RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 NISCHQ9Y2I1 1504 aa25.91■■□□□ 1.74
IFT43-205ENST00000553438 ABCC9O60706 1549 aa23.6■■□□□ 1.37
IFT43-205ENST00000553438 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
IFT43-205ENST00000553438 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
IFT43-205ENST00000553438 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
IFT43-205ENST00000553438 NACADO15069 1562 aa22.13■■□□□ 1.13
IFT43-205ENST00000553438 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
IFT43-205ENST00000553438 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
IFT43-205ENST00000553438 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
IFT43-205ENST00000553438 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
IFT43-205ENST00000553438 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
IFT43-205ENST00000553438 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
IFT43-205ENST00000553438 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
IFT43-205ENST00000553438 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
IFT43-205ENST00000553438 CECR2Q9BXF3 1484 aa21.29■■□□□ 1
IFT43-205ENST00000553438 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
IFT43-205ENST00000553438 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
IFT43-205ENST00000553438 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
IFT43-205ENST00000553438 DNAJC5Q9H3Z4 198 aa20.71■□□□□ 0.91
IFT43-205ENST00000553438 NCAPD3P42695 1498 aa20.45■□□□□ 0.86
IFT43-205ENST00000553438 CUX2O14529 1486 aa20.43■□□□□ 0.86
IFT43-205ENST00000553438 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
IFT43-205ENST00000553438 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
IFT43-205ENST00000553438 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
IFT43-205ENST00000553438 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
IFT43-205ENST00000553438 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
IFT43-205ENST00000553438 NESP48681 1621 aa20.2■□□□□ 0.82
IFT43-205ENST00000553438 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
IFT43-205ENST00000553438 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
IFT43-205ENST00000553438 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
IFT43-205ENST00000553438 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
IFT43-205ENST00000553438 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
IFT43-205ENST00000553438 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
IFT43-205ENST00000553438 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
IFT43-205ENST00000553438 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
IFT43-205ENST00000553438 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
IFT43-205ENST00000553438 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
IFT43-205ENST00000553438 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
IFT43-205ENST00000553438 WDR62O43379 1518 aa19.71■□□□□ 0.75
IFT43-205ENST00000553438 WIZO95785 1651 aa19.69■□□□□ 0.74
IFT43-205ENST00000553438 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
IFT43-205ENST00000553438 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
IFT43-205ENST00000553438 CFTRP13569 1480 aa19.54■□□□□ 0.72
IFT43-205ENST00000553438 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
IFT43-205ENST00000553438 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
IFT43-205ENST00000553438 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
IFT43-205ENST00000553438 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
IFT43-205ENST00000553438 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
IFT43-205ENST00000553438 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
IFT43-205ENST00000553438 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
IFT43-205ENST00000553438 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
IFT43-205ENST00000553438 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
IFT43-205ENST00000553438 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
IFT43-205ENST00000553438 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
IFT43-205ENST00000553438 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
IFT43-205ENST00000553438 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
IFT43-205ENST00000553438 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
IFT43-205ENST00000553438 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
IFT43-205ENST00000553438 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
IFT43-205ENST00000553438 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.64
IFT43-205ENST00000553438 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
IFT43-205ENST00000553438 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
IFT43-205ENST00000553438 CHD1O14646 1710 aa18.99■□□□□ 0.63
IFT43-205ENST00000553438 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
IFT43-205ENST00000553438 FBLN2P98095 1184 aa18.98■□□□□ 0.63
IFT43-205ENST00000553438 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
IFT43-205ENST00000553438 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
IFT43-205ENST00000553438 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
IFT43-205ENST00000553438 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
IFT43-205ENST00000553438 SOGA1O94964 1423 aa18.9■□□□□ 0.62
IFT43-205ENST00000553438 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
IFT43-205ENST00000553438 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
IFT43-205ENST00000553438 WDR97A6NE52 1622 aa18.81■□□□□ 0.6
IFT43-205ENST00000553438 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
IFT43-205ENST00000553438 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
IFT43-205ENST00000553438 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
IFT43-205ENST00000553438 CUX1P39880 1505 aa18.77■□□□□ 0.6
IFT43-205ENST00000553438 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
IFT43-205ENST00000553438 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
IFT43-205ENST00000553438 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
IFT43-205ENST00000553438 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
IFT43-205ENST00000553438 PBRM1Q86U86 1689 aa18.62■□□□□ 0.57
IFT43-205ENST00000553438 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
IFT43-205ENST00000553438 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
IFT43-205ENST00000553438 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
IFT43-205ENST00000553438 GRIN2AQ12879 1464 aa18.52■□□□□ 0.55
IFT43-205ENST00000553438 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
IFT43-205ENST00000553438 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
IFT43-205ENST00000553438 NUP160Q12769 1436 aa18.48■□□□□ 0.55
IFT43-205ENST00000553438 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
IFT43-205ENST00000553438 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
IFT43-205ENST00000553438 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
IFT43-205ENST00000553438 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
IFT43-205ENST00000553438 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
IFT43-205ENST00000553438 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
IFT43-205ENST00000553438 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
IFT43-205ENST00000553438 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
IFT43-205ENST00000553438 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
IFT43-205ENST00000553438 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
IFT43-205ENST00000553438 KIF13AQ9H1H9 1805 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms