RNA–Protein interactions for RNA: ENST00000553497.1

SUSD6-202, Transcript of sushi domain containing 6, humanhuman

TSL 3

Gene SUSD6, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-202ENST00000553497 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
SUSD6-202ENST00000553497 ABCC9O60706 1549 aa40.65■■■■■ 4.1
SUSD6-202ENST00000553497 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
SUSD6-202ENST00000553497 RB1CC1Q8TDY2 1594 aa38.59■■■■□ 3.77
SUSD6-202ENST00000553497 DNAJC5BQ9UF47 199 aa38.38■■■■□ 3.73
SUSD6-202ENST00000553497 NACADO15069 1562 aa38.25■■■■□ 3.71
SUSD6-202ENST00000553497 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
SUSD6-202ENST00000553497 UNC13AQ9UPW8 1703 aa37.85■■■■□ 3.65
SUSD6-202ENST00000553497 PABPN1Q86U42 306 aaKnown RBP eCLIP37.76■■■■□ 3.64
SUSD6-202ENST00000553497 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
SUSD6-202ENST00000553497 BICRAQ9NZM4 1560 aa37.53■■■■□ 3.6
SUSD6-202ENST00000553497 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
SUSD6-202ENST00000553497 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
SUSD6-202ENST00000553497 SHROOM4Q9ULL8 1493 aa36.92■■■■□ 3.5
SUSD6-202ENST00000553497 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
SUSD6-202ENST00000553497 CC2D2AQ9P2K1 1620 aa36.75■■■■□ 3.47
SUSD6-202ENST00000553497 CECR2Q9BXF3 1484 aa36.64■■■■□ 3.46
SUSD6-202ENST00000553497 EIF4G1Q04637 1599 aaKnown RBP36.6■■■■□ 3.45
SUSD6-202ENST00000553497 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
SUSD6-202ENST00000553497 NCAPD3P42695 1498 aa35.29■■■■□ 3.24
SUSD6-202ENST00000553497 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
SUSD6-202ENST00000553497 CUX2O14529 1486 aa35.15■■■■□ 3.22
SUSD6-202ENST00000553497 SMARCA4P51532 1647 aa35.1■■■■□ 3.21
SUSD6-202ENST00000553497 ERCC6Q03468 1493 aa35.09■■■■□ 3.21
SUSD6-202ENST00000553497 SMARCA2P51531 1590 aa35.04■■■■□ 3.2
SUSD6-202ENST00000553497 HMGXB3Q12766 1538 aa35.04■■■■□ 3.2
SUSD6-202ENST00000553497 NESP48681 1621 aa34.87■■■■□ 3.17
SUSD6-202ENST00000553497 BAZ1AQ9NRL2 1556 aaPredicted RBP34.84■■■■□ 3.17
SUSD6-202ENST00000553497 BAZ1BQ9UIG0 1483 aaKnown RBP34.79■■■■□ 3.16
SUSD6-202ENST00000553497 PEG3Q9GZU2 1588 aa34.75■■■■□ 3.15
SUSD6-202ENST00000553497 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
SUSD6-202ENST00000553497 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
SUSD6-202ENST00000553497 LAMC3Q9Y6N6 1575 aa34.58■■■■□ 3.13
SUSD6-202ENST00000553497 KIF21AQ7Z4S6 1674 aa34.47■■■■□ 3.11
SUSD6-202ENST00000553497 PDS5BQ9NTI5 1447 aa34.33■■■■□ 3.09
SUSD6-202ENST00000553497 WIZO95785 1651 aa34.19■■■■□ 3.06
SUSD6-202ENST00000553497 CADPSQ9ULU8 1353 aa34.19■■■■□ 3.06
SUSD6-202ENST00000553497 MRC2Q9UBG0 1479 aa34.08■■■■□ 3.05
SUSD6-202ENST00000553497 WDR62O43379 1518 aa34.04■■■■□ 3.04
SUSD6-202ENST00000553497 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
SUSD6-202ENST00000553497 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3.01
SUSD6-202ENST00000553497 CFTRP13569 1480 aa33.76■■■■□ 3
SUSD6-202ENST00000553497 TRIM41Q8WV44 630 aa33.73■■■□□ 2.99
SUSD6-202ENST00000553497 RSF1Q96T23 1441 aaPredicted RBP33.72■■■□□ 2.99
SUSD6-202ENST00000553497 TOP2AP11388 1531 aaKnown RBP33.7■■■□□ 2.99
SUSD6-202ENST00000553497 URB2Q14146 1524 aaKnown RBP33.59■■■□□ 2.97
SUSD6-202ENST00000553497 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
SUSD6-202ENST00000553497 OSCARQ8IYS5 282 aa33.43■■■□□ 2.94
SUSD6-202ENST00000553497 CCDC88BA6NC98 1476 aa33.31■■■□□ 2.92
SUSD6-202ENST00000553497 ZNF608Q9ULD9 1512 aaPredicted RBP33.22■■■□□ 2.91
SUSD6-202ENST00000553497 IFT140Q96RY7 1462 aa33.21■■■□□ 2.91
SUSD6-202ENST00000553497 TOPBP1Q92547 1522 aa33.18■■■□□ 2.9
SUSD6-202ENST00000553497 RIMBP3CA6NJZ7 1639 aa33.16■■■□□ 2.9
SUSD6-202ENST00000553497 RIMBP3BA6NNM3 1639 aa33.16■■■□□ 2.9
SUSD6-202ENST00000553497 RIMBP3Q9UFD9 1639 aa33.16■■■□□ 2.9
SUSD6-202ENST00000553497 EIF4G3O43432 1585 aaKnown RBP33.06■■■□□ 2.88
SUSD6-202ENST00000553497 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
SUSD6-202ENST00000553497 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
SUSD6-202ENST00000553497 ARHGEF11O15085 1522 aa32.98■■■□□ 2.87
SUSD6-202ENST00000553497 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.86
SUSD6-202ENST00000553497 CHD1O14646 1710 aa32.91■■■□□ 2.86
SUSD6-202ENST00000553497 AQRO60306 1485 aaKnown RBP eCLIP32.86■■■□□ 2.85
SUSD6-202ENST00000553497 POLA1P09884 1462 aaPredicted RBP32.81■■■□□ 2.84
SUSD6-202ENST00000553497 RAD54L2Q9Y4B4 1467 aa32.69■■■□□ 2.82
SUSD6-202ENST00000553497 CYB5RLQ6IPT4 315 aa32.68■■■□□ 2.82
SUSD6-202ENST00000553497 FBLN2P98095 1184 aa32.64■■■□□ 2.82
SUSD6-202ENST00000553497 ARAP1Q96P48 1450 aa32.64■■■□□ 2.82
SUSD6-202ENST00000553497 SOGA1O94964 1423 aa32.62■■■□□ 2.81
SUSD6-202ENST00000553497 TDRD9Q8NDG6 1382 aaKnown RBP32.58■■■□□ 2.81
SUSD6-202ENST00000553497 FGD5Q6ZNL6 1462 aa32.56■■■□□ 2.8
SUSD6-202ENST00000553497 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
SUSD6-202ENST00000553497 SNAPC4Q5SXM2 1469 aa32.53■■■□□ 2.8
SUSD6-202ENST00000553497 CUX1P39880 1505 aa32.51■■■□□ 2.8
SUSD6-202ENST00000553497 CLASP1Q7Z460 1538 aa32.47■■■□□ 2.79
SUSD6-202ENST00000553497 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
SUSD6-202ENST00000553497 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
SUSD6-202ENST00000553497 TRHP20396 242 aaPredicted RBP32.39■■■□□ 2.78
SUSD6-202ENST00000553497 GRIN2BQ13224 1484 aa32.38■■■□□ 2.77
SUSD6-202ENST00000553497 CHMP7Q8WUX9 453 aaPredicted RBP32.35■■■□□ 2.77
SUSD6-202ENST00000553497 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
SUSD6-202ENST00000553497 SYNJ2O15056 1496 aa32.32■■■□□ 2.76
SUSD6-202ENST00000553497 GAPVD1Q14C86 1478 aa32.23■■■□□ 2.75
SUSD6-202ENST00000553497 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
SUSD6-202ENST00000553497 ABCA10Q8WWZ4 1543 aa32.18■■■□□ 2.74
SUSD6-202ENST00000553497 GRIN2AQ12879 1464 aa31.98■■■□□ 2.71
SUSD6-202ENST00000553497 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
SUSD6-202ENST00000553497 ADAMTS12P58397 1594 aa31.97■■■□□ 2.71
SUSD6-202ENST00000553497 ERCC6L2Q5T890 1561 aa31.96■■■□□ 2.71
SUSD6-202ENST00000553497 BIVM-ERCC5R4GMW8 1640 aa31.96■■■□□ 2.71
SUSD6-202ENST00000553497 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.71
SUSD6-202ENST00000553497 CEP170Q5SW79 1584 aa31.93■■■□□ 2.7
SUSD6-202ENST00000553497 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
SUSD6-202ENST00000553497 NUP160Q12769 1436 aa31.89■■■□□ 2.7
SUSD6-202ENST00000553497 SHROOM2Q13796 1616 aa31.84■■■□□ 2.69
SUSD6-202ENST00000553497 FHAD1B1AJZ9 1412 aa31.8■■■□□ 2.68
SUSD6-202ENST00000553497 ERICH3Q5RHP9 1530 aa31.77■■■□□ 2.68
SUSD6-202ENST00000553497 AEBP2Q6ZN18 517 aaPredicted RBP31.64■■■□□ 2.66
SUSD6-202ENST00000553497 KIF13AQ9H1H9 1805 aa31.61■■■□□ 2.65
SUSD6-202ENST00000553497 PRG4Q92954 1404 aaPredicted RBP31.58■■■□□ 2.65
SUSD6-202ENST00000553497 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms