RNA–Protein interactions for RNA: ENST00000553440.1

GABRG3-203, Transcript of gamma-aminobutyric acid type A receptor gamma3 subunit, humanhuman

TSL 3

Gene GABRG3, Length 615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRG3-203ENST00000553440 NISCHQ9Y2I1 1504 aa51.37■■■■■ 5.81
GABRG3-203ENST00000553440 CCDC180Q9P1Z9 1646 aa45.74■■■■■ 4.91
GABRG3-203ENST00000553440 ABCC9O60706 1549 aa44.87■■■■■ 4.77
GABRG3-203ENST00000553440 RB1CC1Q8TDY2 1594 aa43.07■■■■■ 4.49
GABRG3-203ENST00000553440 NACADO15069 1562 aa43■■■■■ 4.47
GABRG3-203ENST00000553440 ZCCHC6Q5VYS8 1495 aaKnown RBP42.8■■■■■ 4.44
GABRG3-203ENST00000553440 DCAF8L2P0C7V8 631 aa42.79■■■■■ 4.44
GABRG3-203ENST00000553440 MYO15BQ96JP2 1530 aa42.72■■■■■ 4.43
GABRG3-203ENST00000553440 DCAF1Q9Y4B6 1507 aa42.5■■■■■ 4.39
GABRG3-203ENST00000553440 UNC13AQ9UPW8 1703 aa42.19■■■■■ 4.34
GABRG3-203ENST00000553440 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.3
GABRG3-203ENST00000553440 PABPN1Q86U42 306 aaKnown RBP eCLIP41.86■■■■■ 4.29
GABRG3-203ENST00000553440 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
GABRG3-203ENST00000553440 SHROOM4Q9ULL8 1493 aa41.34■■■■■ 4.21
GABRG3-203ENST00000553440 DNAJC5BQ9UF47 199 aa41.34■■■■■ 4.21
GABRG3-203ENST00000553440 EIF4G1Q04637 1599 aaKnown RBP40.74■■■■■ 4.11
GABRG3-203ENST00000553440 CC2D2AQ9P2K1 1620 aa40.6■■■■■ 4.09
GABRG3-203ENST00000553440 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
GABRG3-203ENST00000553440 SMARCA4P51532 1647 aa39.91■■■■□ 3.98
GABRG3-203ENST00000553440 BAZ1AQ9NRL2 1556 aaPredicted RBP39.8■■■■□ 3.96
GABRG3-203ENST00000553440 ATAD2BQ9ULI0 1458 aa39.71■■■■□ 3.95
GABRG3-203ENST00000553440 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
GABRG3-203ENST00000553440 SMARCA2P51531 1590 aa39.62■■■■□ 3.93
GABRG3-203ENST00000553440 MROH2BQ7Z745 1585 aa39.62■■■■□ 3.93
GABRG3-203ENST00000553440 PEG3Q9GZU2 1588 aa39.53■■■■□ 3.92
GABRG3-203ENST00000553440 HMGXB3Q12766 1538 aa39.51■■■■□ 3.92
GABRG3-203ENST00000553440 BAZ1BQ9UIG0 1483 aaKnown RBP39.34■■■■□ 3.89
GABRG3-203ENST00000553440 WIZO95785 1651 aa39.18■■■■□ 3.86
GABRG3-203ENST00000553440 RSF1Q96T23 1441 aaPredicted RBP39.08■■■■□ 3.85
GABRG3-203ENST00000553440 NESP48681 1621 aa38.83■■■■□ 3.81
GABRG3-203ENST00000553440 TOP2AP11388 1531 aaKnown RBP38.74■■■■□ 3.79
GABRG3-203ENST00000553440 LAMC3Q9Y6N6 1575 aa38.66■■■■□ 3.78
GABRG3-203ENST00000553440 ERCC6Q03468 1493 aa38.62■■■■□ 3.77
GABRG3-203ENST00000553440 CADPSQ9ULU8 1353 aa38.5■■■■□ 3.75
GABRG3-203ENST00000553440 KIF21AQ7Z4S6 1674 aa38.36■■■■□ 3.73
GABRG3-203ENST00000553440 PDS5BQ9NTI5 1447 aa38.35■■■■□ 3.73
GABRG3-203ENST00000553440 CUX2O14529 1486 aa38.31■■■■□ 3.72
GABRG3-203ENST00000553440 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
GABRG3-203ENST00000553440 CFTRP13569 1480 aa38.28■■■■□ 3.72
GABRG3-203ENST00000553440 CCDC88BA6NC98 1476 aa38.27■■■■□ 3.72
GABRG3-203ENST00000553440 FANCD2Q9BXW9 1451 aa38.08■■■■□ 3.69
GABRG3-203ENST00000553440 CEP164Q9UPV0 1460 aa38.03■■■■□ 3.68
GABRG3-203ENST00000553440 MRC2Q9UBG0 1479 aa38.03■■■■□ 3.68
GABRG3-203ENST00000553440 PRDM2Q13029 1718 aa37.99■■■■□ 3.67
GABRG3-203ENST00000553440 WDR62O43379 1518 aa37.95■■■■□ 3.67
GABRG3-203ENST00000553440 SUPT5HO00267 1087 aaKnown RBP37.86■■■■□ 3.65
GABRG3-203ENST00000553440 URB2Q14146 1524 aaKnown RBP37.76■■■■□ 3.63
GABRG3-203ENST00000553440 TOPBP1Q92547 1522 aa37.48■■■■□ 3.59
GABRG3-203ENST00000553440 DNMBPQ6XZF7 1577 aa37.42■■■■□ 3.58
GABRG3-203ENST00000553440 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
GABRG3-203ENST00000553440 DNAJC5Q9H3Z4 198 aa37.25■■■■□ 3.55
GABRG3-203ENST00000553440 IFT140Q96RY7 1462 aa37.24■■■■□ 3.55
GABRG3-203ENST00000553440 CUX1P39880 1505 aa37.17■■■■□ 3.54
GABRG3-203ENST00000553440 POLA1P09884 1462 aaPredicted RBP37.16■■■■□ 3.54
GABRG3-203ENST00000553440 ZNF608Q9ULD9 1512 aaPredicted RBP37.15■■■■□ 3.54
GABRG3-203ENST00000553440 TARBP1Q13395 1621 aaKnown RBP37.11■■■■□ 3.53
GABRG3-203ENST00000553440 FGD5Q6ZNL6 1462 aa37.04■■■■□ 3.52
GABRG3-203ENST00000553440 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
GABRG3-203ENST00000553440 RAD54L2Q9Y4B4 1467 aa37■■■■□ 3.51
GABRG3-203ENST00000553440 SOGA1O94964 1423 aa36.93■■■■□ 3.5
GABRG3-203ENST00000553440 AQRO60306 1485 aaKnown RBP eCLIP36.88■■■■□ 3.49
GABRG3-203ENST00000553440 SYNJ1O43426 1573 aa36.82■■■■□ 3.48
GABRG3-203ENST00000553440 WRNQ14191 1432 aaPredicted RBP eCLIP36.81■■■■□ 3.48
GABRG3-203ENST00000553440 WDR97A6NE52 1622 aa36.81■■■■□ 3.48
GABRG3-203ENST00000553440 BIVM-ERCC5R4GMW8 1640 aa36.81■■■■□ 3.48
GABRG3-203ENST00000553440 TOP2BQ02880 1626 aa36.79■■■■□ 3.48
GABRG3-203ENST00000553440 TDRD9Q8NDG6 1382 aaKnown RBP36.77■■■■□ 3.48
GABRG3-203ENST00000553440 ABCA10Q8WWZ4 1543 aa36.67■■■■□ 3.46
GABRG3-203ENST00000553440 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
GABRG3-203ENST00000553440 ABCA5Q8WWZ7 1642 aa36.59■■■■□ 3.45
GABRG3-203ENST00000553440 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
GABRG3-203ENST00000553440 CHD1O14646 1710 aa36.54■■■■□ 3.44
GABRG3-203ENST00000553440 GRIN2BQ13224 1484 aa36.54■■■■□ 3.44
GABRG3-203ENST00000553440 GAPVD1Q14C86 1478 aa36.52■■■■□ 3.44
GABRG3-203ENST00000553440 PBRM1Q86U86 1689 aa36.51■■■■□ 3.44
GABRG3-203ENST00000553440 MAGI1Q96QZ7 1491 aaPredicted RBP36.47■■■■□ 3.43
GABRG3-203ENST00000553440 FBLN2P98095 1184 aa36.34■■■■□ 3.41
GABRG3-203ENST00000553440 SYNJ2O15056 1496 aa36.33■■■■□ 3.41
GABRG3-203ENST00000553440 ADAMTS12P58397 1594 aa36.24■■■■□ 3.39
GABRG3-203ENST00000553440 CHMP7Q8WUX9 453 aaPredicted RBP36.23■■■■□ 3.39
GABRG3-203ENST00000553440 ERICH3Q5RHP9 1530 aa36.21■■■■□ 3.39
GABRG3-203ENST00000553440 CLASP1Q7Z460 1538 aa36.18■■■■□ 3.38
GABRG3-203ENST00000553440 RIMBP3CA6NJZ7 1639 aa36.17■■■■□ 3.38
GABRG3-203ENST00000553440 RIMBP3BA6NNM3 1639 aa36.17■■■■□ 3.38
GABRG3-203ENST00000553440 RIMBP3Q9UFD9 1639 aa36.17■■■■□ 3.38
GABRG3-203ENST00000553440 ARHGEF11O15085 1522 aa36.14■■■■□ 3.38
GABRG3-203ENST00000553440 GRIN2AQ12879 1464 aa36.1■■■■□ 3.37
GABRG3-203ENST00000553440 FHAD1B1AJZ9 1412 aa36.09■■■■□ 3.37
GABRG3-203ENST00000553440 KIF27Q86VH2 1401 aa36.02■■■■□ 3.36
GABRG3-203ENST00000553440 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
GABRG3-203ENST00000553440 NUP160Q12769 1436 aa35.97■■■■□ 3.35
GABRG3-203ENST00000553440 TRIM41Q8WV44 630 aa35.94■■■■□ 3.34
GABRG3-203ENST00000553440 IGF1RP08069 1367 aa35.93■■■■□ 3.34
GABRG3-203ENST00000553440 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
GABRG3-203ENST00000553440 CUL7Q14999 1698 aa35.86■■■■□ 3.33
GABRG3-203ENST00000553440 RUSC2Q8N2Y8 1516 aa35.75■■■■□ 3.31
GABRG3-203ENST00000553440 SHROOM2Q13796 1616 aa35.74■■■■□ 3.31
GABRG3-203ENST00000553440 CYB5RLQ6IPT4 315 aa35.7■■■■□ 3.31
GABRG3-203ENST00000553440 ERCC6L2Q5T890 1561 aa35.69■■■■□ 3.3
GABRG3-203ENST00000553440 CARMIL1Q5VZK9 1371 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms