RNA–Protein interactions for RNA: ENST00000553112.5

SDS-206, Transcript of serine dehydratase, humanhuman

TSL 2

Gene SDS, Length 1,299 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDS-206ENST00000553112 NISCHQ9Y2I1 1504 aa57.81■■■■■ 6.84
SDS-206ENST00000553112 CCDC180Q9P1Z9 1646 aa51.83■■■■■ 5.89
SDS-206ENST00000553112 ABCC9O60706 1549 aa51.29■■■■■ 5.8
SDS-206ENST00000553112 RB1CC1Q8TDY2 1594 aa49.08■■■■■ 5.45
SDS-206ENST00000553112 NACADO15069 1562 aa48.81■■■■■ 5.4
SDS-206ENST00000553112 DCAF8L2P0C7V8 631 aa48.65■■■■■ 5.38
SDS-206ENST00000553112 MYO15BQ96JP2 1530 aa48.2■■■■■ 5.31
SDS-206ENST00000553112 UNC13AQ9UPW8 1703 aa48.07■■■■■ 5.29
SDS-206ENST00000553112 ZCCHC6Q5VYS8 1495 aaKnown RBP48.02■■■■■ 5.28
SDS-206ENST00000553112 DCAF1Q9Y4B6 1507 aa47.76■■■■■ 5.24
SDS-206ENST00000553112 PABPN1Q86U42 306 aaKnown RBP eCLIP47.74■■■■■ 5.23
SDS-206ENST00000553112 BICRAQ9NZM4 1560 aa47.54■■■■■ 5.2
SDS-206ENST00000553112 DNAJC5BQ9UF47 199 aa47.52■■■■■ 5.2
SDS-206ENST00000553112 SCRIBQ14160 1630 aa47.25■■■■■ 5.15
SDS-206ENST00000553112 SHROOM4Q9ULL8 1493 aa46.98■■■■■ 5.11
SDS-206ENST00000553112 CC2D2AQ9P2K1 1620 aa46.39■■■■■ 5.02
SDS-206ENST00000553112 EIF4G1Q04637 1599 aaKnown RBP46.39■■■■■ 5.02
SDS-206ENST00000553112 CECR2Q9BXF3 1484 aa46.14■■■■■ 4.98
SDS-206ENST00000553112 SMARCA4P51532 1647 aa45.08■■■■■ 4.81
SDS-206ENST00000553112 NCAPD3P42695 1498 aa44.95■■■■■ 4.79
SDS-206ENST00000553112 SMARCA2P51531 1590 aa44.91■■■■■ 4.78
SDS-206ENST00000553112 ATAD2BQ9ULI0 1458 aa44.91■■■■■ 4.78
SDS-206ENST00000553112 BAZ1AQ9NRL2 1556 aaPredicted RBP44.9■■■■■ 4.78
SDS-206ENST00000553112 HMGXB3Q12766 1538 aa44.76■■■■■ 4.76
SDS-206ENST00000553112 BAZ1BQ9UIG0 1483 aaKnown RBP44.59■■■■■ 4.73
SDS-206ENST00000553112 PEG3Q9GZU2 1588 aa44.57■■■■■ 4.73
SDS-206ENST00000553112 MROH2BQ7Z745 1585 aa44.55■■■■■ 4.72
SDS-206ENST00000553112 ERCC6Q03468 1493 aa44.33■■■■■ 4.69
SDS-206ENST00000553112 NESP48681 1621 aa44.17■■■■■ 4.66
SDS-206ENST00000553112 WIZO95785 1651 aa44.13■■■■■ 4.65
SDS-206ENST00000553112 CUX2O14529 1486 aa44.02■■■■■ 4.64
SDS-206ENST00000553112 LAMC3Q9Y6N6 1575 aa44■■■■■ 4.63
SDS-206ENST00000553112 KIF21AQ7Z4S6 1674 aa43.77■■■■■ 4.6
SDS-206ENST00000553112 RSF1Q96T23 1441 aaPredicted RBP43.73■■■■■ 4.59
SDS-206ENST00000553112 THOC2Q8NI27 1593 aaKnown RBP43.7■■■■■ 4.59
SDS-206ENST00000553112 PDS5BQ9NTI5 1447 aa43.68■■■■■ 4.58
SDS-206ENST00000553112 CADPSQ9ULU8 1353 aa43.62■■■■■ 4.57
SDS-206ENST00000553112 TOP2AP11388 1531 aaKnown RBP43.58■■■■■ 4.57
SDS-206ENST00000553112 DNAJC5Q9H3Z4 198 aa43.37■■■■■ 4.53
SDS-206ENST00000553112 MRC2Q9UBG0 1479 aa43.29■■■■■ 4.52
SDS-206ENST00000553112 CEP164Q9UPV0 1460 aa43.25■■■■■ 4.51
SDS-206ENST00000553112 CFTRP13569 1480 aa43.23■■■■■ 4.51
SDS-206ENST00000553112 FANCD2Q9BXW9 1451 aa43.19■■■■■ 4.51
SDS-206ENST00000553112 WDR62O43379 1518 aa43.17■■■■■ 4.5
SDS-206ENST00000553112 PRDM2Q13029 1718 aa43.12■■■■■ 4.49
SDS-206ENST00000553112 CCDC88BA6NC98 1476 aa43■■■■■ 4.47
SDS-206ENST00000553112 URB2Q14146 1524 aaKnown RBP42.78■■■■■ 4.44
SDS-206ENST00000553112 TOPBP1Q92547 1522 aa42.42■■■■■ 4.38
SDS-206ENST00000553112 ABCC8Q09428 1581 aa42.39■■■■■ 4.38
SDS-206ENST00000553112 DNMBPQ6XZF7 1577 aa42.36■■■■■ 4.37
SDS-206ENST00000553112 IFT140Q96RY7 1462 aa42.31■■■■■ 4.36
SDS-206ENST00000553112 SUPT5HO00267 1087 aaKnown RBP42.22■■■■■ 4.35
SDS-206ENST00000553112 ZNF608Q9ULD9 1512 aaPredicted RBP42.17■■■■■ 4.34
SDS-206ENST00000553112 EIF4G3O43432 1585 aaKnown RBP42.09■■■■■ 4.33
SDS-206ENST00000553112 TARBP1Q13395 1621 aaKnown RBP42.03■■■■■ 4.32
SDS-206ENST00000553112 OSCARQ8IYS5 282 aa42.03■■■■■ 4.32
SDS-206ENST00000553112 POLA1P09884 1462 aaPredicted RBP42.01■■■■■ 4.32
SDS-206ENST00000553112 AQRO60306 1485 aaKnown RBP eCLIP41.85■■■■■ 4.29
SDS-206ENST00000553112 CUX1P39880 1505 aa41.85■■■■■ 4.29
SDS-206ENST00000553112 FGD5Q6ZNL6 1462 aa41.84■■■■■ 4.29
SDS-206ENST00000553112 RAD54L2Q9Y4B4 1467 aa41.83■■■■■ 4.29
SDS-206ENST00000553112 SOGA1O94964 1423 aa41.81■■■■■ 4.28
SDS-206ENST00000553112 TRIM41Q8WV44 630 aa41.79■■■■■ 4.28
SDS-206ENST00000553112 CHD1O14646 1710 aa41.76■■■■■ 4.28
SDS-206ENST00000553112 WDR97A6NE52 1622 aa41.69■■■■■ 4.26
SDS-206ENST00000553112 TDRD9Q8NDG6 1382 aaKnown RBP41.65■■■■■ 4.26
SDS-206ENST00000553112 RIMBP3CA6NJZ7 1639 aa41.55■■■■■ 4.24
SDS-206ENST00000553112 RIMBP3BA6NNM3 1639 aa41.55■■■■■ 4.24
SDS-206ENST00000553112 RIMBP3Q9UFD9 1639 aa41.55■■■■■ 4.24
SDS-206ENST00000553112 FBLN2P98095 1184 aa41.55■■■■■ 4.24
SDS-206ENST00000553112 SNAPC4Q5SXM2 1469 aa41.49■■■■■ 4.23
SDS-206ENST00000553112 PBRM1Q86U86 1689 aa41.46■■■■■ 4.23
SDS-206ENST00000553112 GRIN2BQ13224 1484 aa41.43■■■■■ 4.22
SDS-206ENST00000553112 ARHGEF11O15085 1522 aa41.42■■■■■ 4.22
SDS-206ENST00000553112 MAGI1Q96QZ7 1491 aaPredicted RBP41.4■■■■■ 4.22
SDS-206ENST00000553112 BIVM-ERCC5R4GMW8 1640 aa41.39■■■■■ 4.22
SDS-206ENST00000553112 ABCA10Q8WWZ4 1543 aa41.36■■■■■ 4.21
SDS-206ENST00000553112 TOP2BQ02880 1626 aa41.35■■■■■ 4.21
SDS-206ENST00000553112 GAPVD1Q14C86 1478 aa41.34■■■■■ 4.21
SDS-206ENST00000553112 WRNQ14191 1432 aaPredicted RBP eCLIP41.33■■■■■ 4.21
SDS-206ENST00000553112 ABCA5Q8WWZ7 1642 aa41.32■■■■■ 4.2
SDS-206ENST00000553112 SYNJ1O43426 1573 aa41.3■■■■■ 4.2
SDS-206ENST00000553112 CHMP7Q8WUX9 453 aaPredicted RBP41.29■■■■■ 4.2
SDS-206ENST00000553112 SYNJ2O15056 1496 aa41.24■■■■■ 4.19
SDS-206ENST00000553112 CLASP1Q7Z460 1538 aa41.14■■■■■ 4.18
SDS-206ENST00000553112 CYB5RLQ6IPT4 315 aa41.03■■■■■ 4.16
SDS-206ENST00000553112 ARAP1Q96P48 1450 aa41.02■■■■■ 4.16
SDS-206ENST00000553112 ADAMTS12P58397 1594 aa40.99■■■■■ 4.15
SDS-206ENST00000553112 GRIN2AQ12879 1464 aa40.9■■■■■ 4.14
SDS-206ENST00000553112 ERICH3Q5RHP9 1530 aa40.88■■■■■ 4.14
SDS-206ENST00000553112 FHAD1B1AJZ9 1412 aa40.82■■■■■ 4.12
SDS-206ENST00000553112 CEP170Q5SW79 1584 aa40.75■■■■■ 4.11
SDS-206ENST00000553112 NUP160Q12769 1436 aa40.68■■■■■ 4.1
SDS-206ENST00000553112 SHROOM2Q13796 1616 aa40.54■■■■■ 4.08
SDS-206ENST00000553112 ERCC6L2Q5T890 1561 aa40.52■■■■■ 4.08
SDS-206ENST00000553112 KIF27Q86VH2 1401 aa40.52■■■■■ 4.08
SDS-206ENST00000553112 TRHP20396 242 aaPredicted RBP40.52■■■■■ 4.08
SDS-206ENST00000553112 CUL7Q14999 1698 aa40.48■■■■■ 4.07
SDS-206ENST00000553112 RUSC2Q8N2Y8 1516 aa40.41■■■■■ 4.06
SDS-206ENST00000553112 IGF1RP08069 1367 aa40.35■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms