RNA–Protein interactions for RNA: ENST00000553182.5

DDX23-218, Transcript of DEAD-box helicase 23, humanhuman

TSL 3

Gene DDX23, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-218ENST00000553182 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
DDX23-218ENST00000553182 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
DDX23-218ENST00000553182 ABCC9O60706 1549 aa31.58■■■□□ 2.65
DDX23-218ENST00000553182 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
DDX23-218ENST00000553182 NACADO15069 1562 aa30■■■□□ 2.39
DDX23-218ENST00000553182 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
DDX23-218ENST00000553182 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
DDX23-218ENST00000553182 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
DDX23-218ENST00000553182 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
DDX23-218ENST00000553182 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
DDX23-218ENST00000553182 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
DDX23-218ENST00000553182 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
DDX23-218ENST00000553182 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
DDX23-218ENST00000553182 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
DDX23-218ENST00000553182 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
DDX23-218ENST00000553182 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
DDX23-218ENST00000553182 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
DDX23-218ENST00000553182 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
DDX23-218ENST00000553182 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
DDX23-218ENST00000553182 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
DDX23-218ENST00000553182 SMARCA2P51531 1590 aa27.54■■■□□ 2
DDX23-218ENST00000553182 SMARCA4P51532 1647 aa27.52■■■□□ 2
DDX23-218ENST00000553182 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
DDX23-218ENST00000553182 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
DDX23-218ENST00000553182 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
DDX23-218ENST00000553182 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
DDX23-218ENST00000553182 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
DDX23-218ENST00000553182 CUX2O14529 1486 aa27.27■■□□□ 1.96
DDX23-218ENST00000553182 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
DDX23-218ENST00000553182 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
DDX23-218ENST00000553182 NESP48681 1621 aa27.12■■□□□ 1.93
DDX23-218ENST00000553182 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
DDX23-218ENST00000553182 PDS5BQ9NTI5 1447 aa26.95■■□□□ 1.9
DDX23-218ENST00000553182 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.9
DDX23-218ENST00000553182 WIZO95785 1651 aa26.84■■□□□ 1.89
DDX23-218ENST00000553182 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
DDX23-218ENST00000553182 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
DDX23-218ENST00000553182 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
DDX23-218ENST00000553182 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
DDX23-218ENST00000553182 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
DDX23-218ENST00000553182 CFTRP13569 1480 aa26.56■■□□□ 1.84
DDX23-218ENST00000553182 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
DDX23-218ENST00000553182 WDR62O43379 1518 aa26.54■■□□□ 1.84
DDX23-218ENST00000553182 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
DDX23-218ENST00000553182 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
DDX23-218ENST00000553182 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
DDX23-218ENST00000553182 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
DDX23-218ENST00000553182 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
DDX23-218ENST00000553182 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
DDX23-218ENST00000553182 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
DDX23-218ENST00000553182 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
DDX23-218ENST00000553182 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
DDX23-218ENST00000553182 DNMBPQ6XZF7 1577 aa25.91■■□□□ 1.74
DDX23-218ENST00000553182 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
DDX23-218ENST00000553182 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
DDX23-218ENST00000553182 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
DDX23-218ENST00000553182 TARBP1Q13395 1621 aaKnown RBP25.73■■□□□ 1.71
DDX23-218ENST00000553182 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.712e-6■■□□□ 11.6
DDX23-218ENST00000553182 SOGA1O94964 1423 aa25.71■■□□□ 1.71
DDX23-218ENST00000553182 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
DDX23-218ENST00000553182 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
DDX23-218ENST00000553182 FBLN2P98095 1184 aa25.6■■□□□ 1.69
DDX23-218ENST00000553182 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
DDX23-218ENST00000553182 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
DDX23-218ENST00000553182 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
DDX23-218ENST00000553182 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
DDX23-218ENST00000553182 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
DDX23-218ENST00000553182 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
DDX23-218ENST00000553182 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
DDX23-218ENST00000553182 CUX1P39880 1505 aa25.55■■□□□ 1.68
DDX23-218ENST00000553182 CHD1O14646 1710 aa25.49■■□□□ 1.67
DDX23-218ENST00000553182 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
DDX23-218ENST00000553182 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
DDX23-218ENST00000553182 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
DDX23-218ENST00000553182 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
DDX23-218ENST00000553182 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
DDX23-218ENST00000553182 GAPVD1Q14C86 1478 aa25.36■■□□□ 1.65
DDX23-218ENST00000553182 SYNJ2O15056 1496 aa25.35■■□□□ 1.65
DDX23-218ENST00000553182 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
DDX23-218ENST00000553182 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
DDX23-218ENST00000553182 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
DDX23-218ENST00000553182 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
DDX23-218ENST00000553182 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
DDX23-218ENST00000553182 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
DDX23-218ENST00000553182 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
DDX23-218ENST00000553182 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
DDX23-218ENST00000553182 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
DDX23-218ENST00000553182 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
DDX23-218ENST00000553182 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
DDX23-218ENST00000553182 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
DDX23-218ENST00000553182 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
DDX23-218ENST00000553182 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
DDX23-218ENST00000553182 NUP160Q12769 1436 aa25.02■■□□□ 1.6
DDX23-218ENST00000553182 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
DDX23-218ENST00000553182 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
DDX23-218ENST00000553182 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
DDX23-218ENST00000553182 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.57
DDX23-218ENST00000553182 KIF27Q86VH2 1401 aa24.79■■□□□ 1.56
DDX23-218ENST00000553182 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
DDX23-218ENST00000553182 IGF1RP08069 1367 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms