RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
TMEM253-203ENST00000554329 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
TMEM253-203ENST00000554329 ABCC9O60706 1549 aa25.11■■□□□ 1.61
TMEM253-203ENST00000554329 DCAF8L2P0C7V8 631 aa24.01■■□□□ 1.43
TMEM253-203ENST00000554329 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
TMEM253-203ENST00000554329 NACADO15069 1562 aa23.78■■□□□ 1.4
TMEM253-203ENST00000554329 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
TMEM253-203ENST00000554329 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
TMEM253-203ENST00000554329 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
TMEM253-203ENST00000554329 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
TMEM253-203ENST00000554329 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
TMEM253-203ENST00000554329 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
TMEM253-203ENST00000554329 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
TMEM253-203ENST00000554329 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
TMEM253-203ENST00000554329 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
TMEM253-203ENST00000554329 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
TMEM253-203ENST00000554329 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.22
TMEM253-203ENST00000554329 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
TMEM253-203ENST00000554329 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
TMEM253-203ENST00000554329 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
TMEM253-203ENST00000554329 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
TMEM253-203ENST00000554329 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
TMEM253-203ENST00000554329 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
TMEM253-203ENST00000554329 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
TMEM253-203ENST00000554329 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
TMEM253-203ENST00000554329 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
TMEM253-203ENST00000554329 WIZO95785 1651 aa21.82■■□□□ 1.08
TMEM253-203ENST00000554329 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
TMEM253-203ENST00000554329 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
TMEM253-203ENST00000554329 NESP48681 1621 aa21.71■■□□□ 1.07
TMEM253-203ENST00000554329 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
TMEM253-203ENST00000554329 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
TMEM253-203ENST00000554329 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
TMEM253-203ENST00000554329 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
TMEM253-203ENST00000554329 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
TMEM253-203ENST00000554329 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
TMEM253-203ENST00000554329 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
TMEM253-203ENST00000554329 CUX2O14529 1486 aa21.26■□□□□ 0.99
TMEM253-203ENST00000554329 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
TMEM253-203ENST00000554329 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
TMEM253-203ENST00000554329 CFTRP13569 1480 aa21.19■□□□□ 0.98
TMEM253-203ENST00000554329 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
TMEM253-203ENST00000554329 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.97
TMEM253-203ENST00000554329 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
TMEM253-203ENST00000554329 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
TMEM253-203ENST00000554329 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
TMEM253-203ENST00000554329 WDR62O43379 1518 aa21.05■□□□□ 0.96
TMEM253-203ENST00000554329 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
TMEM253-203ENST00000554329 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
TMEM253-203ENST00000554329 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
TMEM253-203ENST00000554329 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
TMEM253-203ENST00000554329 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
TMEM253-203ENST00000554329 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
TMEM253-203ENST00000554329 CUX1P39880 1505 aa20.65■□□□□ 0.9
TMEM253-203ENST00000554329 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
TMEM253-203ENST00000554329 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
TMEM253-203ENST00000554329 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
TMEM253-203ENST00000554329 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
TMEM253-203ENST00000554329 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
TMEM253-203ENST00000554329 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
TMEM253-203ENST00000554329 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
TMEM253-203ENST00000554329 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
TMEM253-203ENST00000554329 SOGA1O94964 1423 aa20.52■□□□□ 0.87
TMEM253-203ENST00000554329 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
TMEM253-203ENST00000554329 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
TMEM253-203ENST00000554329 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
TMEM253-203ENST00000554329 CHD1O14646 1710 aa20.42■□□□□ 0.86
TMEM253-203ENST00000554329 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
TMEM253-203ENST00000554329 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
TMEM253-203ENST00000554329 FBLN2P98095 1184 aa20.38■□□□□ 0.85
TMEM253-203ENST00000554329 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
TMEM253-203ENST00000554329 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
TMEM253-203ENST00000554329 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
TMEM253-203ENST00000554329 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
TMEM253-203ENST00000554329 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
TMEM253-203ENST00000554329 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
TMEM253-203ENST00000554329 ABCA5Q8WWZ7 1642 aa20.28■□□□□ 0.84
TMEM253-203ENST00000554329 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
TMEM253-203ENST00000554329 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
TMEM253-203ENST00000554329 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
TMEM253-203ENST00000554329 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
TMEM253-203ENST00000554329 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
TMEM253-203ENST00000554329 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
TMEM253-203ENST00000554329 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
TMEM253-203ENST00000554329 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
TMEM253-203ENST00000554329 SYNJ2O15056 1496 aa20.15■□□□□ 0.82
TMEM253-203ENST00000554329 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
TMEM253-203ENST00000554329 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
TMEM253-203ENST00000554329 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
TMEM253-203ENST00000554329 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
TMEM253-203ENST00000554329 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
TMEM253-203ENST00000554329 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
TMEM253-203ENST00000554329 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
TMEM253-203ENST00000554329 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
TMEM253-203ENST00000554329 ERCC6L2Q5T890 1561 aa19.96■□□□□ 0.79
TMEM253-203ENST00000554329 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
TMEM253-203ENST00000554329 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
TMEM253-203ENST00000554329 NUP160Q12769 1436 aa19.92■□□□□ 0.78
TMEM253-203ENST00000554329 IGF1RP08069 1367 aa19.9■□□□□ 0.78
TMEM253-203ENST00000554329 CUL7Q14999 1698 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms