RNA–Protein interactions for RNA: ENST00000552802.5

DDX23-216, Transcript of DEAD-box helicase 23, humanhuman

TSL 5

Gene DDX23, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-216ENST00000552802 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
DDX23-216ENST00000552802 ABCC9O60706 1549 aa22.05■■□□□ 1.12
DDX23-216ENST00000552802 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
DDX23-216ENST00000552802 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
DDX23-216ENST00000552802 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
DDX23-216ENST00000552802 NACADO15069 1562 aa20.68■□□□□ 0.9
DDX23-216ENST00000552802 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
DDX23-216ENST00000552802 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
DDX23-216ENST00000552802 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
DDX23-216ENST00000552802 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
DDX23-216ENST00000552802 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
DDX23-216ENST00000552802 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
DDX23-216ENST00000552802 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
DDX23-216ENST00000552802 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
DDX23-216ENST00000552802 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
DDX23-216ENST00000552802 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
DDX23-216ENST00000552802 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
DDX23-216ENST00000552802 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
DDX23-216ENST00000552802 ERCC6Q03468 1493 aa19.08■□□□□ 0.64
DDX23-216ENST00000552802 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
DDX23-216ENST00000552802 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
DDX23-216ENST00000552802 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
DDX23-216ENST00000552802 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
DDX23-216ENST00000552802 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
DDX23-216ENST00000552802 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
DDX23-216ENST00000552802 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
DDX23-216ENST00000552802 NESP48681 1621 aa18.9■□□□□ 0.62
DDX23-216ENST00000552802 CUX2O14529 1486 aa18.9■□□□□ 0.62
DDX23-216ENST00000552802 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
DDX23-216ENST00000552802 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
DDX23-216ENST00000552802 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
DDX23-216ENST00000552802 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
DDX23-216ENST00000552802 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
DDX23-216ENST00000552802 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
DDX23-216ENST00000552802 WIZO95785 1651 aa18.64■□□□□ 0.57
DDX23-216ENST00000552802 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
DDX23-216ENST00000552802 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
DDX23-216ENST00000552802 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
DDX23-216ENST00000552802 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
DDX23-216ENST00000552802 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
DDX23-216ENST00000552802 WDR62O43379 1518 aa18.39■□□□□ 0.53
DDX23-216ENST00000552802 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
DDX23-216ENST00000552802 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
DDX23-216ENST00000552802 CFTRP13569 1480 aa18.29■□□□□ 0.52
DDX23-216ENST00000552802 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
DDX23-216ENST00000552802 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
DDX23-216ENST00000552802 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
DDX23-216ENST00000552802 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
DDX23-216ENST00000552802 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
DDX23-216ENST00000552802 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
DDX23-216ENST00000552802 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
DDX23-216ENST00000552802 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
DDX23-216ENST00000552802 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
DDX23-216ENST00000552802 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
DDX23-216ENST00000552802 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
DDX23-216ENST00000552802 FBLN2P98095 1184 aa17.88■□□□□ 0.45
DDX23-216ENST00000552802 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
DDX23-216ENST00000552802 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
DDX23-216ENST00000552802 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
DDX23-216ENST00000552802 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.456e-7■■■□□ 18.6
DDX23-216ENST00000552802 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
DDX23-216ENST00000552802 CHD1O14646 1710 aa17.82■□□□□ 0.44
DDX23-216ENST00000552802 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
DDX23-216ENST00000552802 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
DDX23-216ENST00000552802 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
DDX23-216ENST00000552802 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
DDX23-216ENST00000552802 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
DDX23-216ENST00000552802 SOGA1O94964 1423 aa17.76■□□□□ 0.43
DDX23-216ENST00000552802 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
DDX23-216ENST00000552802 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
DDX23-216ENST00000552802 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
DDX23-216ENST00000552802 CUX1P39880 1505 aa17.69■□□□□ 0.42
DDX23-216ENST00000552802 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
DDX23-216ENST00000552802 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
DDX23-216ENST00000552802 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
DDX23-216ENST00000552802 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
DDX23-216ENST00000552802 WDR97A6NE52 1622 aa17.58■□□□□ 0.41
DDX23-216ENST00000552802 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
DDX23-216ENST00000552802 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
DDX23-216ENST00000552802 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
DDX23-216ENST00000552802 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
DDX23-216ENST00000552802 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
DDX23-216ENST00000552802 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
DDX23-216ENST00000552802 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
DDX23-216ENST00000552802 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
DDX23-216ENST00000552802 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
DDX23-216ENST00000552802 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
DDX23-216ENST00000552802 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
DDX23-216ENST00000552802 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
DDX23-216ENST00000552802 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
DDX23-216ENST00000552802 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
DDX23-216ENST00000552802 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
DDX23-216ENST00000552802 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
DDX23-216ENST00000552802 NUP160Q12769 1436 aa17.26■□□□□ 0.35
DDX23-216ENST00000552802 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
DDX23-216ENST00000552802 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
DDX23-216ENST00000552802 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
DDX23-216ENST00000552802 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
DDX23-216ENST00000552802 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
DDX23-216ENST00000552802 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 272.3 ms