RNA–Protein interactions for RNA: ENST00000553177.5

LINC01405-204, Transcript of long intergenic non-protein coding RNA 1405, humanhuman

TSL 4 BASIC

Gene LINC01405, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01405-204ENST00000553177 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
LINC01405-204ENST00000553177 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
LINC01405-204ENST00000553177 ABCC9O60706 1549 aa20.36■□□□□ 0.85
LINC01405-204ENST00000553177 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
LINC01405-204ENST00000553177 NACADO15069 1562 aa19.38■□□□□ 0.69
LINC01405-204ENST00000553177 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
LINC01405-204ENST00000553177 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
LINC01405-204ENST00000553177 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
LINC01405-204ENST00000553177 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
LINC01405-204ENST00000553177 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
LINC01405-204ENST00000553177 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
LINC01405-204ENST00000553177 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC01405-204ENST00000553177 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
LINC01405-204ENST00000553177 SCRIBQ14160 1630 aa18.71■□□□□ 0.58
LINC01405-204ENST00000553177 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
LINC01405-204ENST00000553177 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
LINC01405-204ENST00000553177 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
LINC01405-204ENST00000553177 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
LINC01405-204ENST00000553177 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
LINC01405-204ENST00000553177 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
LINC01405-204ENST00000553177 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
LINC01405-204ENST00000553177 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
LINC01405-204ENST00000553177 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
LINC01405-204ENST00000553177 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
LINC01405-204ENST00000553177 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
LINC01405-204ENST00000553177 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
LINC01405-204ENST00000553177 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
LINC01405-204ENST00000553177 CUX2O14529 1486 aa17.75■□□□□ 0.43
LINC01405-204ENST00000553177 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
LINC01405-204ENST00000553177 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
LINC01405-204ENST00000553177 WIZO95785 1651 aa17.64■□□□□ 0.41
LINC01405-204ENST00000553177 ERCC6Q03468 1493 aa17.55■□□□□ 0.4
LINC01405-204ENST00000553177 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
LINC01405-204ENST00000553177 NESP48681 1621 aa17.43■□□□□ 0.38
LINC01405-204ENST00000553177 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
LINC01405-204ENST00000553177 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
LINC01405-204ENST00000553177 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
LINC01405-204ENST00000553177 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
LINC01405-204ENST00000553177 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
LINC01405-204ENST00000553177 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
LINC01405-204ENST00000553177 CFTRP13569 1480 aa17.27■□□□□ 0.36
LINC01405-204ENST00000553177 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
LINC01405-204ENST00000553177 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
LINC01405-204ENST00000553177 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
LINC01405-204ENST00000553177 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
LINC01405-204ENST00000553177 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
LINC01405-204ENST00000553177 WDR62O43379 1518 aa17.04■□□□□ 0.32
LINC01405-204ENST00000553177 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
LINC01405-204ENST00000553177 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
LINC01405-204ENST00000553177 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
LINC01405-204ENST00000553177 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
LINC01405-204ENST00000553177 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
LINC01405-204ENST00000553177 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
LINC01405-204ENST00000553177 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
LINC01405-204ENST00000553177 CUX1P39880 1505 aa16.74■□□□□ 0.27
LINC01405-204ENST00000553177 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
LINC01405-204ENST00000553177 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
LINC01405-204ENST00000553177 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
LINC01405-204ENST00000553177 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
LINC01405-204ENST00000553177 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
LINC01405-204ENST00000553177 SOGA1O94964 1423 aa16.7■□□□□ 0.26
LINC01405-204ENST00000553177 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
LINC01405-204ENST00000553177 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
LINC01405-204ENST00000553177 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
LINC01405-204ENST00000553177 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
LINC01405-204ENST00000553177 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
LINC01405-204ENST00000553177 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
LINC01405-204ENST00000553177 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
LINC01405-204ENST00000553177 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
LINC01405-204ENST00000553177 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
LINC01405-204ENST00000553177 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
LINC01405-204ENST00000553177 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC01405-204ENST00000553177 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
LINC01405-204ENST00000553177 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
LINC01405-204ENST00000553177 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
LINC01405-204ENST00000553177 CHD1O14646 1710 aa16.48■□□□□ 0.23
LINC01405-204ENST00000553177 GAPVD1Q14C86 1478 aa16.48■□□□□ 0.23
LINC01405-204ENST00000553177 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
LINC01405-204ENST00000553177 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
LINC01405-204ENST00000553177 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
LINC01405-204ENST00000553177 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
LINC01405-204ENST00000553177 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
LINC01405-204ENST00000553177 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
LINC01405-204ENST00000553177 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
LINC01405-204ENST00000553177 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
LINC01405-204ENST00000553177 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
LINC01405-204ENST00000553177 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
LINC01405-204ENST00000553177 FBLN2P98095 1184 aa16.33■□□□□ 0.2
LINC01405-204ENST00000553177 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
LINC01405-204ENST00000553177 IGF1RP08069 1367 aa16.31■□□□□ 0.2
LINC01405-204ENST00000553177 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
LINC01405-204ENST00000553177 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
LINC01405-204ENST00000553177 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
LINC01405-204ENST00000553177 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
LINC01405-204ENST00000553177 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
LINC01405-204ENST00000553177 CUL7Q14999 1698 aa16.23■□□□□ 0.19
LINC01405-204ENST00000553177 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
LINC01405-204ENST00000553177 EEA1Q15075 1411 aa16.2■□□□□ 0.18
LINC01405-204ENST00000553177 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
LINC01405-204ENST00000553177 NUP160Q12769 1436 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms