RNA–Protein interactions for RNA: ENST00000554232.5

UBR7-204, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 4

Gene UBR7, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-204ENST00000554232 NISCHQ9Y2I1 1504 aa50.59■■■■■ 5.69
UBR7-204ENST00000554232 CCDC180Q9P1Z9 1646 aa45.12■■■■■ 4.81
UBR7-204ENST00000554232 ABCC9O60706 1549 aa43.79■■■■■ 4.6
UBR7-204ENST00000554232 RB1CC1Q8TDY2 1594 aa42.31■■■■■ 4.36
UBR7-204ENST00000554232 NACADO15069 1562 aa42.27■■■■■ 4.36
UBR7-204ENST00000554232 ZCCHC6Q5VYS8 1495 aaKnown RBP42.21■■■■■ 4.35
UBR7-204ENST00000554232 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
UBR7-204ENST00000554232 DCAF8L2P0C7V8 631 aa42.04■■■■■ 4.32
UBR7-204ENST00000554232 DCAF1Q9Y4B6 1507 aa41.92■■■■■ 4.3
UBR7-204ENST00000554232 UNC13AQ9UPW8 1703 aa41.47■■■■■ 4.23
UBR7-204ENST00000554232 SCRIBQ14160 1630 aa41.07■■■■■ 4.16
UBR7-204ENST00000554232 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
UBR7-204ENST00000554232 PABPN1Q86U42 306 aaKnown RBP eCLIP40.82■■■■■ 4.13
UBR7-204ENST00000554232 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
UBR7-204ENST00000554232 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
UBR7-204ENST00000554232 DNAJC5BQ9UF47 199 aa39.88■■■■□ 3.97
UBR7-204ENST00000554232 CC2D2AQ9P2K1 1620 aa39.7■■■■□ 3.95
UBR7-204ENST00000554232 CECR2Q9BXF3 1484 aa39.35■■■■□ 3.89
UBR7-204ENST00000554232 SMARCA4P51532 1647 aa39.31■■■■□ 3.88
UBR7-204ENST00000554232 BAZ1AQ9NRL2 1556 aaPredicted RBP39.27■■■■□ 3.88
UBR7-204ENST00000554232 SMARCA2P51531 1590 aa39.01■■■■□ 3.84
UBR7-204ENST00000554232 MROH2BQ7Z745 1585 aa38.97■■■■□ 3.83
UBR7-204ENST00000554232 ATAD2BQ9ULI0 1458 aa38.94■■■■□ 3.82
UBR7-204ENST00000554232 PEG3Q9GZU2 1588 aa38.91■■■■□ 3.82
UBR7-204ENST00000554232 NCAPD3P42695 1498 aa38.9■■■■□ 3.82
UBR7-204ENST00000554232 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
UBR7-204ENST00000554232 BAZ1BQ9UIG0 1483 aaKnown RBP38.7■■■■□ 3.79
UBR7-204ENST00000554232 WIZO95785 1651 aa38.63■■■■□ 3.77
UBR7-204ENST00000554232 RSF1Q96T23 1441 aaPredicted RBP38.52■■■■□ 3.76
UBR7-204ENST00000554232 TOP2AP11388 1531 aaKnown RBP38.24■■■■□ 3.71
UBR7-204ENST00000554232 LAMC3Q9Y6N6 1575 aa37.98■■■■□ 3.67
UBR7-204ENST00000554232 NESP48681 1621 aa37.93■■■■□ 3.66
UBR7-204ENST00000554232 ERCC6Q03468 1493 aa37.8■■■■□ 3.64
UBR7-204ENST00000554232 CADPSQ9ULU8 1353 aa37.75■■■■□ 3.63
UBR7-204ENST00000554232 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
UBR7-204ENST00000554232 KIF21AQ7Z4S6 1674 aa37.66■■■■□ 3.62
UBR7-204ENST00000554232 PRDM2Q13029 1718 aa37.63■■■■□ 3.61
UBR7-204ENST00000554232 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
UBR7-204ENST00000554232 CFTRP13569 1480 aa37.59■■■■□ 3.61
UBR7-204ENST00000554232 SUPT5HO00267 1087 aaKnown RBP37.57■■■■□ 3.6
UBR7-204ENST00000554232 THOC2Q8NI27 1593 aaKnown RBP37.46■■■■□ 3.59
UBR7-204ENST00000554232 FANCD2Q9BXW9 1451 aa37.38■■■■□ 3.57
UBR7-204ENST00000554232 CUX2O14529 1486 aa37.37■■■■□ 3.57
UBR7-204ENST00000554232 CEP164Q9UPV0 1460 aa37.37■■■■□ 3.57
UBR7-204ENST00000554232 MRC2Q9UBG0 1479 aa37.27■■■■□ 3.56
UBR7-204ENST00000554232 WDR62O43379 1518 aa37.18■■■■□ 3.54
UBR7-204ENST00000554232 URB2Q14146 1524 aaKnown RBP36.99■■■■□ 3.51
UBR7-204ENST00000554232 ABCC8Q09428 1581 aa36.84■■■■□ 3.49
UBR7-204ENST00000554232 DNMBPQ6XZF7 1577 aa36.84■■■■□ 3.49
UBR7-204ENST00000554232 TOPBP1Q92547 1522 aa36.81■■■■□ 3.48
UBR7-204ENST00000554232 CUX1P39880 1505 aa36.58■■■■□ 3.45
UBR7-204ENST00000554232 IFT140Q96RY7 1462 aa36.55■■■■□ 3.44
UBR7-204ENST00000554232 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
UBR7-204ENST00000554232 TARBP1Q13395 1621 aaKnown RBP36.44■■■■□ 3.42
UBR7-204ENST00000554232 FGD5Q6ZNL6 1462 aa36.43■■■■□ 3.42
UBR7-204ENST00000554232 BIVM-ERCC5R4GMW8 1640 aa36.41■■■■□ 3.42
UBR7-204ENST00000554232 WRNQ14191 1432 aaPredicted RBP eCLIP36.37■■■■□ 3.41
UBR7-204ENST00000554232 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
UBR7-204ENST00000554232 SYNJ1O43426 1573 aa36.33■■■■□ 3.41
UBR7-204ENST00000554232 EIF4G3O43432 1585 aaKnown RBP36.33■■■■□ 3.41
UBR7-204ENST00000554232 ZNF608Q9ULD9 1512 aaPredicted RBP36.32■■■■□ 3.4
UBR7-204ENST00000554232 SOGA1O94964 1423 aa36.29■■■■□ 3.4
UBR7-204ENST00000554232 WDR97A6NE52 1622 aa36.28■■■■□ 3.4
UBR7-204ENST00000554232 RAD54L2Q9Y4B4 1467 aa36.28■■■■□ 3.4
UBR7-204ENST00000554232 ABCA10Q8WWZ4 1543 aa36.09■■■■□ 3.37
UBR7-204ENST00000554232 AQRO60306 1485 aaKnown RBP eCLIP36.09■■■■□ 3.37
UBR7-204ENST00000554232 PBRM1Q86U86 1689 aa36.03■■■■□ 3.36
UBR7-204ENST00000554232 TDRD9Q8NDG6 1382 aaKnown RBP36.03■■■■□ 3.36
UBR7-204ENST00000554232 ABCA5Q8WWZ7 1642 aa36.02■■■■□ 3.36
UBR7-204ENST00000554232 GAPVD1Q14C86 1478 aa35.92■■■■□ 3.34
UBR7-204ENST00000554232 GRIN2BQ13224 1484 aa35.92■■■■□ 3.34
UBR7-204ENST00000554232 CHD1O14646 1710 aa35.9■■■■□ 3.34
UBR7-204ENST00000554232 DNAJC5Q9H3Z4 198 aa35.88■■■■□ 3.33
UBR7-204ENST00000554232 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
UBR7-204ENST00000554232 MAGI1Q96QZ7 1491 aaPredicted RBP35.84■■■■□ 3.33
UBR7-204ENST00000554232 ERICH3Q5RHP9 1530 aa35.7■■■■□ 3.31
UBR7-204ENST00000554232 OSCARQ8IYS5 282 aa35.69■■■■□ 3.3
UBR7-204ENST00000554232 SYNJ2O15056 1496 aa35.68■■■■□ 3.3
UBR7-204ENST00000554232 ADAMTS12P58397 1594 aa35.67■■■■□ 3.3
UBR7-204ENST00000554232 FBLN2P98095 1184 aa35.61■■■■□ 3.29
UBR7-204ENST00000554232 KIF27Q86VH2 1401 aa35.6■■■■□ 3.29
UBR7-204ENST00000554232 CHMP7Q8WUX9 453 aaPredicted RBP35.55■■■■□ 3.28
UBR7-204ENST00000554232 FHAD1B1AJZ9 1412 aa35.5■■■■□ 3.27
UBR7-204ENST00000554232 CUL7Q14999 1698 aa35.5■■■■□ 3.27
UBR7-204ENST00000554232 TRIM41Q8WV44 630 aa35.5■■■■□ 3.27
UBR7-204ENST00000554232 GRIN2AQ12879 1464 aa35.47■■■■□ 3.27
UBR7-204ENST00000554232 CLASP1Q7Z460 1538 aa35.41■■■■□ 3.26
UBR7-204ENST00000554232 IGF1RP08069 1367 aa35.33■■■■□ 3.25
UBR7-204ENST00000554232 CEP170Q5SW79 1584 aa35.31■■■■□ 3.24
UBR7-204ENST00000554232 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
UBR7-204ENST00000554232 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
UBR7-204ENST00000554232 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
UBR7-204ENST00000554232 NUP160Q12769 1436 aa35.27■■■■□ 3.24
UBR7-204ENST00000554232 ARHGEF11O15085 1522 aa35.25■■■■□ 3.23
UBR7-204ENST00000554232 RUSC2Q8N2Y8 1516 aa35.25■■■■□ 3.23
UBR7-204ENST00000554232 CARMIL1Q5VZK9 1371 aa35.17■■■■□ 3.22
UBR7-204ENST00000554232 CHIC1Q5VXU3 224 aa35.12■■■■□ 3.21
UBR7-204ENST00000554232 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
UBR7-204ENST00000554232 EEA1Q15075 1411 aa35.05■■■■□ 3.2
UBR7-204ENST00000554232 RAPGEF2Q9Y4G8 1499 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms