RNA–Protein interactions for RNA: ENST00000553678.1

AL049775.3-201, humanhuman

TSL 3 BASIC

Gene AL049775.3, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049775.3-201ENST00000553678 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
AL049775.3-201ENST00000553678 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
AL049775.3-201ENST00000553678 ABCC9O60706 1549 aa24.15■■□□□ 1.46
AL049775.3-201ENST00000553678 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
AL049775.3-201ENST00000553678 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
AL049775.3-201ENST00000553678 NACADO15069 1562 aa22.87■■□□□ 1.25
AL049775.3-201ENST00000553678 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
AL049775.3-201ENST00000553678 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
AL049775.3-201ENST00000553678 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
AL049775.3-201ENST00000553678 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
AL049775.3-201ENST00000553678 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
AL049775.3-201ENST00000553678 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
AL049775.3-201ENST00000553678 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
AL049775.3-201ENST00000553678 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
AL049775.3-201ENST00000553678 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
AL049775.3-201ENST00000553678 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
AL049775.3-201ENST00000553678 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
AL049775.3-201ENST00000553678 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
AL049775.3-201ENST00000553678 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
AL049775.3-201ENST00000553678 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
AL049775.3-201ENST00000553678 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
AL049775.3-201ENST00000553678 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
AL049775.3-201ENST00000553678 BAZ1AQ9NRL2 1556 aaPredicted RBP21.07■□□□□ 0.96
AL049775.3-201ENST00000553678 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
AL049775.3-201ENST00000553678 HMGXB3Q12766 1538 aa21■□□□□ 0.95
AL049775.3-201ENST00000553678 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
AL049775.3-201ENST00000553678 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
AL049775.3-201ENST00000553678 NESP48681 1621 aa20.88■□□□□ 0.93
AL049775.3-201ENST00000553678 WIZO95785 1651 aa20.86■□□□□ 0.93
AL049775.3-201ENST00000553678 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
AL049775.3-201ENST00000553678 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
AL049775.3-201ENST00000553678 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
AL049775.3-201ENST00000553678 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
AL049775.3-201ENST00000553678 CUX2O14529 1486 aa20.56■□□□□ 0.88
AL049775.3-201ENST00000553678 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
AL049775.3-201ENST00000553678 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
AL049775.3-201ENST00000553678 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
AL049775.3-201ENST00000553678 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
AL049775.3-201ENST00000553678 CFTRP13569 1480 aa20.36■□□□□ 0.85
AL049775.3-201ENST00000553678 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
AL049775.3-201ENST00000553678 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
AL049775.3-201ENST00000553678 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
AL049775.3-201ENST00000553678 DNAJC5Q9H3Z4 198 aa20.3■□□□□ 0.84
AL049775.3-201ENST00000553678 WDR62O43379 1518 aa20.27■□□□□ 0.84
AL049775.3-201ENST00000553678 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
AL049775.3-201ENST00000553678 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
AL049775.3-201ENST00000553678 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
AL049775.3-201ENST00000553678 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
AL049775.3-201ENST00000553678 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
AL049775.3-201ENST00000553678 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
AL049775.3-201ENST00000553678 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
AL049775.3-201ENST00000553678 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
AL049775.3-201ENST00000553678 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
AL049775.3-201ENST00000553678 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
AL049775.3-201ENST00000553678 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
AL049775.3-201ENST00000553678 CUX1P39880 1505 aa19.78■□□□□ 0.76
AL049775.3-201ENST00000553678 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
AL049775.3-201ENST00000553678 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
AL049775.3-201ENST00000553678 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
AL049775.3-201ENST00000553678 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
AL049775.3-201ENST00000553678 SOGA1O94964 1423 aa19.67■□□□□ 0.74
AL049775.3-201ENST00000553678 TDRD9Q8NDG6 1382 aaKnown RBP19.66■□□□□ 0.74
AL049775.3-201ENST00000553678 OSCARQ8IYS5 282 aa19.65■□□□□ 0.74
AL049775.3-201ENST00000553678 CHD1O14646 1710 aa19.6■□□□□ 0.73
AL049775.3-201ENST00000553678 WDR97A6NE52 1622 aa19.59■□□□□ 0.73
AL049775.3-201ENST00000553678 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
AL049775.3-201ENST00000553678 SYNJ1O43426 1573 aa19.54■□□□□ 0.72
AL049775.3-201ENST00000553678 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
AL049775.3-201ENST00000553678 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
AL049775.3-201ENST00000553678 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
AL049775.3-201ENST00000553678 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
AL049775.3-201ENST00000553678 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
AL049775.3-201ENST00000553678 FBLN2P98095 1184 aa19.47■□□□□ 0.71
AL049775.3-201ENST00000553678 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
AL049775.3-201ENST00000553678 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
AL049775.3-201ENST00000553678 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
AL049775.3-201ENST00000553678 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
AL049775.3-201ENST00000553678 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
AL049775.3-201ENST00000553678 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
AL049775.3-201ENST00000553678 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
AL049775.3-201ENST00000553678 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
AL049775.3-201ENST00000553678 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.69
AL049775.3-201ENST00000553678 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
AL049775.3-201ENST00000553678 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
AL049775.3-201ENST00000553678 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
AL049775.3-201ENST00000553678 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
AL049775.3-201ENST00000553678 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
AL049775.3-201ENST00000553678 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
AL049775.3-201ENST00000553678 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
AL049775.3-201ENST00000553678 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
AL049775.3-201ENST00000553678 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
AL049775.3-201ENST00000553678 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
AL049775.3-201ENST00000553678 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
AL049775.3-201ENST00000553678 NUP160Q12769 1436 aa19.16■□□□□ 0.66
AL049775.3-201ENST00000553678 IGF1RP08069 1367 aa19.07■□□□□ 0.64
AL049775.3-201ENST00000553678 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
AL049775.3-201ENST00000553678 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
AL049775.3-201ENST00000553678 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
AL049775.3-201ENST00000553678 CUL7Q14999 1698 aa18.95■□□□□ 0.62
AL049775.3-201ENST00000553678 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms