RNA–Protein interactions for RNA: ENST00000553538.5

KLHDC2-202, Transcript of kelch domain containing 2, humanhuman

TSL 5

Gene KLHDC2, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-202ENST00000553538 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
KLHDC2-202ENST00000553538 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
KLHDC2-202ENST00000553538 ABCC9O60706 1549 aa29.71■■■□□ 2.35
KLHDC2-202ENST00000553538 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
KLHDC2-202ENST00000553538 NACADO15069 1562 aa28.22■■■□□ 2.11
KLHDC2-202ENST00000553538 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
KLHDC2-202ENST00000553538 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
KLHDC2-202ENST00000553538 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
KLHDC2-202ENST00000553538 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
KLHDC2-202ENST00000553538 DNAJC5BQ9UF47 199 aa27.63■■■□□ 2.01
KLHDC2-202ENST00000553538 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
KLHDC2-202ENST00000553538 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
KLHDC2-202ENST00000553538 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
KLHDC2-202ENST00000553538 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
KLHDC2-202ENST00000553538 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
KLHDC2-202ENST00000553538 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
KLHDC2-202ENST00000553538 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
KLHDC2-202ENST00000553538 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
KLHDC2-202ENST00000553538 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
KLHDC2-202ENST00000553538 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
KLHDC2-202ENST00000553538 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
KLHDC2-202ENST00000553538 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
KLHDC2-202ENST00000553538 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
KLHDC2-202ENST00000553538 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
KLHDC2-202ENST00000553538 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
KLHDC2-202ENST00000553538 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
KLHDC2-202ENST00000553538 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
KLHDC2-202ENST00000553538 NESP48681 1621 aa25.61■■□□□ 1.69
KLHDC2-202ENST00000553538 ERCC6Q03468 1493 aa25.59■■□□□ 1.69
KLHDC2-202ENST00000553538 WIZO95785 1651 aa25.55■■□□□ 1.68
KLHDC2-202ENST00000553538 CUX2O14529 1486 aa25.49■■□□□ 1.67
KLHDC2-202ENST00000553538 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.66
KLHDC2-202ENST00000553538 KIF21AQ7Z4S6 1674 aa25.42■■□□□ 1.66
KLHDC2-202ENST00000553538 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
KLHDC2-202ENST00000553538 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
KLHDC2-202ENST00000553538 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
KLHDC2-202ENST00000553538 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
KLHDC2-202ENST00000553538 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
KLHDC2-202ENST00000553538 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
KLHDC2-202ENST00000553538 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
KLHDC2-202ENST00000553538 WDR62O43379 1518 aa25.03■■□□□ 1.6
KLHDC2-202ENST00000553538 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
KLHDC2-202ENST00000553538 CFTRP13569 1480 aa24.99■■□□□ 1.59
KLHDC2-202ENST00000553538 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
KLHDC2-202ENST00000553538 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
KLHDC2-202ENST00000553538 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
KLHDC2-202ENST00000553538 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
KLHDC2-202ENST00000553538 TOPBP1Q92547 1522 aa24.55■■□□□ 1.52
KLHDC2-202ENST00000553538 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
KLHDC2-202ENST00000553538 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.5
KLHDC2-202ENST00000553538 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
KLHDC2-202ENST00000553538 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
KLHDC2-202ENST00000553538 ABCC8Q09428 1581 aa24.41■■□□□ 1.5
KLHDC2-202ENST00000553538 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
KLHDC2-202ENST00000553538 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
KLHDC2-202ENST00000553538 CHD1O14646 1710 aa24.24■■□□□ 1.47
KLHDC2-202ENST00000553538 CUX1P39880 1505 aa24.23■■□□□ 1.47
KLHDC2-202ENST00000553538 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
KLHDC2-202ENST00000553538 RAD54L2Q9Y4B4 1467 aa24.2■■□□□ 1.47
KLHDC2-202ENST00000553538 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
KLHDC2-202ENST00000553538 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
KLHDC2-202ENST00000553538 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
KLHDC2-202ENST00000553538 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
KLHDC2-202ENST00000553538 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
KLHDC2-202ENST00000553538 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
KLHDC2-202ENST00000553538 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
KLHDC2-202ENST00000553538 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
KLHDC2-202ENST00000553538 SOGA1O94964 1423 aa24.1■■□□□ 1.45
KLHDC2-202ENST00000553538 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
KLHDC2-202ENST00000553538 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
KLHDC2-202ENST00000553538 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
KLHDC2-202ENST00000553538 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
KLHDC2-202ENST00000553538 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.43
KLHDC2-202ENST00000553538 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.43
KLHDC2-202ENST00000553538 MAGI1Q96QZ7 1491 aaPredicted RBP23.92■■□□□ 1.42
KLHDC2-202ENST00000553538 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
KLHDC2-202ENST00000553538 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
KLHDC2-202ENST00000553538 ABCA10Q8WWZ4 1543 aa23.9■■□□□ 1.42
KLHDC2-202ENST00000553538 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
KLHDC2-202ENST00000553538 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.41
KLHDC2-202ENST00000553538 FBLN2P98095 1184 aa23.88■■□□□ 1.41
KLHDC2-202ENST00000553538 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
KLHDC2-202ENST00000553538 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
KLHDC2-202ENST00000553538 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
KLHDC2-202ENST00000553538 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
KLHDC2-202ENST00000553538 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
KLHDC2-202ENST00000553538 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
KLHDC2-202ENST00000553538 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
KLHDC2-202ENST00000553538 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
KLHDC2-202ENST00000553538 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
KLHDC2-202ENST00000553538 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
KLHDC2-202ENST00000553538 NUP160Q12769 1436 aa23.55■■□□□ 1.36
KLHDC2-202ENST00000553538 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
KLHDC2-202ENST00000553538 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
KLHDC2-202ENST00000553538 SHROOM2Q13796 1616 aa23.52■■□□□ 1.36
KLHDC2-202ENST00000553538 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
KLHDC2-202ENST00000553538 CUL7Q14999 1698 aa23.37■■□□□ 1.33
KLHDC2-202ENST00000553538 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
KLHDC2-202ENST00000553538 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
KLHDC2-202ENST00000553538 IGF1RP08069 1367 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms