RNA–Protein interactions for RNA: ENST00000553169.1

CCT2-214, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-214ENST00000553169 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
CCT2-214ENST00000553169 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
CCT2-214ENST00000553169 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
CCT2-214ENST00000553169 ABCC9O60706 1549 aa17.79■□□□□ 0.44
CCT2-214ENST00000553169 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
CCT2-214ENST00000553169 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
CCT2-214ENST00000553169 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
CCT2-214ENST00000553169 NACADO15069 1562 aa16.86■□□□□ 0.29
CCT2-214ENST00000553169 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
CCT2-214ENST00000553169 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
CCT2-214ENST00000553169 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
CCT2-214ENST00000553169 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCT2-214ENST00000553169 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
CCT2-214ENST00000553169 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
CCT2-214ENST00000553169 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
CCT2-214ENST00000553169 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
CCT2-214ENST00000553169 DCAF1Q9Y4B6 1507 aa16.38■□□□□ 0.21
CCT2-214ENST00000553169 ZCCHC6Q5VYS8 1495 aaKnown RBP16.34■□□□□ 0.21
CCT2-214ENST00000553169 SHROOM4Q9ULL8 1493 aa16.31■□□□□ 0.2
CCT2-214ENST00000553169 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
CCT2-214ENST00000553169 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
CCT2-214ENST00000553169 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
CCT2-214ENST00000553169 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
CCT2-214ENST00000553169 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
CCT2-214ENST00000553169 NCAPD3P42695 1498 aa15.58■□□□□ 0.08
CCT2-214ENST00000553169 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
CCT2-214ENST00000553169 CUX2O14529 1486 aa15.46■□□□□ 0.06
CCT2-214ENST00000553169 ADRA2BP18089 450 aa15.45■□□□□ 0.06
CCT2-214ENST00000553169 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
CCT2-214ENST00000553169 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
CCT2-214ENST00000553169 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
CCT2-214ENST00000553169 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
CCT2-214ENST00000553169 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
CCT2-214ENST00000553169 PEG3Q9GZU2 1588 aa15.32■□□□□ 0.04
CCT2-214ENST00000553169 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
CCT2-214ENST00000553169 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
CCT2-214ENST00000553169 NESP48681 1621 aa15.25■□□□□ 0.03
CCT2-214ENST00000553169 KCNA4P22459 653 aa15.22■□□□□ 0.03
CCT2-214ENST00000553169 FOXD1Q16676 465 aa15.22■□□□□ 0.03
CCT2-214ENST00000553169 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
CCT2-214ENST00000553169 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
CCT2-214ENST00000553169 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
CCT2-214ENST00000553169 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
CCT2-214ENST00000553169 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
CCT2-214ENST00000553169 CADPSQ9ULU8 1353 aa15.08■□□□□ 0
CCT2-214ENST00000553169 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
CCT2-214ENST00000553169 WIZO95785 1651 aa14.98□□□□□ -0.01
CCT2-214ENST00000553169 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
CCT2-214ENST00000553169 WDR62O43379 1518 aa14.95□□□□□ -0.02
CCT2-214ENST00000553169 CFTRP13569 1480 aa14.89□□□□□ -0.03
CCT2-214ENST00000553169 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
CCT2-214ENST00000553169 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
CCT2-214ENST00000553169 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
CCT2-214ENST00000553169 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
CCT2-214ENST00000553169 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
CCT2-214ENST00000553169 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
CCT2-214ENST00000553169 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
CCT2-214ENST00000553169 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
CCT2-214ENST00000553169 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
CCT2-214ENST00000553169 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
CCT2-214ENST00000553169 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
CCT2-214ENST00000553169 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
CCT2-214ENST00000553169 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
CCT2-214ENST00000553169 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
CCT2-214ENST00000553169 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
CCT2-214ENST00000553169 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
CCT2-214ENST00000553169 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
CCT2-214ENST00000553169 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
CCT2-214ENST00000553169 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
CCT2-214ENST00000553169 RIMBP3CA6NJZ7 1639 aa14.49□□□□□ -0.09
CCT2-214ENST00000553169 RIMBP3BA6NNM3 1639 aa14.49□□□□□ -0.09
CCT2-214ENST00000553169 RIMBP3Q9UFD9 1639 aa14.49□□□□□ -0.09
CCT2-214ENST00000553169 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
CCT2-214ENST00000553169 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.09
CCT2-214ENST00000553169 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
CCT2-214ENST00000553169 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.16e-7■□□□□ 9.3
CCT2-214ENST00000553169 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
CCT2-214ENST00000553169 CHD1O14646 1710 aa14.38□□□□□ -0.11
CCT2-214ENST00000553169 SOGA1O94964 1423 aa14.37□□□□□ -0.11
CCT2-214ENST00000553169 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
CCT2-214ENST00000553169 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
CCT2-214ENST00000553169 RAD54L2Q9Y4B4 1467 aa14.34□□□□□ -0.11
CCT2-214ENST00000553169 FBLN2P98095 1184 aa14.34□□□□□ -0.11
CCT2-214ENST00000553169 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
CCT2-214ENST00000553169 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
CCT2-214ENST00000553169 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
CCT2-214ENST00000553169 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
CCT2-214ENST00000553169 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
CCT2-214ENST00000553169 CUX1P39880 1505 aa14.27□□□□□ -0.12
CCT2-214ENST00000553169 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
CCT2-214ENST00000553169 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
CCT2-214ENST00000553169 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
CCT2-214ENST00000553169 CLASP1Q7Z460 1538 aa14.25□□□□□ -0.13
CCT2-214ENST00000553169 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
CCT2-214ENST00000553169 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
CCT2-214ENST00000553169 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
CCT2-214ENST00000553169 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
CCT2-214ENST00000553169 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
CCT2-214ENST00000553169 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CCT2-214ENST00000553169 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms