RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
DDX23-217ENST00000553065 ABCC9O60706 1549 aa23.54■■□□□ 1.36
DDX23-217ENST00000553065 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
DDX23-217ENST00000553065 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
DDX23-217ENST00000553065 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
DDX23-217ENST00000553065 NACADO15069 1562 aa22.26■■□□□ 1.15
DDX23-217ENST00000553065 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
DDX23-217ENST00000553065 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.12
DDX23-217ENST00000553065 MYO15BQ96JP2 1530 aa22.02■■□□□ 1.12
DDX23-217ENST00000553065 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
DDX23-217ENST00000553065 UNC13AQ9UPW8 1703 aa21.9■■□□□ 1.1
DDX23-217ENST00000553065 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
DDX23-217ENST00000553065 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
DDX23-217ENST00000553065 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
DDX23-217ENST00000553065 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
DDX23-217ENST00000553065 CC2D2AQ9P2K1 1620 aa21.24■□□□□ 0.99
DDX23-217ENST00000553065 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
DDX23-217ENST00000553065 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
DDX23-217ENST00000553065 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
DDX23-217ENST00000553065 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
DDX23-217ENST00000553065 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
DDX23-217ENST00000553065 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
DDX23-217ENST00000553065 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
DDX23-217ENST00000553065 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
DDX23-217ENST00000553065 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
DDX23-217ENST00000553065 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
DDX23-217ENST00000553065 NESP48681 1621 aa20.31■□□□□ 0.84
DDX23-217ENST00000553065 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
DDX23-217ENST00000553065 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
DDX23-217ENST00000553065 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
DDX23-217ENST00000553065 CUX2O14529 1486 aa20.14■□□□□ 0.81
DDX23-217ENST00000553065 WIZO95785 1651 aa20.13■□□□□ 0.81
DDX23-217ENST00000553065 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
DDX23-217ENST00000553065 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
DDX23-217ENST00000553065 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
DDX23-217ENST00000553065 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
DDX23-217ENST00000553065 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
DDX23-217ENST00000553065 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
DDX23-217ENST00000553065 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
DDX23-217ENST00000553065 CFTRP13569 1480 aa19.81■□□□□ 0.76
DDX23-217ENST00000553065 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
DDX23-217ENST00000553065 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
DDX23-217ENST00000553065 WDR62O43379 1518 aa19.73■□□□□ 0.75
DDX23-217ENST00000553065 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
DDX23-217ENST00000553065 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
DDX23-217ENST00000553065 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
DDX23-217ENST00000553065 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
DDX23-217ENST00000553065 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
DDX23-217ENST00000553065 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
DDX23-217ENST00000553065 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
DDX23-217ENST00000553065 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
DDX23-217ENST00000553065 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
DDX23-217ENST00000553065 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
DDX23-217ENST00000553065 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
DDX23-217ENST00000553065 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
DDX23-217ENST00000553065 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.673e-9■■■□□ 15.5
DDX23-217ENST00000553065 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
DDX23-217ENST00000553065 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
DDX23-217ENST00000553065 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
DDX23-217ENST00000553065 SOGA1O94964 1423 aa19.16■□□□□ 0.66
DDX23-217ENST00000553065 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
DDX23-217ENST00000553065 CUX1P39880 1505 aa19.15■□□□□ 0.66
DDX23-217ENST00000553065 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
DDX23-217ENST00000553065 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
DDX23-217ENST00000553065 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
DDX23-217ENST00000553065 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
DDX23-217ENST00000553065 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
DDX23-217ENST00000553065 FBLN2P98095 1184 aa19.01■□□□□ 0.63
DDX23-217ENST00000553065 ARHGEF11O15085 1522 aa18.99■□□□□ 0.63
DDX23-217ENST00000553065 CHD1O14646 1710 aa18.98■□□□□ 0.63
DDX23-217ENST00000553065 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
DDX23-217ENST00000553065 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
DDX23-217ENST00000553065 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
DDX23-217ENST00000553065 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
DDX23-217ENST00000553065 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
DDX23-217ENST00000553065 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
DDX23-217ENST00000553065 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
DDX23-217ENST00000553065 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
DDX23-217ENST00000553065 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
DDX23-217ENST00000553065 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
DDX23-217ENST00000553065 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
DDX23-217ENST00000553065 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
DDX23-217ENST00000553065 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
DDX23-217ENST00000553065 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
DDX23-217ENST00000553065 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
DDX23-217ENST00000553065 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
DDX23-217ENST00000553065 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
DDX23-217ENST00000553065 GRIN2AQ12879 1464 aa18.68■□□□□ 0.58
DDX23-217ENST00000553065 NUP160Q12769 1436 aa18.66■□□□□ 0.58
DDX23-217ENST00000553065 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
DDX23-217ENST00000553065 ADAMTS12P58397 1594 aa18.64■□□□□ 0.58
DDX23-217ENST00000553065 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.57
DDX23-217ENST00000553065 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
DDX23-217ENST00000553065 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
DDX23-217ENST00000553065 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
DDX23-217ENST00000553065 IGF1RP08069 1367 aa18.57■□□□□ 0.56
DDX23-217ENST00000553065 JPH4Q96JJ6 628 aa18.52■□□□□ 0.56
DDX23-217ENST00000553065 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
DDX23-217ENST00000553065 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
DDX23-217ENST00000553065 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms