RNA–Protein interactions for RNA: ENST00000552985.5

TPCN1-223, Transcript of two pore segment channel 1, humanhuman

TSL 3

Gene TPCN1, Length 762 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-223ENST00000552985 NISCHQ9Y2I1 1504 aa27.51■■■□□ 2
TPCN1-223ENST00000552985 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
TPCN1-223ENST00000552985 ABCC9O60706 1549 aa24.05■■□□□ 1.44
TPCN1-223ENST00000552985 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
TPCN1-223ENST00000552985 NACADO15069 1562 aa23.01■■□□□ 1.27
TPCN1-223ENST00000552985 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
TPCN1-223ENST00000552985 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
TPCN1-223ENST00000552985 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
TPCN1-223ENST00000552985 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
TPCN1-223ENST00000552985 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
TPCN1-223ENST00000552985 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
TPCN1-223ENST00000552985 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
TPCN1-223ENST00000552985 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
TPCN1-223ENST00000552985 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
TPCN1-223ENST00000552985 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
TPCN1-223ENST00000552985 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
TPCN1-223ENST00000552985 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
TPCN1-223ENST00000552985 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
TPCN1-223ENST00000552985 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
TPCN1-223ENST00000552985 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TPCN1-223ENST00000552985 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
TPCN1-223ENST00000552985 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
TPCN1-223ENST00000552985 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
TPCN1-223ENST00000552985 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
TPCN1-223ENST00000552985 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
TPCN1-223ENST00000552985 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
TPCN1-223ENST00000552985 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
TPCN1-223ENST00000552985 WIZO95785 1651 aa21.01■□□□□ 0.95
TPCN1-223ENST00000552985 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
TPCN1-223ENST00000552985 NESP48681 1621 aa20.81■□□□□ 0.92
TPCN1-223ENST00000552985 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
TPCN1-223ENST00000552985 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
TPCN1-223ENST00000552985 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
TPCN1-223ENST00000552985 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
TPCN1-223ENST00000552985 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
TPCN1-223ENST00000552985 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
TPCN1-223ENST00000552985 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
TPCN1-223ENST00000552985 CFTRP13569 1480 aa20.5■□□□□ 0.87
TPCN1-223ENST00000552985 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
TPCN1-223ENST00000552985 CUX2O14529 1486 aa20.48■□□□□ 0.87
TPCN1-223ENST00000552985 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
TPCN1-223ENST00000552985 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
TPCN1-223ENST00000552985 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
TPCN1-223ENST00000552985 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
TPCN1-223ENST00000552985 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
TPCN1-223ENST00000552985 WDR62O43379 1518 aa20.29■□□□□ 0.84
TPCN1-223ENST00000552985 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
TPCN1-223ENST00000552985 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
TPCN1-223ENST00000552985 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
TPCN1-223ENST00000552985 ABCC8Q09428 1581 aa20■□□□□ 0.79
TPCN1-223ENST00000552985 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
TPCN1-223ENST00000552985 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
TPCN1-223ENST00000552985 CUX1P39880 1505 aa19.92■□□□□ 0.78
TPCN1-223ENST00000552985 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
TPCN1-223ENST00000552985 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
TPCN1-223ENST00000552985 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
TPCN1-223ENST00000552985 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
TPCN1-223ENST00000552985 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
TPCN1-223ENST00000552985 SOGA1O94964 1423 aa19.81■□□□□ 0.76
TPCN1-223ENST00000552985 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
TPCN1-223ENST00000552985 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
TPCN1-223ENST00000552985 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
TPCN1-223ENST00000552985 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
TPCN1-223ENST00000552985 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
TPCN1-223ENST00000552985 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
TPCN1-223ENST00000552985 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
TPCN1-223ENST00000552985 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
TPCN1-223ENST00000552985 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
TPCN1-223ENST00000552985 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
TPCN1-223ENST00000552985 CHD1O14646 1710 aa19.59■□□□□ 0.73
TPCN1-223ENST00000552985 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.73
TPCN1-223ENST00000552985 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
TPCN1-223ENST00000552985 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
TPCN1-223ENST00000552985 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
TPCN1-223ENST00000552985 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
TPCN1-223ENST00000552985 FBLN2P98095 1184 aa19.52■□□□□ 0.72
TPCN1-223ENST00000552985 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
TPCN1-223ENST00000552985 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
TPCN1-223ENST00000552985 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
TPCN1-223ENST00000552985 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
TPCN1-223ENST00000552985 ERICH3Q5RHP9 1530 aa19.39■□□□□ 0.69
TPCN1-223ENST00000552985 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
TPCN1-223ENST00000552985 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
TPCN1-223ENST00000552985 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
TPCN1-223ENST00000552985 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
TPCN1-223ENST00000552985 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
TPCN1-223ENST00000552985 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
TPCN1-223ENST00000552985 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
TPCN1-223ENST00000552985 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
TPCN1-223ENST00000552985 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
TPCN1-223ENST00000552985 IGF1RP08069 1367 aa19.27■□□□□ 0.68
TPCN1-223ENST00000552985 CEP170Q5SW79 1584 aa19.27■□□□□ 0.67
TPCN1-223ENST00000552985 NUP160Q12769 1436 aa19.25■□□□□ 0.67
TPCN1-223ENST00000552985 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
TPCN1-223ENST00000552985 CUL7Q14999 1698 aa19.2■□□□□ 0.66
TPCN1-223ENST00000552985 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
TPCN1-223ENST00000552985 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
TPCN1-223ENST00000552985 CARMIL1Q5VZK9 1371 aa19.15■□□□□ 0.66
TPCN1-223ENST00000552985 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
TPCN1-223ENST00000552985 SHROOM2Q13796 1616 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms