RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
MTHFD1-205ENST00000554057 ABCC9O60706 1549 aa15.77■□□□□ 0.11
MTHFD1-205ENST00000554057 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
MTHFD1-205ENST00000554057 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
MTHFD1-205ENST00000554057 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
MTHFD1-205ENST00000554057 NACADO15069 1562 aa14.77□□□□□ -0.05
MTHFD1-205ENST00000554057 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
MTHFD1-205ENST00000554057 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
MTHFD1-205ENST00000554057 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
MTHFD1-205ENST00000554057 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
MTHFD1-205ENST00000554057 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
MTHFD1-205ENST00000554057 ZCCHC6Q5VYS8 1495 aaKnown RBP14.33□□□□□ -0.12
MTHFD1-205ENST00000554057 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
MTHFD1-205ENST00000554057 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
MTHFD1-205ENST00000554057 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
MTHFD1-205ENST00000554057 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
MTHFD1-205ENST00000554057 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
MTHFD1-205ENST00000554057 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
MTHFD1-205ENST00000554057 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
MTHFD1-205ENST00000554057 CUX2O14529 1486 aa13.62□□□□□ -0.23
MTHFD1-205ENST00000554057 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
MTHFD1-205ENST00000554057 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
MTHFD1-205ENST00000554057 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
MTHFD1-205ENST00000554057 SMARCA4P51532 1647 aa13.55□□□□□ -0.24
MTHFD1-205ENST00000554057 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
MTHFD1-205ENST00000554057 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
MTHFD1-205ENST00000554057 NESP48681 1621 aa13.5□□□□□ -0.25
MTHFD1-205ENST00000554057 BAZ1BQ9UIG0 1483 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-205ENST00000554057 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-205ENST00000554057 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-205ENST00000554057 PEG3Q9GZU2 1588 aa13.4□□□□□ -0.26
MTHFD1-205ENST00000554057 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
MTHFD1-205ENST00000554057 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
MTHFD1-205ENST00000554057 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
MTHFD1-205ENST00000554057 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
MTHFD1-205ENST00000554057 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
MTHFD1-205ENST00000554057 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
MTHFD1-205ENST00000554057 WIZO95785 1651 aa13.18□□□□□ -0.3
MTHFD1-205ENST00000554057 WDR62O43379 1518 aa13.17□□□□□ -0.3
MTHFD1-205ENST00000554057 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
MTHFD1-205ENST00000554057 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
MTHFD1-205ENST00000554057 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
MTHFD1-205ENST00000554057 CFTRP13569 1480 aa13.04□□□□□ -0.32
MTHFD1-205ENST00000554057 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-205ENST00000554057 URB2Q14146 1524 aaKnown RBP13□□□□□ -0.33
MTHFD1-205ENST00000554057 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
MTHFD1-205ENST00000554057 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
MTHFD1-205ENST00000554057 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
MTHFD1-205ENST00000554057 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-205ENST00000554057 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
MTHFD1-205ENST00000554057 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
MTHFD1-205ENST00000554057 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
MTHFD1-205ENST00000554057 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
MTHFD1-205ENST00000554057 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
MTHFD1-205ENST00000554057 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
MTHFD1-205ENST00000554057 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-205ENST00000554057 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
MTHFD1-205ENST00000554057 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
MTHFD1-205ENST00000554057 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
MTHFD1-205ENST00000554057 CHD1O14646 1710 aa12.73□□□□□ -0.37
MTHFD1-205ENST00000554057 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-205ENST00000554057 AQRO60306 1485 aaKnown RBP eCLIP12.71□□□□□ -0.38
MTHFD1-205ENST00000554057 POLA1P09884 1462 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-205ENST00000554057 ARAP1Q96P48 1450 aa12.67□□□□□ -0.38
MTHFD1-205ENST00000554057 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
MTHFD1-205ENST00000554057 FBLN2P98095 1184 aa12.65□□□□□ -0.38
MTHFD1-205ENST00000554057 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
MTHFD1-205ENST00000554057 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
MTHFD1-205ENST00000554057 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
MTHFD1-205ENST00000554057 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
MTHFD1-205ENST00000554057 SOGA1O94964 1423 aa12.59□□□□□ -0.39
MTHFD1-205ENST00000554057 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-205ENST00000554057 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
MTHFD1-205ENST00000554057 CUX1P39880 1505 aa12.56□□□□□ -0.4
MTHFD1-205ENST00000554057 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
MTHFD1-205ENST00000554057 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
MTHFD1-205ENST00000554057 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
MTHFD1-205ENST00000554057 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
MTHFD1-205ENST00000554057 CHMP7Q8WUX9 453 aaPredicted RBP12.51□□□□□ -0.41
MTHFD1-205ENST00000554057 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
MTHFD1-205ENST00000554057 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
MTHFD1-205ENST00000554057 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.42
MTHFD1-205ENST00000554057 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
MTHFD1-205ENST00000554057 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
MTHFD1-205ENST00000554057 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
MTHFD1-205ENST00000554057 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
MTHFD1-205ENST00000554057 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
MTHFD1-205ENST00000554057 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
MTHFD1-205ENST00000554057 NUP160Q12769 1436 aa12.33□□□□□ -0.44
MTHFD1-205ENST00000554057 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
MTHFD1-205ENST00000554057 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-205ENST00000554057 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
MTHFD1-205ENST00000554057 BIVM-ERCC5R4GMW8 1640 aa12.31□□□□□ -0.44
MTHFD1-205ENST00000554057 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
MTHFD1-205ENST00000554057 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
MTHFD1-205ENST00000554057 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
MTHFD1-205ENST00000554057 ERICH3Q5RHP9 1530 aa12.25□□□□□ -0.45
MTHFD1-205ENST00000554057 KIF13AQ9H1H9 1805 aa12.22□□□□□ -0.45
MTHFD1-205ENST00000554057 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.45
MTHFD1-205ENST00000554057 RUSC2Q8N2Y8 1516 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms