RNA–Protein interactions for RNA: ENST00000554284.1

NID2-203, Transcript of nidogen 2, humanhuman

TSL 5

Gene NID2, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-203ENST00000554284 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
NID2-203ENST00000554284 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
NID2-203ENST00000554284 ABCC9O60706 1549 aa24.83■■□□□ 1.57
NID2-203ENST00000554284 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
NID2-203ENST00000554284 NACADO15069 1562 aa23.63■■□□□ 1.37
NID2-203ENST00000554284 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
NID2-203ENST00000554284 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
NID2-203ENST00000554284 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
NID2-203ENST00000554284 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
NID2-203ENST00000554284 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
NID2-203ENST00000554284 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
NID2-203ENST00000554284 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
NID2-203ENST00000554284 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
NID2-203ENST00000554284 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
NID2-203ENST00000554284 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
NID2-203ENST00000554284 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
NID2-203ENST00000554284 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
NID2-203ENST00000554284 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
NID2-203ENST00000554284 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
NID2-203ENST00000554284 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
NID2-203ENST00000554284 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
NID2-203ENST00000554284 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
NID2-203ENST00000554284 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
NID2-203ENST00000554284 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
NID2-203ENST00000554284 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
NID2-203ENST00000554284 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
NID2-203ENST00000554284 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
NID2-203ENST00000554284 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
NID2-203ENST00000554284 NESP48681 1621 aa21.4■■□□□ 1.02
NID2-203ENST00000554284 CUX2O14529 1486 aa21.35■■□□□ 1.01
NID2-203ENST00000554284 WIZO95785 1651 aa21.34■■□□□ 1.01
NID2-203ENST00000554284 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
NID2-203ENST00000554284 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
NID2-203ENST00000554284 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
NID2-203ENST00000554284 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
NID2-203ENST00000554284 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
NID2-203ENST00000554284 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
NID2-203ENST00000554284 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
NID2-203ENST00000554284 DNAJC5Q9H3Z4 198 aa21.04■□□□□ 0.96
NID2-203ENST00000554284 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
NID2-203ENST00000554284 WDR62O43379 1518 aa20.94■□□□□ 0.94
NID2-203ENST00000554284 CFTRP13569 1480 aa20.93■□□□□ 0.94
NID2-203ENST00000554284 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
NID2-203ENST00000554284 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
NID2-203ENST00000554284 PRDM2Q13029 1718 aa20.89■□□□□ 0.93
NID2-203ENST00000554284 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
NID2-203ENST00000554284 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
NID2-203ENST00000554284 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
NID2-203ENST00000554284 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
NID2-203ENST00000554284 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
NID2-203ENST00000554284 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
NID2-203ENST00000554284 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
NID2-203ENST00000554284 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
NID2-203ENST00000554284 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
NID2-203ENST00000554284 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
NID2-203ENST00000554284 OSCARQ8IYS5 282 aa20.29■□□□□ 0.84
NID2-203ENST00000554284 CUX1P39880 1505 aa20.26■□□□□ 0.83
NID2-203ENST00000554284 CHD1O14646 1710 aa20.24■□□□□ 0.83
NID2-203ENST00000554284 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
NID2-203ENST00000554284 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
NID2-203ENST00000554284 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
NID2-203ENST00000554284 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
NID2-203ENST00000554284 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
NID2-203ENST00000554284 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
NID2-203ENST00000554284 SOGA1O94964 1423 aa20.18■□□□□ 0.82
NID2-203ENST00000554284 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
NID2-203ENST00000554284 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
NID2-203ENST00000554284 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
NID2-203ENST00000554284 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
NID2-203ENST00000554284 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
NID2-203ENST00000554284 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
NID2-203ENST00000554284 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
NID2-203ENST00000554284 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
NID2-203ENST00000554284 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
NID2-203ENST00000554284 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
NID2-203ENST00000554284 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
NID2-203ENST00000554284 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
NID2-203ENST00000554284 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
NID2-203ENST00000554284 FBLN2P98095 1184 aa19.99■□□□□ 0.79
NID2-203ENST00000554284 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
NID2-203ENST00000554284 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
NID2-203ENST00000554284 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
NID2-203ENST00000554284 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
NID2-203ENST00000554284 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
NID2-203ENST00000554284 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
NID2-203ENST00000554284 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
NID2-203ENST00000554284 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
NID2-203ENST00000554284 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
NID2-203ENST00000554284 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
NID2-203ENST00000554284 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.76
NID2-203ENST00000554284 CEP170Q5SW79 1584 aa19.75■□□□□ 0.75
NID2-203ENST00000554284 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
NID2-203ENST00000554284 NUP160Q12769 1436 aa19.71■□□□□ 0.75
NID2-203ENST00000554284 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
NID2-203ENST00000554284 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
NID2-203ENST00000554284 RUSC2Q8N2Y8 1516 aa19.59■□□□□ 0.73
NID2-203ENST00000554284 CUL7Q14999 1698 aa19.57■□□□□ 0.72
NID2-203ENST00000554284 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
NID2-203ENST00000554284 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
NID2-203ENST00000554284 IGF1RP08069 1367 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms