RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
CHD8-205ENST00000553651 ABCC9O60706 1549 aa23.08■■□□□ 1.29
CHD8-205ENST00000553651 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.22
CHD8-205ENST00000553651 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
CHD8-205ENST00000553651 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
CHD8-205ENST00000553651 NACADO15069 1562 aa21.51■■□□□ 1.03
CHD8-205ENST00000553651 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
CHD8-205ENST00000553651 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
CHD8-205ENST00000553651 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
CHD8-205ENST00000553651 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
CHD8-205ENST00000553651 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
CHD8-205ENST00000553651 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
CHD8-205ENST00000553651 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
CHD8-205ENST00000553651 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
CHD8-205ENST00000553651 EIF4G1Q04637 1599 aaKnown RBP20.69■□□□□ 0.9
CHD8-205ENST00000553651 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
CHD8-205ENST00000553651 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
CHD8-205ENST00000553651 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
CHD8-205ENST00000553651 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
CHD8-205ENST00000553651 CUX2O14529 1486 aa20.09■□□□□ 0.81
CHD8-205ENST00000553651 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
CHD8-205ENST00000553651 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
CHD8-205ENST00000553651 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
CHD8-205ENST00000553651 NESP48681 1621 aa19.73■□□□□ 0.75
CHD8-205ENST00000553651 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
CHD8-205ENST00000553651 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
CHD8-205ENST00000553651 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
CHD8-205ENST00000553651 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
CHD8-205ENST00000553651 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
CHD8-205ENST00000553651 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
CHD8-205ENST00000553651 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
CHD8-205ENST00000553651 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
CHD8-205ENST00000553651 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
CHD8-205ENST00000553651 BAZ1AQ9NRL2 1556 aaPredicted RBP19.42■□□□□ 0.7
CHD8-205ENST00000553651 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
CHD8-205ENST00000553651 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
CHD8-205ENST00000553651 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
CHD8-205ENST00000553651 WDR62O43379 1518 aa19.25■□□□□ 0.67
CHD8-205ENST00000553651 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
CHD8-205ENST00000553651 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
CHD8-205ENST00000553651 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
CHD8-205ENST00000553651 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
CHD8-205ENST00000553651 WIZO95785 1651 aa19.01■□□□□ 0.63
CHD8-205ENST00000553651 CFTRP13569 1480 aa18.96■□□□□ 0.63
CHD8-205ENST00000553651 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
CHD8-205ENST00000553651 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
CHD8-205ENST00000553651 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
CHD8-205ENST00000553651 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
CHD8-205ENST00000553651 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
CHD8-205ENST00000553651 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.6
CHD8-205ENST00000553651 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
CHD8-205ENST00000553651 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
CHD8-205ENST00000553651 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
CHD8-205ENST00000553651 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
CHD8-205ENST00000553651 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
CHD8-205ENST00000553651 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
CHD8-205ENST00000553651 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
CHD8-205ENST00000553651 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
CHD8-205ENST00000553651 CHD1O14646 1710 aa18.55■□□□□ 0.56
CHD8-205ENST00000553651 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
CHD8-205ENST00000553651 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.56
CHD8-205ENST00000553651 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.55
CHD8-205ENST00000553651 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
CHD8-205ENST00000553651 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
CHD8-205ENST00000553651 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
CHD8-205ENST00000553651 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
CHD8-205ENST00000553651 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
CHD8-205ENST00000553651 FBLN2P98095 1184 aa18.38■□□□□ 0.53
CHD8-205ENST00000553651 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
CHD8-205ENST00000553651 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
CHD8-205ENST00000553651 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
CHD8-205ENST00000553651 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
CHD8-205ENST00000553651 SOGA1O94964 1423 aa18.28■□□□□ 0.52
CHD8-205ENST00000553651 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
CHD8-205ENST00000553651 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
CHD8-205ENST00000553651 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
CHD8-205ENST00000553651 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.51
CHD8-205ENST00000553651 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
CHD8-205ENST00000553651 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
CHD8-205ENST00000553651 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
CHD8-205ENST00000553651 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
CHD8-205ENST00000553651 CUX1P39880 1505 aa18.16■□□□□ 0.5
CHD8-205ENST00000553651 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
CHD8-205ENST00000553651 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
CHD8-205ENST00000553651 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
CHD8-205ENST00000553651 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
CHD8-205ENST00000553651 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
CHD8-205ENST00000553651 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
CHD8-205ENST00000553651 NUP160Q12769 1436 aa17.95■□□□□ 0.46
CHD8-205ENST00000553651 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
CHD8-205ENST00000553651 SHROOM2Q13796 1616 aa17.93■□□□□ 0.46
CHD8-205ENST00000553651 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
CHD8-205ENST00000553651 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
CHD8-205ENST00000553651 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
CHD8-205ENST00000553651 ABCC10Q5T3U5 1492 aa17.77■□□□□ 0.44
CHD8-205ENST00000553651 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.44
CHD8-205ENST00000553651 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
CHD8-205ENST00000553651 KDM4FA0A1W2PPD8 638 aa17.73■□□□□ 0.43
CHD8-205ENST00000553651 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
CHD8-205ENST00000553651 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms