RNA–Protein interactions for RNA: ENST00000554172.2

PAX2-208, Transcript of paired box 2, humanhuman

TSL 1 (best)

Gene PAX2, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX2-208ENST00000554172 NISCHQ9Y2I1 1504 aa38.97■■■■□ 3.83
PAX2-208ENST00000554172 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
PAX2-208ENST00000554172 ABCC9O60706 1549 aa32.72■■■□□ 2.83
PAX2-208ENST00000554172 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
PAX2-208ENST00000554172 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
PAX2-208ENST00000554172 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
PAX2-208ENST00000554172 MYO15BQ96JP2 1530 aa31.94■■■□□ 2.7
PAX2-208ENST00000554172 NACADO15069 1562 aa31.91■■■□□ 2.7
PAX2-208ENST00000554172 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.67
PAX2-208ENST00000554172 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
PAX2-208ENST00000554172 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
PAX2-208ENST00000554172 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
PAX2-208ENST00000554172 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
PAX2-208ENST00000554172 PABPN1Q86U42 306 aaKnown RBP eCLIP30.74■■■□□ 2.51
PAX2-208ENST00000554172 CECR2Q9BXF3 1484 aa30.35■■■□□ 2.45
PAX2-208ENST00000554172 MROH2BQ7Z745 1585 aa30.13■■■□□ 2.41
PAX2-208ENST00000554172 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
PAX2-208ENST00000554172 SMARCA4P51532 1647 aa30.09■■■□□ 2.41
PAX2-208ENST00000554172 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
PAX2-208ENST00000554172 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
PAX2-208ENST00000554172 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
PAX2-208ENST00000554172 WIZO95785 1651 aa29.91■■■□□ 2.38
PAX2-208ENST00000554172 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.34
PAX2-208ENST00000554172 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
PAX2-208ENST00000554172 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
PAX2-208ENST00000554172 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
PAX2-208ENST00000554172 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
PAX2-208ENST00000554172 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
PAX2-208ENST00000554172 NCAPD3P42695 1498 aa29.43■■■□□ 2.3
PAX2-208ENST00000554172 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
PAX2-208ENST00000554172 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
PAX2-208ENST00000554172 CCDC88BA6NC98 1476 aa29.2■■■□□ 2.27
PAX2-208ENST00000554172 CFTRP13569 1480 aa28.67■■■□□ 2.18
PAX2-208ENST00000554172 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
PAX2-208ENST00000554172 CADPSQ9ULU8 1353 aa28.64■■■□□ 2.18
PAX2-208ENST00000554172 NESP48681 1621 aa28.62■■■□□ 2.17
PAX2-208ENST00000554172 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
PAX2-208ENST00000554172 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
PAX2-208ENST00000554172 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
PAX2-208ENST00000554172 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
PAX2-208ENST00000554172 KIF21AQ7Z4S6 1674 aa28.34■■■□□ 2.13
PAX2-208ENST00000554172 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
PAX2-208ENST00000554172 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
PAX2-208ENST00000554172 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
PAX2-208ENST00000554172 TRIM41Q8WV44 630 aa28.27■■■□□ 2.12
PAX2-208ENST00000554172 CEP164Q9UPV0 1460 aa28.23■■■□□ 2.11
PAX2-208ENST00000554172 CUX1P39880 1505 aa28.19■■■□□ 2.1
PAX2-208ENST00000554172 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
PAX2-208ENST00000554172 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
PAX2-208ENST00000554172 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
PAX2-208ENST00000554172 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
PAX2-208ENST00000554172 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
PAX2-208ENST00000554172 TOPBP1Q92547 1522 aa28.03■■■□□ 2.08
PAX2-208ENST00000554172 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
PAX2-208ENST00000554172 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
PAX2-208ENST00000554172 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
PAX2-208ENST00000554172 WDR62O43379 1518 aa27.87■■■□□ 2.05
PAX2-208ENST00000554172 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
PAX2-208ENST00000554172 SOGA1O94964 1423 aa27.84■■■□□ 2.05
PAX2-208ENST00000554172 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
PAX2-208ENST00000554172 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
PAX2-208ENST00000554172 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
PAX2-208ENST00000554172 WDR97A6NE52 1622 aa27.71■■■□□ 2.03
PAX2-208ENST00000554172 CUX2O14529 1486 aa27.69■■■□□ 2.02
PAX2-208ENST00000554172 TARBP1Q13395 1621 aaKnown RBP27.68■■■□□ 2.02
PAX2-208ENST00000554172 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
PAX2-208ENST00000554172 EEA1Q15075 1411 aa27.62■■■□□ 2.01
PAX2-208ENST00000554172 KIF27Q86VH2 1401 aa27.58■■■□□ 2.01
PAX2-208ENST00000554172 IFT140Q96RY7 1462 aa27.56■■■□□ 2
PAX2-208ENST00000554172 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
PAX2-208ENST00000554172 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
PAX2-208ENST00000554172 TDRD9Q8NDG6 1382 aaKnown RBP27.51■■□□□ 1.99
PAX2-208ENST00000554172 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
PAX2-208ENST00000554172 ZNF608Q9ULD9 1512 aaPredicted RBP27.48■■□□□ 1.99
PAX2-208ENST00000554172 EHMT2Q96KQ7 1210 aa27.46■■□□□ 1.99
PAX2-208ENST00000554172 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.98
PAX2-208ENST00000554172 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
PAX2-208ENST00000554172 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
PAX2-208ENST00000554172 EIF4G3O43432 1585 aaKnown RBP27.41■■□□□ 1.98
PAX2-208ENST00000554172 IGF1RP08069 1367 aa27.4■■□□□ 1.98
PAX2-208ENST00000554172 KIF21BO75037 1637 aa27.37■■□□□ 1.97
PAX2-208ENST00000554172 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
PAX2-208ENST00000554172 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
PAX2-208ENST00000554172 CUL7Q14999 1698 aa27.29■■□□□ 1.96
PAX2-208ENST00000554172 RAPGEF2Q9Y4G8 1499 aa27.29■■□□□ 1.96
PAX2-208ENST00000554172 GOLGA3Q08378 1498 aa27.26■■□□□ 1.96
PAX2-208ENST00000554172 GRIN2BQ13224 1484 aa27.26■■□□□ 1.96
PAX2-208ENST00000554172 CARMIL1Q5VZK9 1371 aa27.26■■□□□ 1.95
PAX2-208ENST00000554172 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
PAX2-208ENST00000554172 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
PAX2-208ENST00000554172 UBTFP17480 764 aaKnown RBP27.14■■□□□ 1.94
PAX2-208ENST00000554172 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
PAX2-208ENST00000554172 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
PAX2-208ENST00000554172 TNIKQ9UKE5 1360 aa27.08■■□□□ 1.92
PAX2-208ENST00000554172 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
PAX2-208ENST00000554172 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
PAX2-208ENST00000554172 GRIN2AQ12879 1464 aa26.95■■□□□ 1.91
PAX2-208ENST00000554172 CHD1O14646 1710 aa26.95■■□□□ 1.9
PAX2-208ENST00000554172 CEP162Q5TB80 1403 aa26.93■■□□□ 1.9
PAX2-208ENST00000554172 FBLN2P98095 1184 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms