RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
RIPK3-202ENST00000554338 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
RIPK3-202ENST00000554338 ABCC9O60706 1549 aa30.68■■■□□ 2.5
RIPK3-202ENST00000554338 RB1CC1Q8TDY2 1594 aa29.23■■■□□ 2.27
RIPK3-202ENST00000554338 NACADO15069 1562 aa29.06■■■□□ 2.24
RIPK3-202ENST00000554338 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
RIPK3-202ENST00000554338 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
RIPK3-202ENST00000554338 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
RIPK3-202ENST00000554338 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
RIPK3-202ENST00000554338 ZCCHC6Q5VYS8 1495 aaKnown RBP28.55■■■□□ 2.16
RIPK3-202ENST00000554338 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
RIPK3-202ENST00000554338 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
RIPK3-202ENST00000554338 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
RIPK3-202ENST00000554338 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
RIPK3-202ENST00000554338 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
RIPK3-202ENST00000554338 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
RIPK3-202ENST00000554338 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
RIPK3-202ENST00000554338 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
RIPK3-202ENST00000554338 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
RIPK3-202ENST00000554338 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
RIPK3-202ENST00000554338 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
RIPK3-202ENST00000554338 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
RIPK3-202ENST00000554338 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
RIPK3-202ENST00000554338 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
RIPK3-202ENST00000554338 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
RIPK3-202ENST00000554338 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
RIPK3-202ENST00000554338 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
RIPK3-202ENST00000554338 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
RIPK3-202ENST00000554338 NESP48681 1621 aa26.4■■□□□ 1.82
RIPK3-202ENST00000554338 CUX2O14529 1486 aa26.38■■□□□ 1.81
RIPK3-202ENST00000554338 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
RIPK3-202ENST00000554338 DNAJC5Q9H3Z4 198 aa26.18■■□□□ 1.78
RIPK3-202ENST00000554338 WIZO95785 1651 aa26.18■■□□□ 1.78
RIPK3-202ENST00000554338 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
RIPK3-202ENST00000554338 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
RIPK3-202ENST00000554338 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
RIPK3-202ENST00000554338 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
RIPK3-202ENST00000554338 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
RIPK3-202ENST00000554338 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
RIPK3-202ENST00000554338 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
RIPK3-202ENST00000554338 WDR62O43379 1518 aa25.79■■□□□ 1.72
RIPK3-202ENST00000554338 CFTRP13569 1480 aa25.77■■□□□ 1.72
RIPK3-202ENST00000554338 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
RIPK3-202ENST00000554338 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
RIPK3-202ENST00000554338 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
RIPK3-202ENST00000554338 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
RIPK3-202ENST00000554338 PRDM2Q13029 1718 aa25.51■■□□□ 1.68
RIPK3-202ENST00000554338 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
RIPK3-202ENST00000554338 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
RIPK3-202ENST00000554338 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
RIPK3-202ENST00000554338 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
RIPK3-202ENST00000554338 ABCC8Q09428 1581 aa25.17■■□□□ 1.62
RIPK3-202ENST00000554338 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
RIPK3-202ENST00000554338 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
RIPK3-202ENST00000554338 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
RIPK3-202ENST00000554338 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
RIPK3-202ENST00000554338 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
RIPK3-202ENST00000554338 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.59
RIPK3-202ENST00000554338 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
RIPK3-202ENST00000554338 CUX1P39880 1505 aa24.91■■□□□ 1.58
RIPK3-202ENST00000554338 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
RIPK3-202ENST00000554338 RIMBP3CA6NJZ7 1639 aa24.87■■□□□ 1.57
RIPK3-202ENST00000554338 RIMBP3BA6NNM3 1639 aa24.87■■□□□ 1.57
RIPK3-202ENST00000554338 RIMBP3Q9UFD9 1639 aa24.87■■□□□ 1.57
RIPK3-202ENST00000554338 SOGA1O94964 1423 aa24.86■■□□□ 1.57
RIPK3-202ENST00000554338 CHD1O14646 1710 aa24.86■■□□□ 1.57
RIPK3-202ENST00000554338 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
RIPK3-202ENST00000554338 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
RIPK3-202ENST00000554338 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
RIPK3-202ENST00000554338 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
RIPK3-202ENST00000554338 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
RIPK3-202ENST00000554338 FBLN2P98095 1184 aa24.71■■□□□ 1.55
RIPK3-202ENST00000554338 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
RIPK3-202ENST00000554338 MAGI1Q96QZ7 1491 aaPredicted RBP24.66■■□□□ 1.54
RIPK3-202ENST00000554338 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
RIPK3-202ENST00000554338 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
RIPK3-202ENST00000554338 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
RIPK3-202ENST00000554338 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
RIPK3-202ENST00000554338 GAPVD1Q14C86 1478 aa24.59■■□□□ 1.53
RIPK3-202ENST00000554338 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
RIPK3-202ENST00000554338 SYNJ2O15056 1496 aa24.58■■□□□ 1.52
RIPK3-202ENST00000554338 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
RIPK3-202ENST00000554338 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
RIPK3-202ENST00000554338 CYB5RLQ6IPT4 315 aa24.54■■□□□ 1.52
RIPK3-202ENST00000554338 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
RIPK3-202ENST00000554338 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
RIPK3-202ENST00000554338 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
RIPK3-202ENST00000554338 ADAMTS12P58397 1594 aa24.41■■□□□ 1.5
RIPK3-202ENST00000554338 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
RIPK3-202ENST00000554338 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
RIPK3-202ENST00000554338 NUP160Q12769 1436 aa24.29■■□□□ 1.48
RIPK3-202ENST00000554338 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
RIPK3-202ENST00000554338 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
RIPK3-202ENST00000554338 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
RIPK3-202ENST00000554338 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
RIPK3-202ENST00000554338 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
RIPK3-202ENST00000554338 RUSC2Q8N2Y8 1516 aa24.06■■□□□ 1.44
RIPK3-202ENST00000554338 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
RIPK3-202ENST00000554338 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
RIPK3-202ENST00000554338 IGF1RP08069 1367 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms