RNA–Protein interactions for RNA: ENST00000554059.1

SLC39A9-205, Transcript of solute carrier family 39 member 9, humanhuman

TSL 1 (best)

Gene SLC39A9, Length 1,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-205ENST00000554059 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
SLC39A9-205ENST00000554059 CCDC180Q9P1Z9 1646 aa34.24■■■■□ 3.07
SLC39A9-205ENST00000554059 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.84
SLC39A9-205ENST00000554059 ABCC9O60706 1549 aa32.45■■■□□ 2.78
SLC39A9-205ENST00000554059 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
SLC39A9-205ENST00000554059 DCAF1Q9Y4B6 1507 aa32.39■■■□□ 2.78
SLC39A9-205ENST00000554059 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
SLC39A9-205ENST00000554059 NACADO15069 1562 aa31.93■■■□□ 2.7
SLC39A9-205ENST00000554059 SHROOM4Q9ULL8 1493 aa31.79■■■□□ 2.68
SLC39A9-205ENST00000554059 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.66
SLC39A9-205ENST00000554059 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
SLC39A9-205ENST00000554059 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.55
SLC39A9-205ENST00000554059 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
SLC39A9-205ENST00000554059 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
SLC39A9-205ENST00000554059 PABPN1Q86U42 306 aaKnown RBP eCLIP30.57■■■□□ 2.48
SLC39A9-205ENST00000554059 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
SLC39A9-205ENST00000554059 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
SLC39A9-205ENST00000554059 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
SLC39A9-205ENST00000554059 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.42
SLC39A9-205ENST00000554059 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
SLC39A9-205ENST00000554059 WIZO95785 1651 aa29.96■■■□□ 2.39
SLC39A9-205ENST00000554059 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
SLC39A9-205ENST00000554059 PEG3Q9GZU2 1588 aa29.76■■■□□ 2.35
SLC39A9-205ENST00000554059 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
SLC39A9-205ENST00000554059 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
SLC39A9-205ENST00000554059 ATAD2BQ9ULI0 1458 aa29.65■■■□□ 2.34
SLC39A9-205ENST00000554059 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
SLC39A9-205ENST00000554059 NCAPD3P42695 1498 aa29.45■■■□□ 2.3
SLC39A9-205ENST00000554059 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
SLC39A9-205ENST00000554059 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
SLC39A9-205ENST00000554059 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
SLC39A9-205ENST00000554059 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
SLC39A9-205ENST00000554059 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
SLC39A9-205ENST00000554059 CFTRP13569 1480 aa28.75■■■□□ 2.19
SLC39A9-205ENST00000554059 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
SLC39A9-205ENST00000554059 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
SLC39A9-205ENST00000554059 ABCC8Q09428 1581 aa28.66■■■□□ 2.18
SLC39A9-205ENST00000554059 PRDM2Q13029 1718 aa28.64■■■□□ 2.18
SLC39A9-205ENST00000554059 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
SLC39A9-205ENST00000554059 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
SLC39A9-205ENST00000554059 NESP48681 1621 aa28.42■■■□□ 2.14
SLC39A9-205ENST00000554059 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
SLC39A9-205ENST00000554059 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
SLC39A9-205ENST00000554059 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
SLC39A9-205ENST00000554059 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
SLC39A9-205ENST00000554059 PDS5BQ9NTI5 1447 aa28.3■■■□□ 2.12
SLC39A9-205ENST00000554059 CUX1P39880 1505 aa28.25■■■□□ 2.11
SLC39A9-205ENST00000554059 FAM9AQ8IZU1 332 aaPredicted RBP28.22■■■□□ 2.11
SLC39A9-205ENST00000554059 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
SLC39A9-205ENST00000554059 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
SLC39A9-205ENST00000554059 EEA1Q15075 1411 aa28.11■■■□□ 2.09
SLC39A9-205ENST00000554059 SOGA1O94964 1423 aa28.1■■■□□ 2.09
SLC39A9-205ENST00000554059 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
SLC39A9-205ENST00000554059 LOC105371045A0A1W2PR82 267 aa28.04■■■□□ 2.08
SLC39A9-205ENST00000554059 TOPBP1Q92547 1522 aa28.03■■■□□ 2.08
SLC39A9-205ENST00000554059 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
SLC39A9-205ENST00000554059 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
SLC39A9-205ENST00000554059 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
SLC39A9-205ENST00000554059 CSRNP3Q8WYN3 585 aa27.96■■■□□ 2.07
SLC39A9-205ENST00000554059 ERCC6Q03468 1493 aa27.9■■■□□ 2.06
SLC39A9-205ENST00000554059 MRC2Q9UBG0 1479 aa27.9■■■□□ 2.06
SLC39A9-205ENST00000554059 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
SLC39A9-205ENST00000554059 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
SLC39A9-205ENST00000554059 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
SLC39A9-205ENST00000554059 CUX2O14529 1486 aa27.79■■■□□ 2.04
SLC39A9-205ENST00000554059 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
SLC39A9-205ENST00000554059 ABCA10Q8WWZ4 1543 aa27.75■■■□□ 2.03
SLC39A9-205ENST00000554059 WDR62O43379 1518 aa27.74■■■□□ 2.03
SLC39A9-205ENST00000554059 KIF21BO75037 1637 aa27.71■■■□□ 2.03
SLC39A9-205ENST00000554059 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
SLC39A9-205ENST00000554059 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
SLC39A9-205ENST00000554059 WDR97A6NE52 1622 aa27.64■■■□□ 2.02
SLC39A9-205ENST00000554059 UBTFP17480 764 aaKnown RBP27.62■■■□□ 2.01
SLC39A9-205ENST00000554059 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
SLC39A9-205ENST00000554059 IGF1RP08069 1367 aa27.6■■■□□ 2.01
SLC39A9-205ENST00000554059 PRXQ9BXM0 1461 aa27.59■■■□□ 2.01
SLC39A9-205ENST00000554059 TNIKQ9UKE5 1360 aa27.57■■■□□ 2
SLC39A9-205ENST00000554059 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
SLC39A9-205ENST00000554059 IFT140Q96RY7 1462 aa27.55■■■□□ 2
SLC39A9-205ENST00000554059 RAPGEF2Q9Y4G8 1499 aa27.54■■■□□ 2
SLC39A9-205ENST00000554059 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
SLC39A9-205ENST00000554059 ABCA5Q8WWZ7 1642 aa27.51■■■□□ 2
SLC39A9-205ENST00000554059 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
SLC39A9-205ENST00000554059 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
SLC39A9-205ENST00000554059 CUL7Q14999 1698 aa27.44■■□□□ 1.98
SLC39A9-205ENST00000554059 CEP162Q5TB80 1403 aa27.39■■□□□ 1.97
SLC39A9-205ENST00000554059 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.97
SLC39A9-205ENST00000554059 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
SLC39A9-205ENST00000554059 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
SLC39A9-205ENST00000554059 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
SLC39A9-205ENST00000554059 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
SLC39A9-205ENST00000554059 CLIP1P30622 1438 aa27.23■■□□□ 1.95
SLC39A9-205ENST00000554059 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
SLC39A9-205ENST00000554059 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
SLC39A9-205ENST00000554059 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
SLC39A9-205ENST00000554059 SNAPC4Q5SXM2 1469 aa27.12■■□□□ 1.93
SLC39A9-205ENST00000554059 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
SLC39A9-205ENST00000554059 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
SLC39A9-205ENST00000554059 SYNJ2O15056 1496 aa27■■□□□ 1.91
SLC39A9-205ENST00000554059 CHMP7Q8WUX9 453 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms