RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 NISCHQ9Y2I1 1504 aa14.65□□□□□ -0.06
AL390816.1-201ENST00000553990 ABCC9O60706 1549 aa13.33□□□□□ -0.28
AL390816.1-201ENST00000553990 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
AL390816.1-201ENST00000553990 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
AL390816.1-201ENST00000553990 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
AL390816.1-201ENST00000553990 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.41
AL390816.1-201ENST00000553990 NACADO15069 1562 aa12.42□□□□□ -0.42
AL390816.1-201ENST00000553990 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.42
AL390816.1-201ENST00000553990 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
AL390816.1-201ENST00000553990 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
AL390816.1-201ENST00000553990 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
AL390816.1-201ENST00000553990 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
AL390816.1-201ENST00000553990 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
AL390816.1-201ENST00000553990 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
AL390816.1-201ENST00000553990 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
AL390816.1-201ENST00000553990 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
AL390816.1-201ENST00000553990 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
AL390816.1-201ENST00000553990 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
AL390816.1-201ENST00000553990 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
AL390816.1-201ENST00000553990 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
AL390816.1-201ENST00000553990 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
AL390816.1-201ENST00000553990 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
AL390816.1-201ENST00000553990 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
AL390816.1-201ENST00000553990 NESP48681 1621 aa11.45□□□□□ -0.58
AL390816.1-201ENST00000553990 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
AL390816.1-201ENST00000553990 HMGXB3Q12766 1538 aa11.4□□□□□ -0.59
AL390816.1-201ENST00000553990 CUX2O14529 1486 aa11.38□□□□□ -0.59
AL390816.1-201ENST00000553990 BAZ1BQ9UIG0 1483 aaKnown RBP11.37□□□□□ -0.59
AL390816.1-201ENST00000553990 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
AL390816.1-201ENST00000553990 MROH2BQ7Z745 1585 aa11.35□□□□□ -0.59
AL390816.1-201ENST00000553990 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
AL390816.1-201ENST00000553990 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
AL390816.1-201ENST00000553990 PEG3Q9GZU2 1588 aa11.29□□□□□ -0.6
AL390816.1-201ENST00000553990 WIZO95785 1651 aa11.25□□□□□ -0.61
AL390816.1-201ENST00000553990 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
AL390816.1-201ENST00000553990 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
AL390816.1-201ENST00000553990 CADPSQ9ULU8 1353 aa11.12□□□□□ -0.63
AL390816.1-201ENST00000553990 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
AL390816.1-201ENST00000553990 WDR62O43379 1518 aa11.09□□□□□ -0.63
AL390816.1-201ENST00000553990 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
AL390816.1-201ENST00000553990 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
AL390816.1-201ENST00000553990 FANCD2Q9BXW9 1451 aa11.05□□□□□ -0.64
AL390816.1-201ENST00000553990 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
AL390816.1-201ENST00000553990 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.65
AL390816.1-201ENST00000553990 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
AL390816.1-201ENST00000553990 CFTRP13569 1480 aa10.99□□□□□ -0.65
AL390816.1-201ENST00000553990 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
AL390816.1-201ENST00000553990 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
AL390816.1-201ENST00000553990 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
AL390816.1-201ENST00000553990 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
AL390816.1-201ENST00000553990 OSCARQ8IYS5 282 aa10.84□□□□□ -0.67
AL390816.1-201ENST00000553990 RIMBP3CA6NJZ7 1639 aa10.84□□□□□ -0.67
AL390816.1-201ENST00000553990 RIMBP3BA6NNM3 1639 aa10.84□□□□□ -0.67
AL390816.1-201ENST00000553990 RIMBP3Q9UFD9 1639 aa10.84□□□□□ -0.67
AL390816.1-201ENST00000553990 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
AL390816.1-201ENST00000553990 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
AL390816.1-201ENST00000553990 CHD1O14646 1710 aa10.79□□□□□ -0.68
AL390816.1-201ENST00000553990 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
AL390816.1-201ENST00000553990 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
AL390816.1-201ENST00000553990 AQRO60306 1485 aaKnown RBP eCLIP10.76□□□□□ -0.69
AL390816.1-201ENST00000553990 ARHGEF11O15085 1522 aa10.76□□□□□ -0.69
AL390816.1-201ENST00000553990 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
AL390816.1-201ENST00000553990 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
AL390816.1-201ENST00000553990 FBLN2P98095 1184 aa10.7□□□□□ -0.7
AL390816.1-201ENST00000553990 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
AL390816.1-201ENST00000553990 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
AL390816.1-201ENST00000553990 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
AL390816.1-201ENST00000553990 FGD5Q6ZNL6 1462 aa10.67□□□□□ -0.7
AL390816.1-201ENST00000553990 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
AL390816.1-201ENST00000553990 CUX1P39880 1505 aa10.66□□□□□ -0.7
AL390816.1-201ENST00000553990 SNAPC4Q5SXM2 1469 aa10.66□□□□□ -0.7
AL390816.1-201ENST00000553990 SOGA1O94964 1423 aa10.65□□□□□ -0.7
AL390816.1-201ENST00000553990 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
AL390816.1-201ENST00000553990 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
AL390816.1-201ENST00000553990 CLASP1Q7Z460 1538 aa10.59□□□□□ -0.71
AL390816.1-201ENST00000553990 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
AL390816.1-201ENST00000553990 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
AL390816.1-201ENST00000553990 SYNJ1O43426 1573 aa10.56□□□□□ -0.72
AL390816.1-201ENST00000553990 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
AL390816.1-201ENST00000553990 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
AL390816.1-201ENST00000553990 MAGI1Q96QZ7 1491 aaPredicted RBP10.54□□□□□ -0.72
AL390816.1-201ENST00000553990 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
AL390816.1-201ENST00000553990 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
AL390816.1-201ENST00000553990 ERCC6L2Q5T890 1561 aa10.52□□□□□ -0.72
AL390816.1-201ENST00000553990 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.73
AL390816.1-201ENST00000553990 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
AL390816.1-201ENST00000553990 ADAMTS12P58397 1594 aa10.47□□□□□ -0.73
AL390816.1-201ENST00000553990 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
AL390816.1-201ENST00000553990 BIVM-ERCC5R4GMW8 1640 aa10.46□□□□□ -0.74
AL390816.1-201ENST00000553990 GRIN2AQ12879 1464 aa10.44□□□□□ -0.74
AL390816.1-201ENST00000553990 TOP2BQ02880 1626 aa10.44□□□□□ -0.74
AL390816.1-201ENST00000553990 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
AL390816.1-201ENST00000553990 NUP160Q12769 1436 aa10.38□□□□□ -0.75
AL390816.1-201ENST00000553990 SHROOM2Q13796 1616 aa10.37□□□□□ -0.75
AL390816.1-201ENST00000553990 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
AL390816.1-201ENST00000553990 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
AL390816.1-201ENST00000553990 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
AL390816.1-201ENST00000553990 KIF13AQ9H1H9 1805 aa10.33□□□□□ -0.76
AL390816.1-201ENST00000553990 PRG4Q92954 1404 aaPredicted RBP10.32□□□□□ -0.76
AL390816.1-201ENST00000553990 AEBP2Q6ZN18 517 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms