RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 NISCHQ9Y2I1 1504 aa23.5■■□□□ 1.35
CHD8-203ENST00000553283 ABCC9O60706 1549 aa21.15■□□□□ 0.98
CHD8-203ENST00000553283 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
CHD8-203ENST00000553283 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
CHD8-203ENST00000553283 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
CHD8-203ENST00000553283 NACADO15069 1562 aa19.95■□□□□ 0.78
CHD8-203ENST00000553283 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
CHD8-203ENST00000553283 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
CHD8-203ENST00000553283 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
CHD8-203ENST00000553283 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
CHD8-203ENST00000553283 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
CHD8-203ENST00000553283 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
CHD8-203ENST00000553283 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
CHD8-203ENST00000553283 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
CHD8-203ENST00000553283 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
CHD8-203ENST00000553283 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
CHD8-203ENST00000553283 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
CHD8-203ENST00000553283 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
CHD8-203ENST00000553283 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
CHD8-203ENST00000553283 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
CHD8-203ENST00000553283 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
CHD8-203ENST00000553283 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
CHD8-203ENST00000553283 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
CHD8-203ENST00000553283 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
CHD8-203ENST00000553283 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
CHD8-203ENST00000553283 CUX2O14529 1486 aa18.25■□□□□ 0.51
CHD8-203ENST00000553283 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
CHD8-203ENST00000553283 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
CHD8-203ENST00000553283 NESP48681 1621 aa18.16■□□□□ 0.5
CHD8-203ENST00000553283 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
CHD8-203ENST00000553283 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
CHD8-203ENST00000553283 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
CHD8-203ENST00000553283 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
CHD8-203ENST00000553283 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
CHD8-203ENST00000553283 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
CHD8-203ENST00000553283 WIZO95785 1651 aa17.84■□□□□ 0.45
CHD8-203ENST00000553283 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.45
CHD8-203ENST00000553283 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
CHD8-203ENST00000553283 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
CHD8-203ENST00000553283 WDR62O43379 1518 aa17.71■□□□□ 0.43
CHD8-203ENST00000553283 CFTRP13569 1480 aa17.68■□□□□ 0.42
CHD8-203ENST00000553283 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
CHD8-203ENST00000553283 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
CHD8-203ENST00000553283 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
CHD8-203ENST00000553283 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
CHD8-203ENST00000553283 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
CHD8-203ENST00000553283 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
CHD8-203ENST00000553283 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
CHD8-203ENST00000553283 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
CHD8-203ENST00000553283 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
CHD8-203ENST00000553283 TOPBP1Q92547 1522 aa17.33■□□□□ 0.37
CHD8-203ENST00000553283 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
CHD8-203ENST00000553283 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
CHD8-203ENST00000553283 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
CHD8-203ENST00000553283 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHD8-203ENST00000553283 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
CHD8-203ENST00000553283 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
CHD8-203ENST00000553283 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
CHD8-203ENST00000553283 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
CHD8-203ENST00000553283 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
CHD8-203ENST00000553283 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
CHD8-203ENST00000553283 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
CHD8-203ENST00000553283 FBLN2P98095 1184 aa17.11■□□□□ 0.33
CHD8-203ENST00000553283 SOGA1O94964 1423 aa17.11■□□□□ 0.33
CHD8-203ENST00000553283 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
CHD8-203ENST00000553283 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
CHD8-203ENST00000553283 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
CHD8-203ENST00000553283 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
CHD8-203ENST00000553283 CHD1O14646 1710 aa17.01■□□□□ 0.31
CHD8-203ENST00000553283 CUX1P39880 1505 aa17■□□□□ 0.31
CHD8-203ENST00000553283 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
CHD8-203ENST00000553283 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
CHD8-203ENST00000553283 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
CHD8-203ENST00000553283 WDR97A6NE52 1622 aa16.96■□□□□ 0.31
CHD8-203ENST00000553283 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
CHD8-203ENST00000553283 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
CHD8-203ENST00000553283 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
CHD8-203ENST00000553283 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
CHD8-203ENST00000553283 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
CHD8-203ENST00000553283 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
CHD8-203ENST00000553283 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
CHD8-203ENST00000553283 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
CHD8-203ENST00000553283 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
CHD8-203ENST00000553283 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
CHD8-203ENST00000553283 ABCA5Q8WWZ7 1642 aa16.77■□□□□ 0.27
CHD8-203ENST00000553283 PBRM1Q86U86 1689 aa16.76■□□□□ 0.27
CHD8-203ENST00000553283 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
CHD8-203ENST00000553283 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
CHD8-203ENST00000553283 FHAD1B1AJZ9 1412 aa16.68■□□□□ 0.26
CHD8-203ENST00000553283 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
CHD8-203ENST00000553283 NUP160Q12769 1436 aa16.67■□□□□ 0.26
CHD8-203ENST00000553283 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
CHD8-203ENST00000553283 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
CHD8-203ENST00000553283 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
CHD8-203ENST00000553283 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
CHD8-203ENST00000553283 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
CHD8-203ENST00000553283 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
CHD8-203ENST00000553283 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
CHD8-203ENST00000553283 IGF1RP08069 1367 aa16.47■□□□□ 0.23
CHD8-203ENST00000553283 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms