RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
PCNX1-203ENST00000553272 ABCC9O60706 1549 aa19.05■□□□□ 0.64
PCNX1-203ENST00000553272 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.56
PCNX1-203ENST00000553272 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
PCNX1-203ENST00000553272 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
PCNX1-203ENST00000553272 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
PCNX1-203ENST00000553272 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
PCNX1-203ENST00000553272 NACADO15069 1562 aa17.55■□□□□ 0.4
PCNX1-203ENST00000553272 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
PCNX1-203ENST00000553272 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
PCNX1-203ENST00000553272 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
PCNX1-203ENST00000553272 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
PCNX1-203ENST00000553272 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
PCNX1-203ENST00000553272 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
PCNX1-203ENST00000553272 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
PCNX1-203ENST00000553272 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
PCNX1-203ENST00000553272 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
PCNX1-203ENST00000553272 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
PCNX1-203ENST00000553272 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
PCNX1-203ENST00000553272 CUX2O14529 1486 aa16.54■□□□□ 0.24
PCNX1-203ENST00000553272 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
PCNX1-203ENST00000553272 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
PCNX1-203ENST00000553272 NESP48681 1621 aa16.23■□□□□ 0.19
PCNX1-203ENST00000553272 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
PCNX1-203ENST00000553272 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
PCNX1-203ENST00000553272 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
PCNX1-203ENST00000553272 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
PCNX1-203ENST00000553272 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
PCNX1-203ENST00000553272 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
PCNX1-203ENST00000553272 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
PCNX1-203ENST00000553272 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
PCNX1-203ENST00000553272 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
PCNX1-203ENST00000553272 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
PCNX1-203ENST00000553272 PEG3Q9GZU2 1588 aa15.88■□□□□ 0.13
PCNX1-203ENST00000553272 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
PCNX1-203ENST00000553272 WDR62O43379 1518 aa15.78■□□□□ 0.12
PCNX1-203ENST00000553272 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
PCNX1-203ENST00000553272 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.11
PCNX1-203ENST00000553272 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
PCNX1-203ENST00000553272 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
PCNX1-203ENST00000553272 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
PCNX1-203ENST00000553272 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
PCNX1-203ENST00000553272 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
PCNX1-203ENST00000553272 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
PCNX1-203ENST00000553272 WIZO95785 1651 aa15.56■□□□□ 0.08
PCNX1-203ENST00000553272 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
PCNX1-203ENST00000553272 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
PCNX1-203ENST00000553272 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
PCNX1-203ENST00000553272 CFTRP13569 1480 aa15.47■□□□□ 0.07
PCNX1-203ENST00000553272 CHD1O14646 1710 aa15.44■□□□□ 0.06
PCNX1-203ENST00000553272 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
PCNX1-203ENST00000553272 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
PCNX1-203ENST00000553272 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
PCNX1-203ENST00000553272 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
PCNX1-203ENST00000553272 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
PCNX1-203ENST00000553272 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
PCNX1-203ENST00000553272 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
PCNX1-203ENST00000553272 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
PCNX1-203ENST00000553272 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
PCNX1-203ENST00000553272 IFT140Q96RY7 1462 aa15.27■□□□□ 0.03
PCNX1-203ENST00000553272 TOPBP1Q92547 1522 aa15.19■□□□□ 0.02
PCNX1-203ENST00000553272 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
PCNX1-203ENST00000553272 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
PCNX1-203ENST00000553272 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
PCNX1-203ENST00000553272 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCNX1-203ENST00000553272 FBLN2P98095 1184 aa15.12■□□□□ 0.01
PCNX1-203ENST00000553272 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
PCNX1-203ENST00000553272 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
PCNX1-203ENST00000553272 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
PCNX1-203ENST00000553272 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
PCNX1-203ENST00000553272 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
PCNX1-203ENST00000553272 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
PCNX1-203ENST00000553272 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
PCNX1-203ENST00000553272 SOGA1O94964 1423 aa14.95□□□□□ -0.02
PCNX1-203ENST00000553272 PBRM1Q86U86 1689 aa14.95□□□□□ -0.02
PCNX1-203ENST00000553272 KIF13AQ9H1H9 1805 aa14.94□□□□□ -0.02
PCNX1-203ENST00000553272 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
PCNX1-203ENST00000553272 WDR97A6NE52 1622 aa14.9□□□□□ -0.02
PCNX1-203ENST00000553272 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
PCNX1-203ENST00000553272 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
PCNX1-203ENST00000553272 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
PCNX1-203ENST00000553272 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
PCNX1-203ENST00000553272 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
PCNX1-203ENST00000553272 SYNJ2O15056 1496 aa14.83□□□□□ -0.03
PCNX1-203ENST00000553272 CUX1P39880 1505 aa14.82□□□□□ -0.04
PCNX1-203ENST00000553272 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
PCNX1-203ENST00000553272 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
PCNX1-203ENST00000553272 TSPOAP1O95153 1857 aa14.73□□□□□ -0.05
PCNX1-203ENST00000553272 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
PCNX1-203ENST00000553272 ABCA10Q8WWZ4 1543 aa14.7□□□□□ -0.06
PCNX1-203ENST00000553272 SHROOM2Q13796 1616 aa14.68□□□□□ -0.06
PCNX1-203ENST00000553272 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
PCNX1-203ENST00000553272 KDM6BO15054 1643 aa14.66□□□□□ -0.06
PCNX1-203ENST00000553272 GRIN2AQ12879 1464 aa14.65□□□□□ -0.06
PCNX1-203ENST00000553272 NUP160Q12769 1436 aa14.63□□□□□ -0.07
PCNX1-203ENST00000553272 DIP2BQ9P265 1576 aa14.63□□□□□ -0.07
PCNX1-203ENST00000553272 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
PCNX1-203ENST00000553272 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
PCNX1-203ENST00000553272 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
PCNX1-203ENST00000553272 ABCC10Q5T3U5 1492 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms