9-203ENST00000554343 WIZO95785 1651 aa30.3■■■□□ 2.44
LCN9-203ENST00000554343 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
LCN9-203ENST00000554343 LAMC3Q9Y6N6 1575 aa29.89■■■□□ 2.38
LCN9-203ENST00000554343 NESP48681 1621 aa29.87■■■□□ 2.37
LCN9-203ENST00000554343 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
LCN9-203ENST00000554343 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
LCN9-203ENST00000554343 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
LCN9-203ENST00000554343 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
LCN9-203ENST00000554343 CFTRP13569 1480 aa29.66■■■□□ 2.34
LCN9-203ENST00000554343 SUPT5HO00267 1087 aaKnown RBP29.58■■■□□ 2.33
LCN9-203ENST00000554343 KIF21AQ7Z4S6 1674 aa29.51■■■□□ 2.31
LCN9-203ENST00000554343 CUX2O14529 1486 aa29.49■■■□□ 2.31
LCN9-203ENST00000554343 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.31
LCN9-203ENST00000554343 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
LCN9-203ENST00000554343 CEP164Q9UPV0 1460 aa29.4■■■□□ 2.3
LCN9-203ENST00000554343 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
LCN9-203ENST00000554343 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
LCN9-203ENST00000554343 WDR62O43379 1518 aa29.26■■■□□ 2.27
LCN9-203ENST00000554343 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.25
LCN9-203ENST00000554343 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
LCN9-203ENST00000554343 TOPBP1Q92547 1522 aa28.98■■■□□ 2.23
LCN9-203ENST00000554343 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
LCN9-203ENST00000554343 IFT140Q96RY7 1462 aa28.82■■■□□ 2.2
LCN9-203ENST00000554343 CUX1P39880 1505 aa28.76■■■□□ 2.19
LCN9-203ENST00000554343 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
LCN9-203ENST00000554343 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
LCN9-203ENST00000554343 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
LCN9-203ENST00000554343 SOGA1O94964 1423 aa28.64■■■□□ 2.18
LCN9-203ENST00000554343 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
LCN9-203ENST00000554343 ZNF608Q9ULD9 1512 aaPredicted RBP28.62■■■□□ 2.17
LCN9-203ENST00000554343 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
LCN9-203ENST00000554343 TOP2BQ02880 1626 aa28.56■■■□□ 2.16
LCN9-203ENST00000554343 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
LCN9-203ENST00000554343 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
LCN9-203ENST00000554343 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
LCN9-203ENST00000554343 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
LCN9-203ENST00000554343 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
LCN9-203ENST00000554343 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.15
LCN9-203ENST00000554343 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
LCN9-203ENST00000554343 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
LCN9-203ENST00000554343 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
LCN9-203ENST00000554343 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
LCN9-203ENST00000554343 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
LCN9-203ENST00000554343 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
LCN9-203ENST00000554343 MAGI1Q96QZ7 1491 aaPredicted RBP28.23■■■□□ 2.11
LCN9-203ENST00000554343 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
LCN9-203ENST00000554343 PBRM1Q86U86 1689 aa28.18■■■□□ 2.1
LCN9-203ENST00000554343 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
LCN9-203ENST00000554343 FBLN2P98095 1184 aa28.11■■■□□ 2.09
LCN9-203ENST00000554343 CHD1O14646 1710 aa28.11■■■□□ 2.09
LCN9-203ENST00000554343 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
LCN9-203ENST00000554343 ERICH3Q5RHP9 1530 aa28.09■■■□□ 2.09
LCN9-203ENST00000554343 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
LCN9-203ENST00000554343 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.07
LCN9-203ENST00000554343 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
LCN9-203ENST00000554343 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
LCN9-203ENST00000554343 IGF1RP08069 1367 aa27.94■■■□□ 2.06
LCN9-203ENST00000554343 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
LCN9-203ENST00000554343 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
LCN9-203ENST00000554343 CUL7Q14999 1698 aa27.83■■■□□ 2.05
LCN9-203ENST00000554343 NUP160Q12769 1436 aa27.82■■■□□ 2.04
LCN9-203ENST00000554343 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
LCN9-203ENST00000554343 CARMIL1Q5VZK9 1371 aa27.75■■■□□ 2.03
LCN9-203ENST00000554343 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
LCN9-203ENST00000554343 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
LCN9-203ENST00000554343 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
LCN9-203ENST00000554343 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
LCN9-203ENST00000554343 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
LCN9-203ENST00000554343 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
LCN9-203ENST00000554343 RAPGEF2Q9Y4G8 1499 aa27.6■■■□□ 2.01
LCN9-203ENST00000554343 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
LCN9-203ENST00000554343 EEA1Q15075 1411 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms