RNA–Protein interactions for RNA: ENST00000554155.1

HSD17B6-204, Transcript of hydroxysteroid 17-beta dehydrogenase 6, humanhuman

TSL 3

Gene HSD17B6, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSD17B6-204ENST00000554155 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
HSD17B6-204ENST00000554155 ABCC9O60706 1549 aa29.1■■■□□ 2.25
HSD17B6-204ENST00000554155 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
HSD17B6-204ENST00000554155 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
HSD17B6-204ENST00000554155 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
HSD17B6-204ENST00000554155 NACADO15069 1562 aa27.51■■□□□ 1.99
HSD17B6-204ENST00000554155 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
HSD17B6-204ENST00000554155 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
HSD17B6-204ENST00000554155 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
HSD17B6-204ENST00000554155 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
HSD17B6-204ENST00000554155 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
HSD17B6-204ENST00000554155 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
HSD17B6-204ENST00000554155 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
HSD17B6-204ENST00000554155 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
HSD17B6-204ENST00000554155 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
HSD17B6-204ENST00000554155 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
HSD17B6-204ENST00000554155 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
HSD17B6-204ENST00000554155 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
HSD17B6-204ENST00000554155 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
HSD17B6-204ENST00000554155 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
HSD17B6-204ENST00000554155 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
HSD17B6-204ENST00000554155 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
HSD17B6-204ENST00000554155 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
HSD17B6-204ENST00000554155 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
HSD17B6-204ENST00000554155 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
HSD17B6-204ENST00000554155 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
HSD17B6-204ENST00000554155 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
HSD17B6-204ENST00000554155 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
HSD17B6-204ENST00000554155 NESP48681 1621 aa25.01■■□□□ 1.59
HSD17B6-204ENST00000554155 CUX2O14529 1486 aa24.96■■□□□ 1.59
HSD17B6-204ENST00000554155 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
HSD17B6-204ENST00000554155 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
HSD17B6-204ENST00000554155 WIZO95785 1651 aa24.79■■□□□ 1.56
HSD17B6-204ENST00000554155 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
HSD17B6-204ENST00000554155 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
HSD17B6-204ENST00000554155 THOC2Q8NI27 1593 aaKnown RBP24.66■■□□□ 1.54
HSD17B6-204ENST00000554155 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
HSD17B6-204ENST00000554155 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
HSD17B6-204ENST00000554155 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
HSD17B6-204ENST00000554155 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
HSD17B6-204ENST00000554155 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
HSD17B6-204ENST00000554155 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
HSD17B6-204ENST00000554155 CFTRP13569 1480 aa24.38■■□□□ 1.49
HSD17B6-204ENST00000554155 WDR62O43379 1518 aa24.36■■□□□ 1.49
HSD17B6-204ENST00000554155 CCDC88BA6NC98 1476 aa24.23■■□□□ 1.47
HSD17B6-204ENST00000554155 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
HSD17B6-204ENST00000554155 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
HSD17B6-204ENST00000554155 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
HSD17B6-204ENST00000554155 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
HSD17B6-204ENST00000554155 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
HSD17B6-204ENST00000554155 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
HSD17B6-204ENST00000554155 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
HSD17B6-204ENST00000554155 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
HSD17B6-204ENST00000554155 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.41
HSD17B6-204ENST00000554155 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
HSD17B6-204ENST00000554155 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
HSD17B6-204ENST00000554155 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
HSD17B6-204ENST00000554155 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
HSD17B6-204ENST00000554155 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
HSD17B6-204ENST00000554155 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
HSD17B6-204ENST00000554155 SOGA1O94964 1423 aa23.64■■□□□ 1.37
HSD17B6-204ENST00000554155 FBLN2P98095 1184 aa23.62■■□□□ 1.37
HSD17B6-204ENST00000554155 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
HSD17B6-204ENST00000554155 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
HSD17B6-204ENST00000554155 CUX1P39880 1505 aa23.56■■□□□ 1.36
HSD17B6-204ENST00000554155 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
HSD17B6-204ENST00000554155 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
HSD17B6-204ENST00000554155 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
HSD17B6-204ENST00000554155 CHD1O14646 1710 aa23.51■■□□□ 1.35
HSD17B6-204ENST00000554155 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
HSD17B6-204ENST00000554155 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
HSD17B6-204ENST00000554155 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
HSD17B6-204ENST00000554155 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
HSD17B6-204ENST00000554155 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
HSD17B6-204ENST00000554155 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
HSD17B6-204ENST00000554155 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
HSD17B6-204ENST00000554155 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
HSD17B6-204ENST00000554155 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
HSD17B6-204ENST00000554155 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
HSD17B6-204ENST00000554155 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
HSD17B6-204ENST00000554155 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
HSD17B6-204ENST00000554155 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
HSD17B6-204ENST00000554155 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
HSD17B6-204ENST00000554155 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
HSD17B6-204ENST00000554155 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
HSD17B6-204ENST00000554155 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
HSD17B6-204ENST00000554155 BIVM-ERCC5R4GMW8 1640 aa23.18■■□□□ 1.3
HSD17B6-204ENST00000554155 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
HSD17B6-204ENST00000554155 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
HSD17B6-204ENST00000554155 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
HSD17B6-204ENST00000554155 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
HSD17B6-204ENST00000554155 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
HSD17B6-204ENST00000554155 NUP160Q12769 1436 aa22.97■■□□□ 1.27
HSD17B6-204ENST00000554155 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
HSD17B6-204ENST00000554155 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
HSD17B6-204ENST00000554155 JPH4Q96JJ6 628 aa22.83■■□□□ 1.25
HSD17B6-204ENST00000554155 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
HSD17B6-204ENST00000554155 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
HSD17B6-204ENST00000554155 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
HSD17B6-204ENST00000554155 IGF1RP08069 1367 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms