RNA–Protein interactions for RNA: ENST00000553559.1

SNHG10-202, Transcript of small nucleolar RNA host gene 10, humanhuman

TSL 3

Gene SNHG10, Length 428 nt, Biotype antisense RNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG10-202ENST00000553559 NISCHQ9Y2I1 1504 aa32.24■■■□□ 2.75
SNHG10-202ENST00000553559 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
SNHG10-202ENST00000553559 ABCC9O60706 1549 aa28.18■■■□□ 2.1
SNHG10-202ENST00000553559 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
SNHG10-202ENST00000553559 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
SNHG10-202ENST00000553559 NACADO15069 1562 aa27.04■■□□□ 1.92
SNHG10-202ENST00000553559 ZCCHC6Q5VYS8 1495 aaKnown RBP26.84■■□□□ 1.89
SNHG10-202ENST00000553559 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
SNHG10-202ENST00000553559 DCAF1Q9Y4B6 1507 aa26.68■■□□□ 1.86
SNHG10-202ENST00000553559 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
SNHG10-202ENST00000553559 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
SNHG10-202ENST00000553559 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
SNHG10-202ENST00000553559 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
SNHG10-202ENST00000553559 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
SNHG10-202ENST00000553559 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
SNHG10-202ENST00000553559 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
SNHG10-202ENST00000553559 CC2D2AQ9P2K1 1620 aa25.47■■□□□ 1.67
SNHG10-202ENST00000553559 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
SNHG10-202ENST00000553559 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
SNHG10-202ENST00000553559 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
SNHG10-202ENST00000553559 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
SNHG10-202ENST00000553559 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
SNHG10-202ENST00000553559 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
SNHG10-202ENST00000553559 MROH2BQ7Z745 1585 aa24.82■■□□□ 1.56
SNHG10-202ENST00000553559 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
SNHG10-202ENST00000553559 PEG3Q9GZU2 1588 aa24.78■■□□□ 1.56
SNHG10-202ENST00000553559 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
SNHG10-202ENST00000553559 WIZO95785 1651 aa24.55■■□□□ 1.52
SNHG10-202ENST00000553559 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
SNHG10-202ENST00000553559 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
SNHG10-202ENST00000553559 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
SNHG10-202ENST00000553559 NESP48681 1621 aa24.32■■□□□ 1.48
SNHG10-202ENST00000553559 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
SNHG10-202ENST00000553559 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
SNHG10-202ENST00000553559 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
SNHG10-202ENST00000553559 CUX2O14529 1486 aa24.11■■□□□ 1.45
SNHG10-202ENST00000553559 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
SNHG10-202ENST00000553559 CFTRP13569 1480 aa24.03■■□□□ 1.44
SNHG10-202ENST00000553559 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
SNHG10-202ENST00000553559 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
SNHG10-202ENST00000553559 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
SNHG10-202ENST00000553559 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
SNHG10-202ENST00000553559 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
SNHG10-202ENST00000553559 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
SNHG10-202ENST00000553559 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
SNHG10-202ENST00000553559 WDR62O43379 1518 aa23.81■■□□□ 1.4
SNHG10-202ENST00000553559 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
SNHG10-202ENST00000553559 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
SNHG10-202ENST00000553559 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
SNHG10-202ENST00000553559 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
SNHG10-202ENST00000553559 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
SNHG10-202ENST00000553559 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
SNHG10-202ENST00000553559 POLA1P09884 1462 aaPredicted RBP23.32■■□□□ 1.32
SNHG10-202ENST00000553559 CUX1P39880 1505 aa23.29■■□□□ 1.32
SNHG10-202ENST00000553559 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
SNHG10-202ENST00000553559 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
SNHG10-202ENST00000553559 SOGA1O94964 1423 aa23.25■■□□□ 1.31
SNHG10-202ENST00000553559 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
SNHG10-202ENST00000553559 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
SNHG10-202ENST00000553559 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
SNHG10-202ENST00000553559 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
SNHG10-202ENST00000553559 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNHG10-202ENST00000553559 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
SNHG10-202ENST00000553559 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
SNHG10-202ENST00000553559 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
SNHG10-202ENST00000553559 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
SNHG10-202ENST00000553559 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.29
SNHG10-202ENST00000553559 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
SNHG10-202ENST00000553559 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
SNHG10-202ENST00000553559 GRIN2BQ13224 1484 aa23■■□□□ 1.27
SNHG10-202ENST00000553559 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
SNHG10-202ENST00000553559 FBLN2P98095 1184 aa22.97■■□□□ 1.27
SNHG10-202ENST00000553559 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
SNHG10-202ENST00000553559 MAGI1Q96QZ7 1491 aaPredicted RBP22.95■■□□□ 1.26
SNHG10-202ENST00000553559 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
SNHG10-202ENST00000553559 CHD1O14646 1710 aa22.91■■□□□ 1.26
SNHG10-202ENST00000553559 PBRM1Q86U86 1689 aa22.91■■□□□ 1.26
SNHG10-202ENST00000553559 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
SNHG10-202ENST00000553559 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
SNHG10-202ENST00000553559 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
SNHG10-202ENST00000553559 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
SNHG10-202ENST00000553559 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
SNHG10-202ENST00000553559 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
SNHG10-202ENST00000553559 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
SNHG10-202ENST00000553559 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
SNHG10-202ENST00000553559 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
SNHG10-202ENST00000553559 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
SNHG10-202ENST00000553559 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
SNHG10-202ENST00000553559 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
SNHG10-202ENST00000553559 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
SNHG10-202ENST00000553559 NUP160Q12769 1436 aa22.57■■□□□ 1.2
SNHG10-202ENST00000553559 CUL7Q14999 1698 aa22.57■■□□□ 1.2
SNHG10-202ENST00000553559 IGF1RP08069 1367 aa22.56■■□□□ 1.2
SNHG10-202ENST00000553559 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
SNHG10-202ENST00000553559 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
SNHG10-202ENST00000553559 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
SNHG10-202ENST00000553559 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
SNHG10-202ENST00000553559 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
SNHG10-202ENST00000553559 SHROOM2Q13796 1616 aa22.39■■□□□ 1.18
SNHG10-202ENST00000553559 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms