RNA–Protein interactions for RNA: ENST00000554162.1

NEMF-203, Transcript of nuclear export mediator factor, humanhuman

TSL 5

Gene NEMF, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-203ENST00000554162 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
NEMF-203ENST00000554162 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
NEMF-203ENST00000554162 ABCC9O60706 1549 aa26.02■■□□□ 1.76
NEMF-203ENST00000554162 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
NEMF-203ENST00000554162 NACADO15069 1562 aa24.75■■□□□ 1.55
NEMF-203ENST00000554162 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
NEMF-203ENST00000554162 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
NEMF-203ENST00000554162 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
NEMF-203ENST00000554162 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
NEMF-203ENST00000554162 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
NEMF-203ENST00000554162 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
NEMF-203ENST00000554162 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
NEMF-203ENST00000554162 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
NEMF-203ENST00000554162 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
NEMF-203ENST00000554162 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
NEMF-203ENST00000554162 CC2D2AQ9P2K1 1620 aa23.54■■□□□ 1.36
NEMF-203ENST00000554162 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
NEMF-203ENST00000554162 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
NEMF-203ENST00000554162 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
NEMF-203ENST00000554162 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
NEMF-203ENST00000554162 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
NEMF-203ENST00000554162 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
NEMF-203ENST00000554162 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
NEMF-203ENST00000554162 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
NEMF-203ENST00000554162 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
NEMF-203ENST00000554162 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
NEMF-203ENST00000554162 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
NEMF-203ENST00000554162 CUX2O14529 1486 aa22.47■■□□□ 1.19
NEMF-203ENST00000554162 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
NEMF-203ENST00000554162 NESP48681 1621 aa22.35■■□□□ 1.17
NEMF-203ENST00000554162 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
NEMF-203ENST00000554162 DNAJC5Q9H3Z4 198 aa22.23■■□□□ 1.15
NEMF-203ENST00000554162 WIZO95785 1651 aa22.2■■□□□ 1.14
NEMF-203ENST00000554162 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
NEMF-203ENST00000554162 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
NEMF-203ENST00000554162 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
NEMF-203ENST00000554162 CADPSQ9ULU8 1353 aa22.1■■□□□ 1.13
NEMF-203ENST00000554162 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
NEMF-203ENST00000554162 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
NEMF-203ENST00000554162 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
NEMF-203ENST00000554162 WDR62O43379 1518 aa21.92■■□□□ 1.1
NEMF-203ENST00000554162 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
NEMF-203ENST00000554162 CFTRP13569 1480 aa21.88■■□□□ 1.09
NEMF-203ENST00000554162 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
NEMF-203ENST00000554162 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
NEMF-203ENST00000554162 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
NEMF-203ENST00000554162 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
NEMF-203ENST00000554162 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
NEMF-203ENST00000554162 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
NEMF-203ENST00000554162 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
NEMF-203ENST00000554162 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
NEMF-203ENST00000554162 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
NEMF-203ENST00000554162 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
NEMF-203ENST00000554162 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
NEMF-203ENST00000554162 TRIM41Q8WV44 630 aa21.29■■□□□ 1
NEMF-203ENST00000554162 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
NEMF-203ENST00000554162 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
NEMF-203ENST00000554162 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
NEMF-203ENST00000554162 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.987e-6■■□□□ 12.2
NEMF-203ENST00000554162 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
NEMF-203ENST00000554162 SOGA1O94964 1423 aa21.12■□□□□ 0.97
NEMF-203ENST00000554162 CHD1O14646 1710 aa21.12■□□□□ 0.97
NEMF-203ENST00000554162 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
NEMF-203ENST00000554162 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
NEMF-203ENST00000554162 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
NEMF-203ENST00000554162 RAD54L2Q9Y4B4 1467 aa21.11■□□□□ 0.97
NEMF-203ENST00000554162 CUX1P39880 1505 aa21.1■□□□□ 0.97
NEMF-203ENST00000554162 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
NEMF-203ENST00000554162 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
NEMF-203ENST00000554162 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
NEMF-203ENST00000554162 FBLN2P98095 1184 aa21■□□□□ 0.95
NEMF-203ENST00000554162 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
NEMF-203ENST00000554162 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
NEMF-203ENST00000554162 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
NEMF-203ENST00000554162 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
NEMF-203ENST00000554162 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
NEMF-203ENST00000554162 ABCA10Q8WWZ4 1543 aa20.91■□□□□ 0.94
NEMF-203ENST00000554162 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
NEMF-203ENST00000554162 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
NEMF-203ENST00000554162 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
NEMF-203ENST00000554162 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
NEMF-203ENST00000554162 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
NEMF-203ENST00000554162 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
NEMF-203ENST00000554162 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
NEMF-203ENST00000554162 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
NEMF-203ENST00000554162 TOP2BQ02880 1626 aa20.84■□□□□ 0.93
NEMF-203ENST00000554162 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
NEMF-203ENST00000554162 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
NEMF-203ENST00000554162 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
NEMF-203ENST00000554162 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
NEMF-203ENST00000554162 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
NEMF-203ENST00000554162 NUP160Q12769 1436 aa20.61■□□□□ 0.89
NEMF-203ENST00000554162 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
NEMF-203ENST00000554162 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
NEMF-203ENST00000554162 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
NEMF-203ENST00000554162 ERCC6L2Q5T890 1561 aa20.49■□□□□ 0.87
NEMF-203ENST00000554162 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
NEMF-203ENST00000554162 CUL7Q14999 1698 aa20.43■□□□□ 0.86
NEMF-203ENST00000554162 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
NEMF-203ENST00000554162 PRG4Q92954 1404 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 338.2 ms