RNA–Protein interactions for RNA: ENST00000553735.1

SOCS4-203, Transcript of suppressor of cytokine signaling 4, humanhuman

TSL 5

Gene SOCS4, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-203ENST00000553735 NISCHQ9Y2I1 1504 aa44.04■■■■■ 4.64
SOCS4-203ENST00000553735 CCDC180Q9P1Z9 1646 aa39.31■■■■□ 3.88
SOCS4-203ENST00000553735 ABCC9O60706 1549 aa38.86■■■■□ 3.81
SOCS4-203ENST00000553735 RB1CC1Q8TDY2 1594 aa37.18■■■■□ 3.54
SOCS4-203ENST00000553735 NACADO15069 1562 aa37.06■■■■□ 3.52
SOCS4-203ENST00000553735 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
SOCS4-203ENST00000553735 MYO15BQ96JP2 1530 aa36.73■■■■□ 3.47
SOCS4-203ENST00000553735 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
SOCS4-203ENST00000553735 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
SOCS4-203ENST00000553735 UNC13AQ9UPW8 1703 aa36.36■■■■□ 3.41
SOCS4-203ENST00000553735 PABPN1Q86U42 306 aaKnown RBP eCLIP36.23■■■■□ 3.39
SOCS4-203ENST00000553735 BICRAQ9NZM4 1560 aa36.14■■■■□ 3.38
SOCS4-203ENST00000553735 DNAJC5BQ9UF47 199 aa36.08■■■■□ 3.37
SOCS4-203ENST00000553735 SCRIBQ14160 1630 aa35.84■■■■□ 3.33
SOCS4-203ENST00000553735 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
SOCS4-203ENST00000553735 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
SOCS4-203ENST00000553735 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
SOCS4-203ENST00000553735 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
SOCS4-203ENST00000553735 SMARCA4P51532 1647 aa34.26■■■■□ 3.07
SOCS4-203ENST00000553735 NCAPD3P42695 1498 aa34.21■■■■□ 3.07
SOCS4-203ENST00000553735 ATAD2BQ9ULI0 1458 aa34.18■■■■□ 3.06
SOCS4-203ENST00000553735 BAZ1AQ9NRL2 1556 aaPredicted RBP34.14■■■■□ 3.06
SOCS4-203ENST00000553735 SMARCA2P51531 1590 aa34.09■■■■□ 3.05
SOCS4-203ENST00000553735 HMGXB3Q12766 1538 aa34.01■■■■□ 3.04
SOCS4-203ENST00000553735 MROH2BQ7Z745 1585 aa33.94■■■■□ 3.02
SOCS4-203ENST00000553735 PEG3Q9GZU2 1588 aa33.94■■■■□ 3.02
SOCS4-203ENST00000553735 BAZ1BQ9UIG0 1483 aaKnown RBP33.85■■■■□ 3.01
SOCS4-203ENST00000553735 NESP48681 1621 aa33.53■■■□□ 2.96
SOCS4-203ENST00000553735 WIZO95785 1651 aa33.53■■■□□ 2.96
SOCS4-203ENST00000553735 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
SOCS4-203ENST00000553735 RSF1Q96T23 1441 aaPredicted RBP33.4■■■□□ 2.94
SOCS4-203ENST00000553735 LAMC3Q9Y6N6 1575 aa33.35■■■□□ 2.93
SOCS4-203ENST00000553735 CUX2O14529 1486 aa33.32■■■□□ 2.92
SOCS4-203ENST00000553735 CADPSQ9ULU8 1353 aa33.18■■■□□ 2.9
SOCS4-203ENST00000553735 TOP2AP11388 1531 aaKnown RBP33.17■■■□□ 2.9
SOCS4-203ENST00000553735 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
SOCS4-203ENST00000553735 THOC2Q8NI27 1593 aaKnown RBP33.13■■■□□ 2.89
SOCS4-203ENST00000553735 KIF21AQ7Z4S6 1674 aa33.1■■■□□ 2.89
SOCS4-203ENST00000553735 CFTRP13569 1480 aa32.92■■■□□ 2.86
SOCS4-203ENST00000553735 MRC2Q9UBG0 1479 aa32.85■■■□□ 2.85
SOCS4-203ENST00000553735 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
SOCS4-203ENST00000553735 CEP164Q9UPV0 1460 aa32.8■■■□□ 2.84
SOCS4-203ENST00000553735 DNAJC5Q9H3Z4 198 aa32.77■■■□□ 2.84
SOCS4-203ENST00000553735 CCDC88BA6NC98 1476 aa32.77■■■□□ 2.84
SOCS4-203ENST00000553735 WDR62O43379 1518 aa32.77■■■□□ 2.84
SOCS4-203ENST00000553735 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
SOCS4-203ENST00000553735 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
SOCS4-203ENST00000553735 TOPBP1Q92547 1522 aa32.25■■■□□ 2.75
SOCS4-203ENST00000553735 ABCC8Q09428 1581 aa32.17■■■□□ 2.74
SOCS4-203ENST00000553735 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
SOCS4-203ENST00000553735 DNMBPQ6XZF7 1577 aa32.16■■■□□ 2.74
SOCS4-203ENST00000553735 IFT140Q96RY7 1462 aa32.13■■■□□ 2.73
SOCS4-203ENST00000553735 ZNF608Q9ULD9 1512 aaPredicted RBP32.05■■■□□ 2.72
SOCS4-203ENST00000553735 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.7
SOCS4-203ENST00000553735 TARBP1Q13395 1621 aaKnown RBP31.93■■■□□ 2.7
SOCS4-203ENST00000553735 EIF4G3O43432 1585 aaKnown RBP31.89■■■□□ 2.7
SOCS4-203ENST00000553735 CUX1P39880 1505 aa31.87■■■□□ 2.69
SOCS4-203ENST00000553735 OSCARQ8IYS5 282 aa31.82■■■□□ 2.68
SOCS4-203ENST00000553735 RAD54L2Q9Y4B4 1467 aa31.82■■■□□ 2.68
SOCS4-203ENST00000553735 FGD5Q6ZNL6 1462 aa31.81■■■□□ 2.68
SOCS4-203ENST00000553735 AQRO60306 1485 aaKnown RBP eCLIP31.79■■■□□ 2.68
SOCS4-203ENST00000553735 SOGA1O94964 1423 aa31.77■■■□□ 2.68
SOCS4-203ENST00000553735 TDRD9Q8NDG6 1382 aaKnown RBP31.67■■■□□ 2.66
SOCS4-203ENST00000553735 WDR97A6NE52 1622 aa31.64■■■□□ 2.65
SOCS4-203ENST00000553735 CHD1O14646 1710 aa31.55■■■□□ 2.64
SOCS4-203ENST00000553735 SNAPC4Q5SXM2 1469 aa31.5■■■□□ 2.63
SOCS4-203ENST00000553735 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
SOCS4-203ENST00000553735 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
SOCS4-203ENST00000553735 TRIM41Q8WV44 630 aa31.47■■■□□ 2.63
SOCS4-203ENST00000553735 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
SOCS4-203ENST00000553735 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
SOCS4-203ENST00000553735 TOP2BQ02880 1626 aa31.46■■■□□ 2.63
SOCS4-203ENST00000553735 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
SOCS4-203ENST00000553735 FBLN2P98095 1184 aa31.43■■■□□ 2.62
SOCS4-203ENST00000553735 MAGI1Q96QZ7 1491 aaPredicted RBP31.43■■■□□ 2.62
SOCS4-203ENST00000553735 GAPVD1Q14C86 1478 aa31.41■■■□□ 2.62
SOCS4-203ENST00000553735 RIMBP3CA6NJZ7 1639 aa31.41■■■□□ 2.62
SOCS4-203ENST00000553735 RIMBP3BA6NNM3 1639 aa31.41■■■□□ 2.62
SOCS4-203ENST00000553735 ABCA5Q8WWZ7 1642 aa31.41■■■□□ 2.62
SOCS4-203ENST00000553735 RIMBP3Q9UFD9 1639 aa31.41■■■□□ 2.62
SOCS4-203ENST00000553735 PBRM1Q86U86 1689 aa31.37■■■□□ 2.61
SOCS4-203ENST00000553735 ARHGEF11O15085 1522 aa31.36■■■□□ 2.61
SOCS4-203ENST00000553735 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
SOCS4-203ENST00000553735 CHMP7Q8WUX9 453 aaPredicted RBP31.28■■■□□ 2.6
SOCS4-203ENST00000553735 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
SOCS4-203ENST00000553735 ADAMTS12P58397 1594 aa31.13■■■□□ 2.57
SOCS4-203ENST00000553735 ARAP1Q96P48 1450 aa31.1■■■□□ 2.57
SOCS4-203ENST00000553735 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
SOCS4-203ENST00000553735 GRIN2AQ12879 1464 aa31.08■■■□□ 2.57
SOCS4-203ENST00000553735 CYB5RLQ6IPT4 315 aa31.05■■■□□ 2.56
SOCS4-203ENST00000553735 FHAD1B1AJZ9 1412 aa31.04■■■□□ 2.56
SOCS4-203ENST00000553735 NUP160Q12769 1436 aa30.98■■■□□ 2.55
SOCS4-203ENST00000553735 CEP170Q5SW79 1584 aa30.95■■■□□ 2.54
SOCS4-203ENST00000553735 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
SOCS4-203ENST00000553735 IGF1RP08069 1367 aa30.79■■■□□ 2.52
SOCS4-203ENST00000553735 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
SOCS4-203ENST00000553735 SHROOM2Q13796 1616 aa30.78■■■□□ 2.52
SOCS4-203ENST00000553735 CUL7Q14999 1698 aa30.71■■■□□ 2.51
SOCS4-203ENST00000553735 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
SOCS4-203ENST00000553735 PRG4Q92954 1404 aaPredicted RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms